FC873743
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: CIPKB_ARATH (CBL-interacting serine/threonine-protein kinase 11 OS=Arabidopsis thaliana GN=CIPK11 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.953e-11 Identity = 49/145 (33.79%), Postives = 76/145 (52.41%), Query Frame = 3 Query: 339 YMAERVVGTGSFGIVFQAKCLETGETVAIK-----KVLQDRRYKN---RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP--ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743 Y +++G G+F VF A+ TG++VA+K K+L + N RE+ +MR + HPN++ L H +T SK + ME+V E ++ KH R+ + Y Q+ + Y H GV HRD+KP+NLL+D Sbjct: 21 YELGKLLGCGAFAKVFHARDRRTGQSVAVKILNKKKLLTNPALANNIKREISIMRRLSHPNIVKL-HEVMATKSK----IFFAMEFVKGGELFNKISKH-----GRLSEDLSRRYFQQLISAVGYCHA-RGVYHRDLKPENLLID 154
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: CDKL3_RAT (Cyclin-dependent kinase-like 3 OS=Rattus norvegicus GN=Cdkl3 PE=2 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 9.953e-11 Identity = 41/133 (30.83%), Postives = 70/133 (52.63%), Query Frame = 3 Query: 357 VGTGSFGIVFQAKCLETGETVAIKKVLQD-----RRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLV 740 VG GS+G V + K +TG VAIK + + RE++ ++ H N+++L F + + ++LV E++ T+ L+HY + L + Y +QI R + Y+H + HRD+KP+N+LV Sbjct: 10 VGEGSYGTVMKCKHKDTGRIVAIKIFYEKPEKSVNKIATREIKFLKQFRHENLVNLIEVF-----RQKKKIHLVFEFIDHTVLDELQHYCHGLESKRL---RKYLFQILRAIEYLHN-NNIIHRDIKPENILV 133
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: CDKL3_MOUSE (Cyclin-dependent kinase-like 3 OS=Mus musculus GN=Cdkl3 PE=2 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 9.953e-11 Identity = 41/133 (30.83%), Postives = 70/133 (52.63%), Query Frame = 3 Query: 357 VGTGSFGIVFQAKCLETGETVAIKKVLQD-----RRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLV 740 VG GS+G V + K +TG VAIK + + RE++ ++ H N+++L F + + ++LV E++ T+ L+HY + L + Y +QI R + Y+H + HRD+KP+N+LV Sbjct: 10 VGEGSYGTVMKCKHKDTGRIVAIKIFYEKPEKSVNKIATREIKFLKQFRHENLVNLIEVF-----RQKKKIHLVFEFIDHTVLDELQHYCHGLESKRL---RKYLFQILRAIEYLHN-NNIIHRDIKPENILV 133
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: CDK5_DROME (Cell division protein kinase 5 homolog OS=Drosophila melanogaster GN=Cdk5 PE=1 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 9.953e-11 Identity = 42/135 (31.11%), Postives = 73/135 (54.07%), Query Frame = 3 Query: 357 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743 +G G++G VF+ + +T E VA+K+V D + RE+ L++ + H N++ L S L LV E+ + + K++ S+N + + + + Q+ RGLA+ H+ V HRD+KPQNLL++ Sbjct: 10 IGEGTYGTVFKGRNRDTMEIVALKRVRLDEDDEGVPSSALREICLLKELKHKNIVRLIDVLHSDKK-----LTLVFEHCDQDLK---KYFDSLNGEIDMAVCRSFMLQLLRGLAFCHS-HNVLHRDLKPQNLLIN 135
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: CDC2_CAEBR (Cell division control protein 2 homolog OS=Caenorhabditis briggsae GN=cdk-1 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.953e-11 Identity = 42/135 (31.11%), Postives = 72/135 (53.33%), Query Frame = 3 Query: 357 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743 +G G++G+V++ + T VA+KK+ + + RE+ L++ + HPNV+ L+ E L L+ E++ + R + S + +P +K YT+QI + + + H V HRD+KPQNLLVD Sbjct: 22 IGEGTYGVVYKGRNRRTQAMVAMKKIRLESEDEGVPSTAVREISLLKELQHPNVVGLEAVIMQ-----ENRLYLIFEFLSYDLKRYMDTLSK-EEYLPSETLKSYTFQILQAMCFCHQ-RRVIHRDLKPQNLLVD 149
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: CDC2H_THEPA (Cell division control protein 2 homolog OS=Theileria parva GN=CRK2 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.953e-11 Identity = 42/135 (31.11%), Postives = 75/135 (55.56%), Query Frame = 3 Query: 357 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743 +G G++G+V++A+ GE A+KK+ + + RE+ L++ + HPN++ L+ S E L LV EY+ + + ++L + + + K + YQI RG++Y H + HRD+KPQNLL++ Sbjct: 10 IGEGTYGVVYKAQN-NHGEICALKKIRVEEEDEGIPSTAIREISLLKELHHPNIVWLRDVIHS-----EKCLTLVFEYLDQDLKKLL---DACDGGLEPTTAKSFLYQILRGISYCHD-HRILHRDLKPQNLLIN 134
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: CDC2H_THEAN (Cell division control protein 2 homolog OS=Theileria annulata GN=CRK2 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.953e-11 Identity = 42/135 (31.11%), Postives = 75/135 (55.56%), Query Frame = 3 Query: 357 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743 +G G++G+V++A+ GE A+KK+ + + RE+ L++ + HPN++ L+ S E L LV EY+ + + ++L + + + K + YQI RG++Y H + HRD+KPQNLL++ Sbjct: 10 IGEGTYGVVYKAQN-NHGEICALKKIRVEEEDEGIPSTAIREISLLKELHHPNIVWLRDVIHS-----EKCLTLVFEYLDQDLKKLL---DACDGGLEPTTAKSFLYQILRGISYCHD-HRILHRDLKPQNLLIN 134 The following BLAST results are available for this feature:
BLAST of FC873743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 247
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873743 ID=FC873743; Name=FC873743; organism=Citrus clementina; type=EST; length=771bpback to top |