FC873743

Overview
NameFC873743
Unique NameFC873743
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length771
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC873743_ssr41 microsatellite FC873743_ssr41:41..50. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig5940 contig Ccv1_Contig5940:15..785. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MPK17_ARATH (Mitogen-activated protein kinase 17 OS=Arabidopsis thaliana GN=MPK17 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.071e-16
Identity = 51/149 (34.23%), Postives = 84/149 (56.38%), Query Frame = 3
Query:  315 GEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKV------LQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            GE  Q   Y  + VVG GS+G+V  A+C  TG  VAIKK+      + D     RE++L+RL+ HP+++ +KH       K+   + +V E +   ++ VLK    +N  +   + + + YQ+ RGL ++H+   V HRD+KP+N+L +
Sbjct:   11 GEASQ---YQIQEVVGKGSYGVVASAECPHTGGKVAIKKMTNVFEHVSDAIRILREIKLLRLLRHPDIVEIKHIMLPPCRKEFKDIYVVFELMESDLHHVLK----VNDDLTPQHHQFFLYQLLRGLKFMHSA-HVFHRDLKPKNILAN 151          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MPK9_ORYSJ (Mitogen-activated protein kinase 9 OS=Oryza sativa subsp. japonica GN=MPK9 PE=3 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 2.704e-16
Identity = 48/141 (34.04%), Postives = 80/141 (56.74%), Query Frame = 3
Query:  339 YMAERVVGTGSFGIVFQAKCLETGETVAIKKV------LQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            Y  + V+G GS+G+V  A  L T + VAIKKV      + D     RE++L+RL+ HP+++ +KH     + +D   + +V E +   +++V+K     N  +   + + + YQ+ R L YIHT   V HRD+KP+N+L +
Sbjct:  107 YRIQEVIGKGSYGVVCSAIDLHTRQKVAIKKVHNIFEHVSDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIK----ANDDLTKEHYQFFLYQLLRALKYIHTA-SVYHRDLKPKNILAN 242          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MPK8_ORYSJ (Mitogen-activated protein kinase 8 OS=Oryza sativa subsp. japonica GN=MPK8 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 2.704e-16
Identity = 48/141 (34.04%), Postives = 80/141 (56.74%), Query Frame = 3
Query:  339 YMAERVVGTGSFGIVFQAKCLETGETVAIKKV------LQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            Y  + V+G GS+G+V  A    TG+ VAIKK+      L D     RE++L+RL+ HP+++ +KH     + +D   + +V E +   +++V+K     N  +   + + + YQ+ R L YIHT   V HRD+KP+N+L +
Sbjct:   13 YKIQEVIGKGSYGVVCSAIDQHTGDKVAIKKIHNIFEHLSDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKDIYVVFELMDTDLHQVIK----ANDDLTKEHHQFFLYQMLRALKYIHTA-NVYHRDLKPKNILAN 148          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MPK7_ORYSJ (Mitogen-activated protein kinase 7 OS=Oryza sativa subsp. japonica GN=MPK7 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.704e-16
Identity = 48/141 (34.04%), Postives = 80/141 (56.74%), Query Frame = 3
Query:  339 YMAERVVGTGSFGIVFQAKCLETGETVAIKKV------LQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            Y  + +VG GS+G+V  A    TG+ VAIKK+      L D     RE++L+RL+ HP+++ +KH     + +D   + +V E +   +++V+K     N  +   + + + YQ+ R L YIHT   V HRD+KP+N+L +
Sbjct:   13 YKIQEIVGKGSYGVVCSAIDQHTGDKVAIKKIHNIFEHLSDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKDIYVVFELMDTDLHQVIK----ANDDLTKEHHQFFLYQMLRALKYIHTA-NVYHRDLKPKNILAN 148          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MPK9_ARATH (Mitogen-activated protein kinase 9 OS=Arabidopsis thaliana GN=MPK9 PE=2 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 3.532e-16
Identity = 46/141 (32.62%), Postives = 81/141 (57.45%), Query Frame = 3
Query:  339 YMAERVVGTGSFGIVFQAKCLETGETVAIKKV------LQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            Y  + V+G GS+G+V  A    +GE VAIKK+      + D     RE++L+RL+ HP+++ +KH     + ++   + +V E +   +++V+K     N  +   + + + YQ+ RGL +IHT   V HRD+KP+N+L +
Sbjct:   23 YQIQEVIGKGSYGVVASAIDTHSGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHVMLPPSRREFRDIYVVFELMESDLHQVIK----ANDDLTPEHYQFFLYQLLRGLKFIHTA-NVFHRDLKPKNILAN 158          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MPK15_ARATH (Mitogen-activated protein kinase 15 OS=Arabidopsis thaliana GN=MPK15 PE=2 SV=3)

HSP 1 Score: 85.1149 bits (209), Expect = 4.613e-16
Identity = 48/141 (34.04%), Postives = 80/141 (56.74%), Query Frame = 3
Query:  339 YMAERVVGTGSFGIVFQAKCLETGETVAIKKV------LQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            Y  + VVG GS+G+V  A    TGE VAIKK+      + D     RE++L+RL+ HP+V+ +KH     + ++   + +V E +   +++V+K     N  +   + + + YQ+ RGL Y+H    V HRD+KP+N+L +
Sbjct:   90 YQIQEVVGKGSYGVVGSAIDTHTGERVAIKKINDVFDHISDATRILREIKLLRLLLHPDVVEIKHIMLPPSRREFRDVYVVFELMESDLHQVIK----ANDDLTPEHHQFFLYQLLRGLKYVHAA-NVFHRDLKPKNILAN 225          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MPK17_ORYSJ (Mitogen-activated protein kinase 17 OS=Oryza sativa subsp. japonica GN=MPK17 PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 6.024e-16
Identity = 45/141 (31.91%), Postives = 80/141 (56.74%), Query Frame = 3
Query:  339 YMAERVVGTGSFGIVFQAKCLETGETVAIKKV------LQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            Y    V+G GS+G+V  A   +TGE VAIKK+      + D     RE++L+RL+ HP+++ +KH     + ++   + ++ E +   +++V+K     N  +   + + + YQ+ RG+ YIH    V HRD+KP+N+L +
Sbjct:  105 YKVSEVIGKGSYGVVAAAVDTQTGERVAIKKINDVFDHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFRDIYVIFELMESDLHQVIK----ANDDLTPEHHQFFLYQLLRGMKYIHAA-SVFHRDLKPKNILAN 240          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: CDK2_CARAU (Cell division protein kinase 2 OS=Carassius auratus GN=cdk2 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.024e-16
Identity = 51/142 (35.92%), Postives = 84/142 (59.15%), Query Frame = 3
Query:  336 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            S+     +G G++G+V++AK   TGETVA+KK+  D   +       RE+ L++ ++HPN++ L H    T +K    L LV E++ + + R +   +     +PL  VK Y +Q+ +GLA+ H+   V HRD+KPQNLL++
Sbjct:    3 SFQKVEKIGEGTYGVVYKAKNKVTGETVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL-HDVIHTENK----LYLVFEFLHQDLKRFMDSSTVTGISLPL--VKSYLFQLLQGLAFCHS-HRVLHRDLKPQNLLIN 136          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MPK20_ARATH (Mitogen-activated protein kinase 20 OS=Arabidopsis thaliana GN=MPK20 PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 7.868e-16
Identity = 46/141 (32.62%), Postives = 80/141 (56.74%), Query Frame = 3
Query:  339 YMAERVVGTGSFGIVFQAKCLETGETVAIKKV------LQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            +  + V+G GS+G+V  A    TGE VAIKK+      + D     RE++L+RL+ HP+++ +KH     + ++   + +V E +   +++V+K     N  +   + + + YQ+ R L YIHT   V HRD+KP+N+L +
Sbjct:   25 FKVQEVIGKGSYGVVCSAIDTLTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELMESDLHQVIK----ANDDLTREHYQFFLYQLLRALKYIHTA-NVYHRDLKPKNILAN 160          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MPK12_ORYSJ (Mitogen-activated protein kinase 12 OS=Oryza sativa subsp. japonica GN=MPK12 PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.342e-15
Identity = 48/149 (32.21%), Postives = 82/149 (55.03%), Query Frame = 3
Query:  315 GEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKV------LQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            GE  Q   Y  + V+G GS+G+V  A    TGE VAIKK+      + D     RE++L+RL+ HP+++ +KH     + ++   + +V E +   +++V++     N  +   + + + YQ+ R L YIH    V HRD+KP+N+L +
Sbjct:   82 GEASQ---YQIQEVIGKGSYGVVAAAVDTRTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFQDIYVVFELMESDLHQVIR----ANDDLTPEHYQFFLYQLLRALKYIHAA-NVFHRDLKPKNILAN 222          
The following BLAST results are available for this feature:
BLAST of FC873743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 247
Match NameE-valueIdentityDescription
MPK17_ARATH2.071e-1634.23Mitogen-activated protein kinase 17 OS=Arabidopsis... [more]
MPK9_ORYSJ2.704e-1634.04Mitogen-activated protein kinase 9 OS=Oryza sativa... [more]
MPK8_ORYSJ2.704e-1634.04Mitogen-activated protein kinase 8 OS=Oryza sativa... [more]
MPK7_ORYSJ2.704e-1634.04Mitogen-activated protein kinase 7 OS=Oryza sativa... [more]
MPK9_ARATH3.532e-1632.62Mitogen-activated protein kinase 9 OS=Arabidopsis ... [more]
MPK15_ARATH4.613e-1634.04Mitogen-activated protein kinase 15 OS=Arabidopsis... [more]
MPK17_ORYSJ6.024e-1631.91Mitogen-activated protein kinase 17 OS=Oryza sativ... [more]
CDK2_CARAU6.024e-1635.92Cell division protein kinase 2 OS=Carassius auratu... [more]
MPK20_ARATH7.868e-1632.62Mitogen-activated protein kinase 20 OS=Arabidopsis... [more]
MPK12_ORYSJ1.342e-1532.21Mitogen-activated protein kinase 12 OS=Oryza sativ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2AA12FM1 AbsDev Citrus clementina cDNA clone KN0AAI2AA12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873743 ID=FC873743; Name=FC873743; organism=Citrus clementina; type=EST; length=771bp
AAAGCAAAGCGAATAAGAAAGAAAAGAGGGGAGAGAGAGGGAGAGAGAGA
GTGAGTGTATGTGTATTGAATTGAGAGTTTGAAGCTGTAGCAGCTGTAAC
CCACATGGCTTCAATGCCCTTGGGGCCTCAGCCTCAGCCACCGCCGCCAC
CACAAGCACAAGCCCCACCATCGCAGCAACCGCACTTCGACAATGACCTG
CTGAAACGACACCGTCCGGATATGGACTCCGACAAGGAAATGTCAGCTGC
AGTTATTCAGGGGAATGATGCTGTCACTGGCCACATCATTTCTACCACAA
TTGGAGGCAAAAATGGCGAACCCAAGCAGACGATCAGTTACATGGCAGAG
CGTGTTGTTGGTACTGGATCATTCGGTATCGTTTTTCAGGCAAAATGCTT
GGAAACTGGAGAGACAGTGGCTATAAAAAAGGTCTTGCAAGACAGGCGGT
ATAAAAATCGTGAACTGCAGTTAATGCGTTTGATGGATCACCCGAATGTG
ATTTCCCTTAAGCATTGTTTCTTCTCCACAACAAGTAAAGATGAGCTTTT
TTTGAATTTGGTTATGGAATATGTTCCTGAGACTATGTACCGGGTGCTGA
AGCATTACAGCAGTATGAACCAGAGGATGCCCCTCATCTATGTAAAACTG
TATACATATCAAATCTTTAGGGGCTTGGCATATATTCATACAGTTCCTGG
GGTCTGCCATAGGGATGTGAAGCCTCAAAACCTCTTGGTTGATCCACTCA
CCCACCGGTTAAGCTTTGTGA
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