FC873743

Overview
NameFC873743
Unique NameFC873743
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length771
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC873743_ssr41 microsatellite FC873743_ssr41:41..50. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig5940 contig Ccv1_Contig5940:15..785. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: GSK31_SCHPO (Protein kinase gsk31 OS=Schizosaccharomyces pombe GN=gsk31 PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.247e-37
Identity = 81/148 (54.73%), Postives = 110/148 (74.32%), Query Frame = 3
Query:  306 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFST--TSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            G  GE K+TISY   RV+G+GSFG+V QAK + T   +A+K+VLQD+RYKNRELQ+MR + HPN+I L   FF T   SKDE  L L++EY+PET++  ++ Y+   + +P + +KLY +Q+FR LAY+H+  GVCHRD+KPQNLLVD
Sbjct:   15 GTTGE-KKTISYEPCRVLGSGSFGVVIQAKLVGTPGFIAVKRVLQDKRYKNRELQIMRAISHPNIIKL-IAFFHTHNPSKDETHLCLLLEYMPETVFDDMRWYTRRRKSIPNLSIKLYAFQLFRALAYLHST-GVCHRDIKPQNLLVD 159          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MCK1_YEAST (Protein kinase MCK1 OS=Saccharomyces cerevisiae GN=MCK1 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.882e-26
Identity = 61/139 (43.88%), Postives = 91/139 (65.47%), Query Frame = 3
Query:  351 RVVGTGSFGIVFQAKCLETGET----VAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKD-ELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLT 752
            R +G G+FG V QA   +  +      AIKKV     YK+RELQ++R+ DHPN++ L++ F   + +D +++ +L ME +PET+   +  Y +    MPL +++LYTYQI RG+ Y+H + GVCHRD+KP N+LVDP T
Sbjct:   39 RKIGRGAFGTVVQAYLTQDKKNWLGPFAIKKVPAHTEYKSRELQILRIADHPNIVKLQYFFTHLSPQDNKVYQHLAMECLPETLQIEINRYVTNKLEMPLKHIRLYTYQIARGMLYLHGL-GVCHRDIKPSNVLVDPET 176          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: KOM8_YEAST (Probable serine/threonine-protein kinase YOL128C OS=Saccharomyces cerevisiae GN=YOL128C PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.928e-18
Identity = 51/138 (36.96%), Postives = 85/138 (61.59%), Query Frame = 3
Query:  357 VGTGSFGIVFQA----KCLETGETVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFS-TTSKDELFL---NLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDP 746
            +G GSFG V Q+      +E     AIK+V++  + ++ EL++++ + HPN+++L+  F S  T+KD   L   N VMEY+P+T+   +  Y     +MP  ++KLYT+QI R L  +H++  +CH D+KP N+L+ P
Sbjct:   47 IGHGSFGTVTQSILSSNSIEWLGPYAIKRVVKSPKVQSLELEILQNIRHPNLVTLEFFFESHCTTKDGGHLYQKNFVMEYIPQTLSSEIHEYFDNGSKMPTKHIKLYTFQILRALLTLHSM-SICHGDLKPSNILIIP 183          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MPK16_ARATH (Mitogen-activated protein kinase 16 OS=Arabidopsis thaliana GN=MPK16 PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.873e-17
Identity = 49/141 (34.75%), Postives = 81/141 (57.45%), Query Frame = 3
Query:  339 YMAERVVGTGSFGIVFQAKCLETGETVAIKKV------LQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            Y  E V+G GS+G+V  A    TGE VAIKK+      + D     RE++L+RL+ HP+++ +KH     + ++   + +V E +   +++V+K     N  +   + + + YQ+ RGL YIHT   V HRD+KP+N+L +
Sbjct:   25 YRIEEVIGKGSYGVVCSAYDTHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFRDIYVVFELMESDLHQVIK----ANDDLTPEHYQFFLYQLLRGLKYIHTA-NVFHRDLKPKNILAN 160          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MPK15_ORYSJ (Mitogen-activated protein kinase 15 OS=Oryza sativa subsp. japonica GN=MPK15 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.873e-17
Identity = 49/141 (34.75%), Postives = 81/141 (57.45%), Query Frame = 3
Query:  339 YMAERVVGTGSFGIVFQAKCLETGETVAIKKV------LQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            Y  E V+G GS+G+V  A    TGE VAIKK+      + D     RE++L+RL+ HP+++ +KH     + ++   + +V E +   +++V+K     N  +   + + + YQ+ RGL YIHT   V HRD+KP+N+L +
Sbjct:   13 YKIEEVIGKGSYGVVCSALDTHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIK----ANDDLTPEHYQFFLYQLLRGLKYIHTA-NVFHRDLKPKNILAN 148          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MRK1_ENCCU (Probable serine/threonine-protein kinase MRK1 homolog OS=Encephalitozoon cuniculi GN=MRK1 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.194e-17
Identity = 49/143 (34.27%), Postives = 80/143 (55.94%), Query Frame = 3
Query:  315 GEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            GE K+ + Y    ++G GSFG+V +    +     A+K+V QDRRY NREL ++  +DHPN++ L   F +  +    +LN++ ++V       L+ Y   N+ +    ++    QI  GL Y+H    +CHRD+KP N+L+D
Sbjct:   49 GEVKE-VRYRYVEMIGRGSFGVVVKIMD-DRHNFFALKRVYQDRRYHNRELGILMEVDHPNIVRLVSYFHTDKTSSGAYLNIITDFVGMN----LEEYIKANRGVETEEIRSVYRQILEGLRYLHE-KNICHRDMKPSNILID 184          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MPK10_ORYSJ (Mitogen-activated protein kinase 10 OS=Oryza sativa subsp. japonica GN=MPK10 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 3.194e-17
Identity = 48/141 (34.04%), Postives = 81/141 (57.45%), Query Frame = 3
Query:  339 YMAERVVGTGSFGIVFQAKCLETGETVAIKKV------LQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            Y  + V+G GS+G+V  A  + TGE VAIKK+      + D     RE++L+RL+ HP+++ +KH     + +D   + +V E +   +++V+K     N  +   + + + YQ+ R L YIHT   V HRD+KP+N+L +
Sbjct:   25 YKIQEVIGKGSYGVVCSAIDVHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIK----ANDDLTKEHYQFFLYQLLRALKYIHTA-NVYHRDLKPKNILAN 160          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MPK14_ORYSJ (Mitogen-activated protein kinase 14 OS=Oryza sativa subsp. japonica GN=MPK14 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.172e-17
Identity = 48/141 (34.04%), Postives = 81/141 (57.45%), Query Frame = 3
Query:  339 YMAERVVGTGSFGIVFQAKCLETGETVAIKKV------LQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            Y  E V+G GS+G+V  A    TG+ VAIKK+      + D     RE++L+RL+ HP+++ +KH     + ++   + +V E +   +++V+K     N  +   + + + YQ+ RGL YIHT   V HRD+KP+N+L +
Sbjct:   13 YKIEEVIGKGSYGVVCSALDTHTGDKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIK----ANDDLTPEHYQFFLYQLLRGLKYIHTA-NVFHRDLKPKNILAN 148          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MPK8_ARATH (Mitogen-activated protein kinase 8 OS=Arabidopsis thaliana GN=MPK8 PE=2 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.214e-16
Identity = 48/141 (34.04%), Postives = 80/141 (56.74%), Query Frame = 3
Query:  339 YMAERVVGTGSFGIVFQAKCLETGETVAIKKV------LQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            Y  + VVG GS+G+V  A    TGE VAIKK+      + D     RE++L+RL+ HP+V+ +KH     + ++   + +V E +   +++V+K     N  +   + + + YQ+ RGL Y+H    V HRD+KP+N+L +
Sbjct:  104 YQIQEVVGKGSYGVVASAVDSHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDVVEIKHIMLPPSRREFRDIYVVFELMESDLHQVIK----ANDDLTPEHYQFFLYQLLRGLKYVHAA-NVFHRDLKPKNILAN 239          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MPK11_ORYSJ (Mitogen-activated protein kinase 11 OS=Oryza sativa subsp. japonica GN=MPK11 PE=2 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.214e-16
Identity = 48/141 (34.04%), Postives = 79/141 (56.03%), Query Frame = 3
Query:  339 YMAERVVGTGSFGIVFQAKCLETGETVAIKKV------LQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            Y    V+G GS+G+V  A  + TGE VAIKK+      + D     RE++L+RL+ HP+++ +KH     +  D   + +V E +   +++V+K     N  +   + + + YQ+ R L YIHT   V HRD+KP+N+L +
Sbjct:   26 YEVLEVIGKGSYGLVCSANDIHTGEKVAIKKIHNIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSKMDFRDIYVVFELMESDLHQVIK----ANDDLTREHYQFFLYQMLRALKYIHTA-NVYHRDLKPKNILAN 161          
The following BLAST results are available for this feature:
BLAST of FC873743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 247
Match NameE-valueIdentityDescription
GSK31_SCHPO1.247e-3754.73Protein kinase gsk31 OS=Schizosaccharomyces pombe ... [more]
MCK1_YEAST2.882e-2643.88Protein kinase MCK1 OS=Saccharomyces cerevisiae GN... [more]
KOM8_YEAST4.928e-1836.96Probable serine/threonine-protein kinase YOL128C O... [more]
MPK16_ARATH1.873e-1734.75Mitogen-activated protein kinase 16 OS=Arabidopsis... [more]
MPK15_ORYSJ1.873e-1734.75Mitogen-activated protein kinase 15 OS=Oryza sativ... [more]
MRK1_ENCCU3.194e-1734.27Probable serine/threonine-protein kinase MRK1 homo... [more]
MPK10_ORYSJ3.194e-1734.04Mitogen-activated protein kinase 10 OS=Oryza sativ... [more]
MPK14_ORYSJ4.172e-1734.04Mitogen-activated protein kinase 14 OS=Oryza sativ... [more]
MPK8_ARATH1.214e-1634.04Mitogen-activated protein kinase 8 OS=Arabidopsis ... [more]
MPK11_ORYSJ1.214e-1634.04Mitogen-activated protein kinase 11 OS=Oryza sativ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2AA12FM1 AbsDev Citrus clementina cDNA clone KN0AAI2AA12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873743 ID=FC873743; Name=FC873743; organism=Citrus clementina; type=EST; length=771bp
AAAGCAAAGCGAATAAGAAAGAAAAGAGGGGAGAGAGAGGGAGAGAGAGA
GTGAGTGTATGTGTATTGAATTGAGAGTTTGAAGCTGTAGCAGCTGTAAC
CCACATGGCTTCAATGCCCTTGGGGCCTCAGCCTCAGCCACCGCCGCCAC
CACAAGCACAAGCCCCACCATCGCAGCAACCGCACTTCGACAATGACCTG
CTGAAACGACACCGTCCGGATATGGACTCCGACAAGGAAATGTCAGCTGC
AGTTATTCAGGGGAATGATGCTGTCACTGGCCACATCATTTCTACCACAA
TTGGAGGCAAAAATGGCGAACCCAAGCAGACGATCAGTTACATGGCAGAG
CGTGTTGTTGGTACTGGATCATTCGGTATCGTTTTTCAGGCAAAATGCTT
GGAAACTGGAGAGACAGTGGCTATAAAAAAGGTCTTGCAAGACAGGCGGT
ATAAAAATCGTGAACTGCAGTTAATGCGTTTGATGGATCACCCGAATGTG
ATTTCCCTTAAGCATTGTTTCTTCTCCACAACAAGTAAAGATGAGCTTTT
TTTGAATTTGGTTATGGAATATGTTCCTGAGACTATGTACCGGGTGCTGA
AGCATTACAGCAGTATGAACCAGAGGATGCCCCTCATCTATGTAAAACTG
TATACATATCAAATCTTTAGGGGCTTGGCATATATTCATACAGTTCCTGG
GGTCTGCCATAGGGATGTGAAGCCTCAAAACCTCTTGGTTGATCCACTCA
CCCACCGGTTAAGCTTTGTGA
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