FC873743

Overview
NameFC873743
Unique NameFC873743
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length771
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: CDK2_CRIGR (Cell division protein kinase 2 OS=Cricetulus griseus GN=CDK2 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.639e-14
Identity = 46/135 (34.07%), Postives = 80/135 (59.26%), Query Frame = 3
Query:  357 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            +G G++G+V++AK   TGE VA+KK+  D   +       RE+ L++ ++HPN++ L     +     E  L LV E++ + + + +   +S    +PL  +K Y +Q+ +GLA+ H+   V HRD+KPQNLL++
Sbjct:   10 IGEGTYGVVYKAKNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT-----ENKLYLVFEFLHQDLKKFMD--ASAVTGIPLPLIKSYLFQLLQGLAFCHS-HRVLHRDLKPQNLLIN 136          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: CDK2_BOVIN (Cell division protein kinase 2 OS=Bos taurus GN=CDK2 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.639e-14
Identity = 46/135 (34.07%), Postives = 80/135 (59.26%), Query Frame = 3
Query:  357 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            +G G++G+V++AK   TGE VA+KK+  D   +       RE+ L++ ++HPN++ L     +     E  L LV E++ + + + +   +S    +PL  +K Y +Q+ +GLA+ H+   V HRD+KPQNLL++
Sbjct:   10 IGEGTYGVVYKAKNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT-----ENKLYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHS-HRVLHRDLKPQNLLIN 136          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MAK_RAT (Serine/threonine-protein kinase MAK OS=Rattus norvegicus GN=Mak PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.364e-14
Identity = 48/138 (34.78%), Postives = 76/138 (55.07%), Query Frame = 3
Query:  339 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQ-----DRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLL 737
            Y   R +G G++G V   K  E+GE VAIK++ +     D     RE++ ++ ++H NVI LK        ++   L  + EY+ E +Y+++K     N+  P   ++   YQI +GLA+IH   G  HRD+KP+NLL
Sbjct:    4 YTTMRQLGDGTYGSVLMGKSNESGELVAIKRMKRKFYSWDECMNLREVKSLKKLNHANVIKLKEVI-----RENDHLYFIFEYMKENLYQLMK---DRNKLFPESVIRNIMYQILQGLAFIHK-HGFFHRDMKPENLL 132          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MAK_HUMAN (Serine/threonine-protein kinase MAK OS=Homo sapiens GN=MAK PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 7.364e-14
Identity = 48/138 (34.78%), Postives = 76/138 (55.07%), Query Frame = 3
Query:  339 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQ-----DRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLL 737
            Y   R +G G++G V   K  E+GE VAIK++ +     D     RE++ ++ ++H NVI LK        ++   L  + EY+ E +Y+++K     N+  P   ++   YQI +GLA+IH   G  HRD+KP+NLL
Sbjct:    4 YTTMRQLGDGTYGSVLMGKSNESGELVAIKRMKRKFYSWDECMNLREVKSLKKLNHANVIKLKEVI-----RENDHLYFIFEYMKENLYQLMK---DRNKLFPESVIRNIMYQILQGLAFIHK-HGFFHRDMKPENLL 132          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: HOG1_CHAGB (Mitogen-activated protein kinase HOG1 OS=Chaetomium globosum GN=HOG1 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.364e-14
Identity = 55/146 (37.67%), Postives = 77/146 (52.74%), Query Frame = 3
Query:  330 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKK--------VLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            T  Y   + VG G+FG+V  AK   T + VAIKK        VL  R Y  REL+L++ + H NVISL   F S        +  V E +   ++R+L       Q     +++ + YQI RGL Y+H+  GV HRD+KP N+LV+
Sbjct:   17 TSRYSDLQPVGMGAFGLVCSAKDQLTSQNVAIKKIMKPFSTPVLAKRTY--RELKLLKHLKHENVISLSDIFISPLED----IYFVTELLGTDLHRLLTSRPLEKQ-----FIQYFLYQIMRGLKYVHSA-GVVHRDLKPSNILVN 150          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MPK5_ARATH (Mitogen-activated protein kinase 5 OS=Arabidopsis thaliana GN=MPK5 PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 9.618e-14
Identity = 45/137 (32.85%), Postives = 78/137 (56.93%), Query Frame = 3
Query:  351 RVVGTGSFGIVFQAKCLETGETVAIKKVLQ------DRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            R +G G++G V  A   ET E +AIKK+ +      D +   RE++L+R ++H NV+ +K        +D + + +V E +   ++++++   S+N      + + + YQI RGL YIH+   V HRD+KP NLL++
Sbjct:   47 RPIGRGAYGFVCAAVDSETHEEIAIKKIGKAFDNKVDAKRTLREIKLLRHLEHENVVVIKDIIRPPKKEDFVDVYIVFELMDTDLHQIIRSNQSLNDD----HCQYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLN 178          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: HOG1_PHANO (Mitogen-activated protein kinase HOG1 OS=Phaeosphaeria nodorum GN=HOG1 PE=3 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 9.618e-14
Identity = 54/146 (36.99%), Postives = 77/146 (52.74%), Query Frame = 3
Query:  330 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKK--------VLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            T  Y   + VG G+FG+V  AK   T + VAIKK        VL  R Y  REL+L++ + H N+ISL   F S        +  V E +   ++R+L       Q     +++ + YQI RGL Y+H+  GV HRD+KP N+LV+
Sbjct:   17 TSRYTDLQPVGMGAFGLVCSAKDQLTSQAVAIKKIMKPFSTPVLSKRTY--RELKLLKHLRHENIISLSDIFISPLED----IYFVTELLGTDLHRLLTSRPLEKQ-----FIQYFLYQILRGLKYVHSA-GVVHRDLKPSNILVN 150          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: HOG1_NEUCR (Mitogen-activated protein kinase hog-1 OS=Neurospora crassa GN=hog-1 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.618e-14
Identity = 55/146 (37.67%), Postives = 77/146 (52.74%), Query Frame = 3
Query:  330 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKK--------VLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            T  Y   + VG G+FG+V  AK   T + VAIKK        VL  R Y  REL+L++ + H NVISL   F S        +  V E +   ++R+L       Q     +++ + YQI RGL Y+H+  GV HRD+KP N+LV+
Sbjct:   17 TSRYSDLQPVGMGAFGLVCSAKDQLTNQNVAIKKIMKPFSTPVLAKRTY--RELKLLKHLRHENVISLSDIFISPLED----IYFVTELLGTDLHRLLTSRPLEKQ-----FIQYFLYQIMRGLKYVHSA-GVVHRDLKPSNILVN 150          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: HOG1_NEOFI (Mitogen-activated protein kinase hog1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=hog1 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.618e-14
Identity = 52/146 (35.62%), Postives = 78/146 (53.42%), Query Frame = 3
Query:  330 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKK--------VLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            T  Y   + VG G+FG+V  A+   TG+ VA+KK        VL  R Y  REL+L++ + H N+ISL   F S        +  V E +   ++R+L       Q     +++ + YQI RGL Y+H+  GV HRD+KP N+L++
Sbjct:   17 TSRYTDLQPVGMGAFGLVCSARDQLTGQPVAVKKIMKPFSTPVLSKRTY--RELKLLKHLRHENIISLSDIFISPLED----IYFVTELLGTDLHRLLTSRPLEKQ-----FIQYFLYQILRGLKYVHSA-GVVHRDLKPSNILIN 150          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: HOG1_ASPNC (Mitogen-activated protein kinase hog1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=hog1 PE=3 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 9.618e-14
Identity = 52/146 (35.62%), Postives = 78/146 (53.42%), Query Frame = 3
Query:  330 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKK--------VLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            T  Y   + VG G+FG+V  A+   TG+ VA+KK        VL  R Y  REL+L++ + H N+ISL   F S        +  V E +   ++R+L       Q     +++ + YQI RGL Y+H+  GV HRD+KP N+L++
Sbjct:   17 TSRYTDLQPVGMGAFGLVCSARDQLTGQPVAVKKIMKPFSTPVLSKRTY--RELKLLKHLRHENIISLSDIFISPLED----IYFVTELLGTDLHRLLTSRPLEKQ-----FIQYFLYQILRGLKYVHSA-GVVHRDLKPSNILIN 150          
The following BLAST results are available for this feature:
BLAST of FC873743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 247
Match NameE-valueIdentityDescription
CDK2_CRIGR5.639e-1434.07Cell division protein kinase 2 OS=Cricetulus grise... [more]
CDK2_BOVIN5.639e-1434.07Cell division protein kinase 2 OS=Bos taurus GN=CD... [more]
MAK_RAT7.364e-1434.78Serine/threonine-protein kinase MAK OS=Rattus norv... [more]
MAK_HUMAN7.364e-1434.78Serine/threonine-protein kinase MAK OS=Homo sapien... [more]
HOG1_CHAGB7.364e-1437.67Mitogen-activated protein kinase HOG1 OS=Chaetomiu... [more]
MPK5_ARATH9.618e-1432.85Mitogen-activated protein kinase 5 OS=Arabidopsis ... [more]
HOG1_PHANO9.618e-1436.99Mitogen-activated protein kinase HOG1 OS=Phaeospha... [more]
HOG1_NEUCR9.618e-1437.67Mitogen-activated protein kinase hog-1 OS=Neurospo... [more]
HOG1_NEOFI9.618e-1435.62Mitogen-activated protein kinase hog1 OS=Neosartor... [more]
HOG1_ASPNC9.618e-1435.62Mitogen-activated protein kinase hog1 OS=Aspergill... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2AA12FM1 AbsDev Citrus clementina cDNA clone KN0AAI2AA12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873743 ID=FC873743; Name=FC873743; organism=Citrus clementina; type=EST; length=771bp
AAAGCAAAGCGAATAAGAAAGAAAAGAGGGGAGAGAGAGGGAGAGAGAGA
GTGAGTGTATGTGTATTGAATTGAGAGTTTGAAGCTGTAGCAGCTGTAAC
CCACATGGCTTCAATGCCCTTGGGGCCTCAGCCTCAGCCACCGCCGCCAC
CACAAGCACAAGCCCCACCATCGCAGCAACCGCACTTCGACAATGACCTG
CTGAAACGACACCGTCCGGATATGGACTCCGACAAGGAAATGTCAGCTGC
AGTTATTCAGGGGAATGATGCTGTCACTGGCCACATCATTTCTACCACAA
TTGGAGGCAAAAATGGCGAACCCAAGCAGACGATCAGTTACATGGCAGAG
CGTGTTGTTGGTACTGGATCATTCGGTATCGTTTTTCAGGCAAAATGCTT
GGAAACTGGAGAGACAGTGGCTATAAAAAAGGTCTTGCAAGACAGGCGGT
ATAAAAATCGTGAACTGCAGTTAATGCGTTTGATGGATCACCCGAATGTG
ATTTCCCTTAAGCATTGTTTCTTCTCCACAACAAGTAAAGATGAGCTTTT
TTTGAATTTGGTTATGGAATATGTTCCTGAGACTATGTACCGGGTGCTGA
AGCATTACAGCAGTATGAACCAGAGGATGCCCCTCATCTATGTAAAACTG
TATACATATCAAATCTTTAGGGGCTTGGCATATATTCATACAGTTCCTGG
GGTCTGCCATAGGGATGTGAAGCCTCAAAACCTCTTGGTTGATCCACTCA
CCCACCGGTTAAGCTTTGTGA
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