FC873743

Overview
NameFC873743
Unique NameFC873743
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length771
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC873743_ssr41 microsatellite FC873743_ssr41:41..50. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig5940 contig Ccv1_Contig5940:15..785. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MPK13_ORYSI (Mitogen-activated protein kinase 13 OS=Oryza sativa subsp. indica GN=MPK13 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.531e-14
Identity = 48/149 (32.21%), Postives = 82/149 (55.03%), Query Frame = 3
Query:  315 GEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKV------LQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            GE  Q   Y  + VVG GS+G+V  A    TGE VAIKK+      + D     RE++++RL+ HP+++ +KH     T ++   + +V E +   +++V++     N  +   + + + YQ+   L YIH+   V HRD+KP+N+L +
Sbjct:    8 GEASQ---YQIQEVVGKGSYGVVAAAVDTHTGERVAIKKINDVFEHVSDAIRILREIKVLRLLRHPDIVVIKHIMLPPTRREFRDIYVVFELMESDLHQVIE----ANHDLSPEHHRFFLYQLLCALKYIHSA-NVFHRDLKPKNILAN 148          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: HOG1_BLUGR (Mitogen-activated protein kinase HOG1 OS=Blumeria graminis GN=HOG1 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.531e-14
Identity = 55/146 (37.67%), Postives = 78/146 (53.42%), Query Frame = 3
Query:  330 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKK--------VLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            T  Y   + VG G+FG+V  AK   TG+ VA+KK        VL  R Y  REL+L++ + H NVISL   F S        +  V E +   ++R+L       Q     +++ + YQI RGL Y+H+  GV HRD+KP N+LV+
Sbjct:   17 TSRYSDLQPVGMGAFGLVCSAKDNLTGQNVAVKKIMKPFSTPVLSKRTY--RELKLLKHLRHENVISLSDIFISPLED----IYFVTELLGTDLHRLLTSRPLEKQ-----FIQYFLYQILRGLKYVHSA-GVVHRDLKPSNILVN 150          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: HOG1_BOTFB (Mitogen-activated protein kinase hog1 OS=Botryotinia fuckeliana (strain B05.10) GN=hog1 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.306e-14
Identity = 55/146 (37.67%), Postives = 77/146 (52.74%), Query Frame = 3
Query:  330 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKK--------VLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            T  Y   + VG G+FG+V  AK   TG  VA+KK        VL  R Y  REL+L++ + H NVISL   F S        +  V E +   ++R+L       Q     +++ + YQI RGL Y+H+  GV HRD+KP N+LV+
Sbjct:   17 TSRYSDLQPVGMGAFGLVCSAKDNLTGSNVAVKKIMKPFSTPVLSKRTY--RELKLLKHLKHENVISLSDIFISPLED----IYFVTELLGTDLHRLLTSRPLEKQ-----FIQYFLYQILRGLKYVHSA-GVVHRDLKPSNILVN 150          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MPK19_ARATH (Mitogen-activated protein kinase 19 OS=Arabidopsis thaliana GN=MPK19 PE=2 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 4.317e-14
Identity = 45/141 (31.91%), Postives = 79/141 (56.03%), Query Frame = 3
Query:  339 YMAERVVGTGSFGIVFQAKCLETGETVAIKKV------LQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            Y    V+G GS+G+V  A   +TGE VAIKK+      + D     RE++L+RL+ HP+++ +K      + ++   + +V E +   +++V+K     N  +   + + + YQ+ R L Y+HT   V HRD+KP+N+L +
Sbjct:   25 YRILEVIGKGSYGVVCAAIDTQTGEKVAIKKINDVFEHVSDALRILREVKLLRLLRHPDIVEIKSIMLPPSKREFKDIYVVFELMESDLHQVIK----ANDDLTREHHQFFLYQMLRALKYMHTA-NVYHRDLKPKNILAN 160          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: HOG1_CRYNV (Mitogen-activated protein kinase HOG1 OS=Cryptococcus neoformans var. grubii GN=HOG1 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.317e-14
Identity = 54/146 (36.99%), Postives = 79/146 (54.11%), Query Frame = 3
Query:  330 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKK--------VLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            T  Y+  + VG G+FG+V  AK   +G +VAIKK        VL  R Y  REL+L++ + H N+ISL   F S        +  V E +   ++R+L       Q     +++ + YQI RGL Y+H+  GV HRD+KP N+LV+
Sbjct:   17 TTRYVDLQPVGMGAFGLVCSAKDQLSGTSVAIKKIMKPFSTPVLSKRTY--RELKLLKHLRHENIISLSDIFISPLED----IYFVTELLGTDLHRLLTSRPLEKQ-----FIQYFLYQILRGLKYVHSA-GVVHRDLKPSNILVN 150          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: HOG1_CRYNE (Mitogen-activated protein kinase HOG1 OS=Cryptococcus neoformans GN=HOG1 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.317e-14
Identity = 54/146 (36.99%), Postives = 79/146 (54.11%), Query Frame = 3
Query:  330 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKK--------VLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            T  Y+  + VG G+FG+V  AK   +G +VAIKK        VL  R Y  REL+L++ + H N+ISL   F S        +  V E +   ++R+L       Q     +++ + YQI RGL Y+H+  GV HRD+KP N+LV+
Sbjct:   17 TTRYVDLQPVGMGAFGLVCSAKDQLSGTSVAIKKIMKPFSTPVLSKRTY--RELKLLKHLRHENIISLSDIFISPLED----IYFVTELLGTDLHRLLTSRPLEKQ-----FIQYFLYQILRGLKYVHSA-GVVHRDLKPSNILVN 150          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: HOG1_ASPTN (Mitogen-activated protein kinase hog1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=hog1 PE=3 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 4.317e-14
Identity = 53/146 (36.30%), Postives = 78/146 (53.42%), Query Frame = 3
Query:  330 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKK--------VLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            T  Y   + VG G+FG+V  AK   TG+ VA+KK        VL  R Y  REL+L++ + H N+ISL   F S        +  V E +   ++R+L       Q     +++ + YQI RGL Y+H+  GV HRD+KP N+L++
Sbjct:   17 TSRYTDLQPVGMGAFGLVCSAKDQLTGQPVAVKKIMKPFSTPVLSKRTY--RELKLLKHLRHENIISLSDIFISPLED----IYFVTELLGTDLHRLLTSRPLEKQ-----FIQYFLYQILRGLKYVHSA-GVVHRDLKPSNILIN 150          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: CDK2_RAT (Cell division protein kinase 2 OS=Rattus norvegicus GN=Cdk2 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.317e-14
Identity = 46/135 (34.07%), Postives = 80/135 (59.26%), Query Frame = 3
Query:  357 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            +G G++G+V++AK   TGE VA+KK+  D   +       RE+ L++ ++HPN++ L     +     E  L LV E++ + + + +   +S    +PL  +K Y +Q+ +GLA+ H+   V HRD+KPQNLL++
Sbjct:   10 IGEGTYGVVYKAKNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT-----ENKLYLVFEFLHQDLKKFMD--ASALTGLPLPLIKSYLFQLLQGLAFCHS-HRVLHRDLKPQNLLIN 136          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: HOG1_COCMI (Mitogen-activated protein kinase HOG1 OS=Cochliobolus miyabeanus GN=HOG1 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.639e-14
Identity = 53/146 (36.30%), Postives = 78/146 (53.42%), Query Frame = 3
Query:  330 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKK--------VLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            T  Y   ++VG G+FG+V  AK   T + VA+KK        VL  R Y  REL+L++ + H N+ISL   F S        +  V E +   ++R+L       Q     +++ + YQI RGL Y+H+  GV HRD+KP N+LV+
Sbjct:   17 TSRYTDLQLVGMGAFGLVCSAKDQLTNQAVAVKKIMKPFSTPVLSKRTY--RELKLLKHLRHENIISLSDIFISPLED----IYFVTELLGTDLHRLLTSRPLEKQ-----FIQYFLYQILRGLKYVHSA-GVVHRDLKPSNILVN 150          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: CDK2_MOUSE (Cell division protein kinase 2 OS=Mus musculus GN=Cdk2 PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 5.639e-14
Identity = 46/135 (34.07%), Postives = 80/135 (59.26%), Query Frame = 3
Query:  357 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            +G G++G+V++AK   TGE VA+KK+  D   +       RE+ L++ ++HPN++ L     +     E  L LV E++ + + + +   +S    +PL  +K Y +Q+ +GLA+ H+   V HRD+KPQNLL++
Sbjct:   10 IGEGTYGVVYKAKNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT-----ENKLYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHS-HRVLHRDLKPQNLLIN 136          
The following BLAST results are available for this feature:
BLAST of FC873743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 247
Match NameE-valueIdentityDescription
MPK13_ORYSI2.531e-1432.21Mitogen-activated protein kinase 13 OS=Oryza sativ... [more]
HOG1_BLUGR2.531e-1437.67Mitogen-activated protein kinase HOG1 OS=Blumeria ... [more]
HOG1_BOTFB3.306e-1437.67Mitogen-activated protein kinase hog1 OS=Botryotin... [more]
MPK19_ARATH4.317e-1431.91Mitogen-activated protein kinase 19 OS=Arabidopsis... [more]
HOG1_CRYNV4.317e-1436.99Mitogen-activated protein kinase HOG1 OS=Cryptococ... [more]
HOG1_CRYNE4.317e-1436.99Mitogen-activated protein kinase HOG1 OS=Cryptococ... [more]
HOG1_ASPTN4.317e-1436.30Mitogen-activated protein kinase hog1 OS=Aspergill... [more]
CDK2_RAT4.317e-1434.07Cell division protein kinase 2 OS=Rattus norvegicu... [more]
HOG1_COCMI5.639e-1436.30Mitogen-activated protein kinase HOG1 OS=Cochliobo... [more]
CDK2_MOUSE5.639e-1434.07Cell division protein kinase 2 OS=Mus musculus GN=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2AA12FM1 AbsDev Citrus clementina cDNA clone KN0AAI2AA12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873743 ID=FC873743; Name=FC873743; organism=Citrus clementina; type=EST; length=771bp
AAAGCAAAGCGAATAAGAAAGAAAAGAGGGGAGAGAGAGGGAGAGAGAGA
GTGAGTGTATGTGTATTGAATTGAGAGTTTGAAGCTGTAGCAGCTGTAAC
CCACATGGCTTCAATGCCCTTGGGGCCTCAGCCTCAGCCACCGCCGCCAC
CACAAGCACAAGCCCCACCATCGCAGCAACCGCACTTCGACAATGACCTG
CTGAAACGACACCGTCCGGATATGGACTCCGACAAGGAAATGTCAGCTGC
AGTTATTCAGGGGAATGATGCTGTCACTGGCCACATCATTTCTACCACAA
TTGGAGGCAAAAATGGCGAACCCAAGCAGACGATCAGTTACATGGCAGAG
CGTGTTGTTGGTACTGGATCATTCGGTATCGTTTTTCAGGCAAAATGCTT
GGAAACTGGAGAGACAGTGGCTATAAAAAAGGTCTTGCAAGACAGGCGGT
ATAAAAATCGTGAACTGCAGTTAATGCGTTTGATGGATCACCCGAATGTG
ATTTCCCTTAAGCATTGTTTCTTCTCCACAACAAGTAAAGATGAGCTTTT
TTTGAATTTGGTTATGGAATATGTTCCTGAGACTATGTACCGGGTGCTGA
AGCATTACAGCAGTATGAACCAGAGGATGCCCCTCATCTATGTAAAACTG
TATACATATCAAATCTTTAGGGGCTTGGCATATATTCATACAGTTCCTGG
GGTCTGCCATAGGGATGTGAAGCCTCAAAACCTCTTGGTTGATCCACTCA
CCCACCGGTTAAGCTTTGTGA
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