FC873743

Overview
NameFC873743
Unique NameFC873743
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length771
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: PEF1_SCHPO (Serine/threonine-protein kinase pef1 OS=Schizosaccharomyces pombe GN=pef1 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 4.468e-11
Identity = 45/142 (31.69%), Postives = 77/142 (54.23%), Query Frame = 3
Query:  333 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-----RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            ++Y     +G G++  V++ +   TGE VA+K +  D          RE+ LM+ + HPN++SL     S   + E  L LV EY+ + + + +  Y +    +P   VK +T Q+ +G+++ H    V HRD+KPQNLL++
Sbjct:    1 MNYQRLEKLGEGTYAHVYKGQNRVTGEIVALKVIRIDADEGTPSTAIREISLMKELRHPNIMSL-----SDVLQTENKLMLVFEYMEKDLKKYMDTYGNQGA-LPPSQVKNFTQQLLKGISFCHE-NRVLHRDLKPQNLLIN 135          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MK12_HUMAN (Mitogen-activated protein kinase 12 OS=Homo sapiens GN=MAPK12 PE=1 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 4.468e-11
Identity = 47/136 (34.56%), Postives = 71/136 (52.21%), Query Frame = 3
Query:  357 VGTGSFGIVFQAKCLETGETVAIKKVLQD------RRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            VG+G++G V  A    TG  VAIKK+ +        +   REL+L++ M H NVI L   F    + D+     LVM ++   + +++KH      R     ++   YQ+ +GL YIH   G+ HRD+KP NL V+
Sbjct:   33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDR-----IQFLVYQMLKGLRYIHAA-GIIHRDLKPGNLAVN 162          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: CDKF3_ORYSJ (Cyclin-dependent kinase F-3 OS=Oryza sativa subsp. japonica GN=CDKF-3 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.468e-11
Identity = 47/147 (31.97%), Postives = 78/147 (53.06%), Query Frame = 3
Query:  339 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQ-----DRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHRLS 764
            Y   R +G G+ G VF+A   ET E VA+KK+ +     +     RE++ ++ ++HPN++ LK     T    ELF   + E +   +Y V++   +         ++ +  QI +GLAY+H   G  HRD+KP+NLLV   T +++
Sbjct:    4 YKVIREIGDGTCGNVFRAYNTETNEIVAVKKMKRKFFQWEECISLREVKALQKLNHPNIVKLKEV---TMENHELFF--IFENMECNLYDVIRERQAAFSEEE---IRNFMVQILQGLAYMHN-NGYFHRDLKPENLLVTDGTVKIA 141          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: CDKE1_ORYSJ (Cyclin-dependent kinase E-1 OS=Oryza sativa subsp. japonica GN=CDKE-1 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 4.468e-11
Identity = 45/165 (27.27%), Postives = 79/165 (47.88%), Query Frame = 3
Query:  300 IGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLET-----------GETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHY-SSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLV 740
            +GG    P     Y     +G G++G+VF A+  ++           G  +AIKK  Q +          RE+ L+R ++H NV+ L +   +     ++ L L  +Y    +Y +++H+   +N  +    VK   +Q+  GL Y+H+   + HRD+KP N+LV
Sbjct:    6 VGGGTNRPAWLQQYELVGKIGEGTYGLVFLARLKQSHPHAAAGVGRRGSPIAIKKFKQSKEGDGVSPTAIREIMLLREINHENVVKLVNVHINHA---DMSLYLAFDYAEHDLYEIIRHHREKLNLPINPYTVKSLLWQLLNGLNYLHS-NWIIHRDLKPSNILV 166          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: CDK5_GLOMM (Cell division protein kinase 5 homolog OS=Glossina morsitans morsitans GN=Cdk5 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.468e-11
Identity = 44/135 (32.59%), Postives = 74/135 (54.81%), Query Frame = 3
Query:  357 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            +G G++G VF+ +  ET E VA+K+V  D   +       RE+ L++ + H N++ L     S     E  L LV E+  + +    K++ S+N  + +   + +  Q+ RGLA+ H+   V HRD+KPQNLL++
Sbjct:   10 IGEGTYGTVFKGRNRETLEIVALKRVRLDEDDEGVPSSALREICLLKELKHKNIVRLYDVLHS-----EKKLTLVFEHCDQDLK---KYFDSLNGDIDMAVCRSFMLQLLRGLAFCHS-HNVLHRDLKPQNLLIN 135          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MKH1_SCHPO (MAP kinase kinase kinase mkh1 OS=Schizosaccharomyces pombe GN=mkh1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.835e-11
Identity = 47/166 (28.31%), Postives = 86/166 (51.81%), Query Frame = 3
Query:  291 STTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKV--------LQDRRYK------NRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            +T   G       T  +M   ++G G++G VF A  + TGE +A+K+V          D+  K      N E+ ++  +DH N++  ++  F  T  D   +++ +EYV   ++ R L++Y    +++    V+  + Q+  GL+Y+H+  G+ HRD+K  NLL+D
Sbjct:  809 TTITSGSVVSQNATFKWMKGELIGNGTYGKVFLAMNINTGELIAVKQVEIPQTINGRHDQLRKDIVDSINAEISMIADLDHLNIV--QYLGFEKTETD---ISIFLEYVSGGSIGRCLRNYGPFEEQL----VRFVSRQVLYGLSYLHS-KGIIHRDLKADNLLID 964          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: JNK_SUBDO (Stress-activated protein kinase JNK OS=Suberites domuncula GN=JNK PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.835e-11
Identity = 45/135 (33.33%), Postives = 77/135 (57.04%), Query Frame = 3
Query:  357 VGTGSFGIVFQAKCLETGETVAIKKVL---QDRRYKNR---ELQLMRLMDHPNVISLKHCFFSTTSKDEL-FLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLV 740
            +G+G+ G+V  A    T E +AIKK++   Q+  Y  R   EL+LM+++DH N+I LK+ F    S D+   + +VME +   + RV+      ++   L+      YQ+  G+ ++H+  G+ HRD+KP N++V
Sbjct:   28 IGSGAQGVVCSAFDTVTQEKIAIKKLVKPFQNETYAKRAFRELRLMKMVDHKNIIGLKNLFTPAKSLDDFQDVYIVMELMDANLCRVIGIELDHDRMSYLL------YQLLCGIKHLHSA-GIIHRDLKPSNIVV 155          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: HOG1_TORDE (Mitogen-activated protein kinase HOG1 OS=Torulaspora delbrueckii GN=HOG1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.835e-11
Identity = 49/137 (35.77%), Postives = 72/137 (52.55%), Query Frame = 3
Query:  357 VGTGSFGIVFQAKCLETGETVAIKK--------VLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            VG G+FG+V  A      + VAIKK        VL  R Y  REL+L++ + H N+I L+  F S        +  V E     ++R+L+      Q     +V+ + YQI RGL Y+H+  GV HRD+KP N+L++
Sbjct:   29 VGMGAFGLVCSATDTLAQQPVAIKKIMKPFSTAVLAKRTY--RELKLLKHLRHENLICLQDIFLSPLED----IYFVTELQGTDLHRLLQTRPLEKQ-----FVQYFLYQILRGLKYVHSA-GVIHRDLKPSNILIN 153          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: CDK5_RAT (Cell division protein kinase 5 OS=Rattus norvegicus GN=Cdk5 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.835e-11
Identity = 45/135 (33.33%), Postives = 72/135 (53.33%), Query Frame = 3
Query:  357 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            +G G++G VF+AK  ET E VA+K+V  D   +       RE+ L++ + H N++ L     S        L LV E+  + +    K++ S N  +    VK   +Q+ +GL + H+   V HRD+KPQNLL++
Sbjct:   10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKK-----LTLVFEFCDQDLK---KYFDSCNGDLDPEIVKSLLFQLLKGLGFCHS-RNVLHRDLKPQNLLIN 135          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: CDK10_DICDI (Probable cyclin-dependent kinase 10 OS=Dictyostelium discoideum GN=cdk10 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.835e-11
Identity = 43/145 (29.66%), Postives = 81/145 (55.86%), Query Frame = 3
Query:  324 KQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-------RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLL 737
            +  +S+     +G G++GIV + +  ETG  VA+KKV   ++ K+       RE+Q+++ + HPN++SL      +T  D+++  LV EY+   +  ++    ++N+   L  +K +  Q+ R + Y+H+   + HRD+K  NLL
Sbjct:    2 RSVLSFEKLDSIGEGTYGIVSKGRDKETGRIVALKKVKIGQQDKDGIPLTSLREIQILKEIKHPNIVSLLEVVIGSTG-DKIY--LVFEYLEHDVASLI---DNINKPFKLSEIKCFLLQLLRAVEYLHS-HWIIHRDLKCSNLL 139          
The following BLAST results are available for this feature:
BLAST of FC873743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 247
Match NameE-valueIdentityDescription
PEF1_SCHPO4.468e-1131.69Serine/threonine-protein kinase pef1 OS=Schizosacc... [more]
MK12_HUMAN4.468e-1134.56Mitogen-activated protein kinase 12 OS=Homo sapien... [more]
CDKF3_ORYSJ4.468e-1131.97Cyclin-dependent kinase F-3 OS=Oryza sativa subsp.... [more]
CDKE1_ORYSJ4.468e-1127.27Cyclin-dependent kinase E-1 OS=Oryza sativa subsp.... [more]
CDK5_GLOMM4.468e-1132.59Cell division protein kinase 5 homolog OS=Glossina... [more]
MKH1_SCHPO5.835e-1128.31MAP kinase kinase kinase mkh1 OS=Schizosaccharomyc... [more]
JNK_SUBDO5.835e-1133.33Stress-activated protein kinase JNK OS=Suberites d... [more]
HOG1_TORDE5.835e-1135.77Mitogen-activated protein kinase HOG1 OS=Torulaspo... [more]
CDK5_RAT5.835e-1133.33Cell division protein kinase 5 OS=Rattus norvegicu... [more]
CDK10_DICDI5.835e-1129.66Probable cyclin-dependent kinase 10 OS=Dictyosteli... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2AA12FM1 AbsDev Citrus clementina cDNA clone KN0AAI2AA12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873743 ID=FC873743; Name=FC873743; organism=Citrus clementina; type=EST; length=771bp
AAAGCAAAGCGAATAAGAAAGAAAAGAGGGGAGAGAGAGGGAGAGAGAGA
GTGAGTGTATGTGTATTGAATTGAGAGTTTGAAGCTGTAGCAGCTGTAAC
CCACATGGCTTCAATGCCCTTGGGGCCTCAGCCTCAGCCACCGCCGCCAC
CACAAGCACAAGCCCCACCATCGCAGCAACCGCACTTCGACAATGACCTG
CTGAAACGACACCGTCCGGATATGGACTCCGACAAGGAAATGTCAGCTGC
AGTTATTCAGGGGAATGATGCTGTCACTGGCCACATCATTTCTACCACAA
TTGGAGGCAAAAATGGCGAACCCAAGCAGACGATCAGTTACATGGCAGAG
CGTGTTGTTGGTACTGGATCATTCGGTATCGTTTTTCAGGCAAAATGCTT
GGAAACTGGAGAGACAGTGGCTATAAAAAAGGTCTTGCAAGACAGGCGGT
ATAAAAATCGTGAACTGCAGTTAATGCGTTTGATGGATCACCCGAATGTG
ATTTCCCTTAAGCATTGTTTCTTCTCCACAACAAGTAAAGATGAGCTTTT
TTTGAATTTGGTTATGGAATATGTTCCTGAGACTATGTACCGGGTGCTGA
AGCATTACAGCAGTATGAACCAGAGGATGCCCCTCATCTATGTAAAACTG
TATACATATCAAATCTTTAGGGGCTTGGCATATATTCATACAGTTCCTGG
GGTCTGCCATAGGGATGTGAAGCCTCAAAACCTCTTGGTTGATCCACTCA
CCCACCGGTTAAGCTTTGTGA
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