FC873743

Overview
NameFC873743
Unique NameFC873743
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length771
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MK13_RAT (Mitogen-activated protein kinase 13 OS=Rattus norvegicus GN=Mapk13 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.619e-11
Identity = 51/145 (35.17%), Postives = 76/145 (52.41%), Query Frame = 3
Query:  336 SYMAERVVGTGSFGIVFQAKCLETGETVAIKK--------VLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTS-KDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            +Y+A   VG+G++G V  A    TGE VAIKK        +   R Y  REL L++ M H NVI L   +   TS ++     LVM ++   + +++    S  +      V+   YQ+ +GL YIH+  G+ HRD+KP NL V+
Sbjct:   24 TYLAPAHVGSGAYGAVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAY--RELLLLKHMHHENVIGLLDVYTPATSVRNFQDFYLVMPFMQTDLQKIMGMEFSEEK------VQYLVYQMLKGLKYIHSA-GIVHRDLKPGNLAVN 159          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MK13_MOUSE (Mitogen-activated protein kinase 13 OS=Mus musculus GN=Mapk13 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.619e-11
Identity = 51/145 (35.17%), Postives = 75/145 (51.72%), Query Frame = 3
Query:  336 SYMAERVVGTGSFGIVFQAKCLETGETVAIKK--------VLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            +Y+A   VG+G++G V  A    TGE VAIKK        +   R Y  REL L++ M H NVI L   F   +S        LVM ++   + +++    S ++      V+   YQ+ +GL YIH+  G+ HRD+KP NL V+
Sbjct:   24 TYLAPAHVGSGAYGAVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAY--RELLLLKHMHHENVIGLLDVFTPASSLRSFHDFYLVMPFMQTDLQKIMGMEFSEDK------VQYLVYQMLKGLKYIHSA-GIVHRDLKPGNLAVN 159          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MK12_DANRE (Mitogen-activated protein kinase 12 OS=Danio rerio GN=mapk12 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.619e-11
Identity = 51/144 (35.42%), Postives = 73/144 (50.69%), Query Frame = 3
Query:  339 YMAERVVGTGSFGIVFQAKCLETGETVAIKK--------VLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            Y   + VGTG++G V  A    TG  VAIKK        +   R Y  REL+L++ M H NVI L   F +  S D      LVM ++   + +++K      +R     V+   YQ+ +GL YIH   G+ HRD+KP NL ++
Sbjct:   25 YKDLKQVGTGAYGTVCYALDRRTGAKVAIKKLHRPFQSDLFAKRAY--RELRLLKHMKHDNVIGLVDVFTADLSLDRFHDFYLVMPFMGTDLGKLMKMERLSEER-----VQYLVYQMLKGLKYIHAA-GIIHRDLKPGNLAIN 160          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: CIPKB_ORYSJ (CBL-interacting protein kinase 11 OS=Oryza sativa subsp. japonica GN=CIPK11 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.619e-11
Identity = 48/144 (33.33%), Postives = 77/144 (53.47%), Query Frame = 3
Query:  339 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP--ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            Y   + +G G+F  V+ A+ L TG+ VAIK + +D+  K        RE+ +MRL+ HPNV+ L   F    SK +++   V+EY    E   ++ K       ++     + Y +Q+   + Y H+  GV HRD+KP+NLL+D
Sbjct:   12 YEVGKQLGQGTFAKVYYARNLTTGQAVAIKMINKDKVMKVGLMEQIKREISIMRLVKHPNVLQL---FEVMASKSKIY--FVLEYAKGGELFNKIAK-----EGKLSEDSARRYFHQLINAVDYCHS-RGVYHRDLKPENLLLD 144          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: CDKL1_DANRE (Cyclin-dependent kinase-like 1 OS=Danio rerio GN=cdkl1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.619e-11
Identity = 41/134 (30.60%), Postives = 74/134 (55.22%), Query Frame = 3
Query:  357 VGTGSFGIVFQAKCLETGETVAIKKVLQD------RRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLV 740
            +G GS+G+VF+ +  +TG+ VAIKK ++       ++   RE+++++ + HPN+++L   F     + +  L+LV EY   T+   L  Y    + +P   VK   +Q  + + + H      HRDVKP+N+L+
Sbjct:   10 IGEGSYGVVFKCRNKDTGQIVAIKKFVESEDDPIIKKIALREIRMLKQLKHPNLVNLMEVF-----RRKRKLHLVFEYCDHTVLNELDRYP---RGVPEHMVKSIIWQTLQAVNFCHK-QNCIHRDVKPENILI 134          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: SSK22_YEAST (Serine/threonine-protein kinase SSK22 OS=Saccharomyces cerevisiae GN=SSK22 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 3.421e-11
Identity = 47/191 (24.61%), Postives = 91/191 (47.64%), Query Frame = 3
Query:  195 DLLKRHRPDMDSDKEMSAAVIQGNDAVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKV-LQDRRYKNR-------ELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            + +K     M  +      V+   D    +++S      N     ++ +     +G G+FG V+ A  LE GE +A+K++ + D     +       E+ ++ +++HPN++     +     +D+  +N+ MEY        L  +  +   M     ++YT+++  GLAY+H   GV HRD+KP+N+L+D
Sbjct:  990 EAIKTLEKTMKRNPRQMGKVLDATDQGNKYLLSLASSLSN----VSMRWQKRSFIGGGTFGQVYSAINLENGEILAVKEIKIHDTTTMKKIFPLIKEEMTVLEMLNHPNIVQY---YGVEVHRDK--VNIFMEYCEGGSLASLLDHGRIEDEM---VTQVYTFELLEGLAYLHQ-SGVVHRDIKPENILLD 1167          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: NTF6_TOBAC (Mitogen-activated protein kinase homolog NTF6 OS=Nicotiana tabacum GN=NTF6 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.421e-11
Identity = 43/135 (31.85%), Postives = 75/135 (55.56%), Query Frame = 3
Query:  357 VGTGSFGIVFQAKCLETGETVAIKKVLQ------DRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            VG G++G+V  A   ET E VAIKK+        D +   RE++L+  MDH N+I +K        ++   + +V E +   ++++++     +Q +   + + + YQ+ RGL Y+H+   V HRD+KP NLL++
Sbjct:   44 VGRGAYGMVCCATNSETKEEVAIKKIGNAFENRIDAKRTLREIKLLSHMDHENIIKIKDIVRPPDREEFNDVYIVYELMDTDLHQIIR----SSQALTDDHCQYFLYQLLRGLKYVHSA-NVLHRDLKPSNLLLN 173          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MPKC_ASPNC (Mitogen-activated protein kinase mpkC OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=mpkC PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.421e-11
Identity = 49/146 (33.56%), Postives = 80/146 (54.79%), Query Frame = 3
Query:  330 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD--------RRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            T  Y   + VG G+FG+V  A  + T + VAIKK+++         R Y  RE++L++ + H N+I L   F S        + LV + +   + R+L      ++ +   +V+ +TYQ+ RGL YIH+  GV HRD+KP N+L++
Sbjct:   17 TNRYSDLQPVGLGAFGLVCSAYDMITRQPVAIKKMMKPFSNATLAKRTY--REVKLLKHLRHENLIGLSDIFISPLED----VYLVTDLLGTDLNRLLT-----SKPLDGKFVQYFTYQLLRGLKYIHSA-GVIHRDLKPSNILIN 150          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: HOG1_ASHGO (Mitogen-activated protein kinase HOG1 OS=Ashbya gossypii GN=HOG1 PE=3 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 3.421e-11
Identity = 49/137 (35.77%), Postives = 73/137 (53.28%), Query Frame = 3
Query:  357 VGTGSFGIVFQAKCLETGETVAIKK--------VLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            VG G+FG+V  A    T + VAIKK        VL  R Y  REL+L++ + H N+I L+  F S        +  V E     ++R+L+      Q     +++ + YQI RGL Y+H+  GV HRD+KP N+L++
Sbjct:   29 VGMGAFGLVCSAVDTYTQQPVAIKKIMKPFSTAVLAKRTY--RELKLLKHLRHENLICLEDIFLSPLED----IYFVTELQGTDLHRLLQTRPLEKQ-----FLQYFLYQILRGLKYVHSA-GVIHRDLKPSNILIN 153          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: CIPKS_ORYSJ (CBL-interacting protein kinase 28 OS=Oryza sativa subsp. japonica GN=CIPK28 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 3.421e-11
Identity = 45/142 (31.69%), Postives = 78/142 (54.93%), Query Frame = 3
Query:  339 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            Y+  R +G G+FG V+ A+ L +G++VAIK + +++  K        RE+ +MRL+ HPNV+ L   F    +K  ++  L      E  +++ +  + +N+       + Y  Q+   + Y H+  GV HRD+KP+NLL+D
Sbjct:   11 YVIGRQLGQGTFGKVYYARNLSSGQSVAIKMIDKEKILKVGLMEQIKREISIMRLVRHPNVLQL---FEVMATKSNIYFALEYAKGGELFHKMAR--AKLNEES----ARNYFQQLISAMDYCHS-RGVYHRDLKPENLLLD 142          
The following BLAST results are available for this feature:
BLAST of FC873743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 247
Match NameE-valueIdentityDescription
MK13_RAT2.619e-1135.17Mitogen-activated protein kinase 13 OS=Rattus norv... [more]
MK13_MOUSE2.619e-1135.17Mitogen-activated protein kinase 13 OS=Mus musculu... [more]
MK12_DANRE2.619e-1135.42Mitogen-activated protein kinase 12 OS=Danio rerio... [more]
CIPKB_ORYSJ2.619e-1133.33CBL-interacting protein kinase 11 OS=Oryza sativa ... [more]
CDKL1_DANRE2.619e-1130.60Cyclin-dependent kinase-like 1 OS=Danio rerio GN=c... [more]
SSK22_YEAST3.421e-1124.61Serine/threonine-protein kinase SSK22 OS=Saccharom... [more]
NTF6_TOBAC3.421e-1131.85Mitogen-activated protein kinase homolog NTF6 OS=N... [more]
MPKC_ASPNC3.421e-1133.56Mitogen-activated protein kinase mpkC OS=Aspergill... [more]
HOG1_ASHGO3.421e-1135.77Mitogen-activated protein kinase HOG1 OS=Ashbya go... [more]
CIPKS_ORYSJ3.421e-1131.69CBL-interacting protein kinase 28 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2AA12FM1 AbsDev Citrus clementina cDNA clone KN0AAI2AA12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873743 ID=FC873743; Name=FC873743; organism=Citrus clementina; type=EST; length=771bp
AAAGCAAAGCGAATAAGAAAGAAAAGAGGGGAGAGAGAGGGAGAGAGAGA
GTGAGTGTATGTGTATTGAATTGAGAGTTTGAAGCTGTAGCAGCTGTAAC
CCACATGGCTTCAATGCCCTTGGGGCCTCAGCCTCAGCCACCGCCGCCAC
CACAAGCACAAGCCCCACCATCGCAGCAACCGCACTTCGACAATGACCTG
CTGAAACGACACCGTCCGGATATGGACTCCGACAAGGAAATGTCAGCTGC
AGTTATTCAGGGGAATGATGCTGTCACTGGCCACATCATTTCTACCACAA
TTGGAGGCAAAAATGGCGAACCCAAGCAGACGATCAGTTACATGGCAGAG
CGTGTTGTTGGTACTGGATCATTCGGTATCGTTTTTCAGGCAAAATGCTT
GGAAACTGGAGAGACAGTGGCTATAAAAAAGGTCTTGCAAGACAGGCGGT
ATAAAAATCGTGAACTGCAGTTAATGCGTTTGATGGATCACCCGAATGTG
ATTTCCCTTAAGCATTGTTTCTTCTCCACAACAAGTAAAGATGAGCTTTT
TTTGAATTTGGTTATGGAATATGTTCCTGAGACTATGTACCGGGTGCTGA
AGCATTACAGCAGTATGAACCAGAGGATGCCCCTCATCTATGTAAAACTG
TATACATATCAAATCTTTAGGGGCTTGGCATATATTCATACAGTTCCTGG
GGTCTGCCATAGGGATGTGAAGCCTCAAAACCTCTTGGTTGATCCACTCA
CCCACCGGTTAAGCTTTGTGA
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