FC873743

Overview
NameFC873743
Unique NameFC873743
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length771
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC873743_ssr41 microsatellite FC873743_ssr41:41..50. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig5940 contig Ccv1_Contig5940:15..785. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MPK18_ARATH (Mitogen-activated protein kinase 18 OS=Arabidopsis thaliana GN=MPK18 PE=1 SV=3)

HSP 1 Score: 76.6406 bits (187), Expect = 1.641e-13
Identity = 44/141 (31.21%), Postives = 78/141 (55.32%), Query Frame = 3
Query:  339 YMAERVVGTGSFGIVFQAKCLETGETVAIKKV------LQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            Y    V+G GS+G+V  A    TGE VAIKK+      + D     RE++L+RL+ HP+++ +K      + ++   + +V E +   +++V+K     N  +   + + + YQ+ R L ++HT   V HRD+KP+N+L +
Sbjct:   13 YRILEVIGKGSYGVVCAAIDTHTGEKVAIKKINDVFEHISDALRILREVKLLRLLRHPDIVEIKSIMLPPSKREFKDIYVVFELMESDLHQVIK----ANDDLTREHHQFFLYQMLRALKFMHTA-NVYHRDLKPKNILAN 148          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: HOG1_MAGGR (Mitogen-activated protein kinase HOG1 OS=Magnaporthe grisea GN=HOG1 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.641e-13
Identity = 54/146 (36.99%), Postives = 77/146 (52.74%), Query Frame = 3
Query:  330 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKK--------VLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            T  Y   + VG G+FG+V  A+   T + VAIKK        VL  R Y  REL+L++ + H NVISL   F S        +  V E +   ++R+L       Q     +++ + YQI RGL Y+H+  GV HRD+KP N+LV+
Sbjct:   17 TSRYSDLQPVGMGAFGLVCSARDQLTNQNVAIKKIMKPFSTPVLAKRTY--RELKLLKHLKHENVISLSDIFISPLED----IYFVTELLGTDLHRLLTSRPLEKQ-----FIQYFLYQIMRGLKYVHSA-GVVHRDLKPSNILVN 150          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: HOG1_CANAL (Mitogen-activated protein kinase HOG1 OS=Candida albicans GN=HOG1 PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.641e-13
Identity = 52/144 (36.11%), Postives = 79/144 (54.86%), Query Frame = 3
Query:  330 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD------RRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            T  Y     VG G+FG+V  A    TG+ VA+KKV++        +   REL+L++ + H N+I+L   F S   +D  F+N   E     ++R+L       Q     +++ +TYQI RGL YIH+  GV HRD+KP N+L++
Sbjct:   20 TNRYTELNPVGMGAFGLVCSAVDRLTGQNVAVKKVMKPFSTSVLAKRTYRELKLLKHLKHENLITLDDIFISPL-EDIYFVN---ELQGTDLHRLLNSRPLEKQ-----FIQYFTYQIMRGLKYIHSA-GVIHRDLKPSNILIN 153          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: CKB21_ARATH (Cyclin-dependent kinase B2-1 OS=Arabidopsis thaliana GN=CDKB2-1 PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.641e-13
Identity = 45/142 (31.69%), Postives = 79/142 (55.63%), Query Frame = 3
Query:  357 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDH-PNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHRL 761
            VG G++G V++A+   TG+ VA+KK       +       RE+ ++R++   P+V+ L       + + +  L LV EY+   + + ++ + S  + +P   +K   YQ+ +G+A+ H   G+ HRD+KP NLL+DP T RL
Sbjct:   20 VGEGTYGKVYRAREKATGKIVALKKTRLHEDEEGVPSTTLREISILRMLARDPHVVRLMDVKQGLSKEGKTVLYLVFEYMDTDVKKFIRSFRSTGKNIPTQTIKSLMYQLCKGMAFCHG-HGILHRDLKPHNLLMDPKTMRL 160          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MMK1_MEDSA (Mitogen-activated protein kinase homolog MMK1 OS=Medicago sativa GN=MMK1 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.143e-13
Identity = 49/135 (36.30%), Postives = 75/135 (55.56%), Query Frame = 3
Query:  357 VGTGSFGIVFQAKCLETGETVAIKKVLQ------DRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            +G G++GIV  A   ET E VA+KK+        D +   RE++L+R MDH NV++++        + E+F ++ + Y  E M   L      NQ +   + + + YQI RGL YIH+   V HRD+KP NLL++
Sbjct:   61 IGKGAYGIVCSAHNSETNEHVAVKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRD--IVPPPQREVFNDVYIAY--ELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLN 190          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: HOG1_YARLI (Mitogen-activated protein kinase HOG1 OS=Yarrowia lipolytica GN=HOG1 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.143e-13
Identity = 53/146 (36.30%), Postives = 78/146 (53.42%), Query Frame = 3
Query:  330 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKK--------VLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            T  Y+    VG G+FG+V  AK   T + VAIKK        VL  R Y  REL+L++ + H N+I L   F S        +  V E +   ++R+L     M + +   +++ + YQI RGL Y+H+  GV HRD+KP N+LV+
Sbjct:   17 TSRYVDLNPVGMGAFGLVCSAKDQLTDQNVAIKKIMKPFGTPVLSKRTY--RELKLLKHLRHENLICLSDIFISPLED----IYFVTELLGTDLHRLL-----MTRPLEKQFIQYFLYQILRGLKYVHSA-GVVHRDLKPSNILVN 150          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: HOG1_GIBZE (Mitogen-activated protein kinase HOG1 OS=Gibberella zeae GN=HOG1 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.143e-13
Identity = 53/146 (36.30%), Postives = 77/146 (52.74%), Query Frame = 3
Query:  330 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKK--------VLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            T  Y   + VG G+FG+V  A+   T + VA+KK        VL  R Y  REL+L++ + H NVISL   F S        +  V E +   ++R+L       Q     +++ + YQI RGL Y+H+  GV HRD+KP N+LV+
Sbjct:   17 TSRYSDLQPVGMGAFGLVCSARDQLTNQNVAVKKIMKPFSTPVLAKRTY--RELKLLKHLKHENVISLSDIFISPLED----IYFVTELLGTDLHRLLTSRPLEKQ-----FIQYFLYQIMRGLKYVHSA-GVVHRDLKPSNILVN 150          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: MAPK_PEA (Mitogen-activated protein kinase homolog D5 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.798e-13
Identity = 49/135 (36.30%), Postives = 75/135 (55.56%), Query Frame = 3
Query:  357 VGTGSFGIVFQAKCLETGETVAIKKVLQ------DRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            +G G++GIV  A   ET E VA+KK+        D +   RE++L+R MDH NV++++        + E+F ++ + Y  E M   L      NQ +   + + + YQI RGL YIH+   V HRD+KP NLL++
Sbjct:   68 IGKGAYGIVCSAHNSETNEHVAVKKIANAFDNKIDAKRTLREIKLVRHMDHENVVAIRD--IVPPPQREVFNDVYIAY--ELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLN 197          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: ICK_HUMAN (Serine/threonine-protein kinase ICK OS=Homo sapiens GN=ICK PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.798e-13
Identity = 45/138 (32.61%), Postives = 77/138 (55.80%), Query Frame = 3
Query:  339 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQ-----DRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLL 737
            Y   R +G G++G V   + +E+GE +AIKK+ +     +     RE++ ++ ++H NV+ LK        ++   L  + EY+ E +Y+++K     N+  P   ++   YQI +GLA+IH   G  HRD+KP+NLL
Sbjct:    4 YTTIRQLGDGTYGSVLLGRSIESGELIAIKKMKRKFYSWEECMNLREVKSLKKLNHANVVKLKEVI-----RENDHLYFIFEYMKENLYQLIK---ERNKLFPESAIRNIMYQILQGLAFIHK-HGFFHRDLKPENLL 132          
BLAST of FC873743 vs. ExPASy Swiss-Prot
Match: HOG1_TRIHA (Mitogen-activated protein kinase hog1 OS=Trichoderma harzianum GN=hog1 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.798e-13
Identity = 53/146 (36.30%), Postives = 77/146 (52.74%), Query Frame = 3
Query:  330 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKK--------VLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 743
            T  Y   + VG G+FG+V  A+   T + VA+KK        VL  R Y  REL+L++ + H NVISL   F S        +  V E +   ++R+L       Q     +++ + YQI RGL Y+H+  GV HRD+KP N+LV+
Sbjct:   17 TSRYSDLQPVGMGAFGLVCSARDQLTNQNVAVKKIMKPFSTPVLAKRTY--RELKLLKHLRHENVISLSDIFISPLED----IYFVTELLGTDLHRLLTSRPLEKQ-----FIQYFLYQIMRGLKYVHSA-GVVHRDLKPSNILVN 150          
The following BLAST results are available for this feature:
BLAST of FC873743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 247
Match NameE-valueIdentityDescription
MPK18_ARATH1.641e-1331.21Mitogen-activated protein kinase 18 OS=Arabidopsis... [more]
HOG1_MAGGR1.641e-1336.99Mitogen-activated protein kinase HOG1 OS=Magnaport... [more]
HOG1_CANAL1.641e-1336.11Mitogen-activated protein kinase HOG1 OS=Candida a... [more]
CKB21_ARATH1.641e-1331.69Cyclin-dependent kinase B2-1 OS=Arabidopsis thalia... [more]
MMK1_MEDSA2.143e-1336.30Mitogen-activated protein kinase homolog MMK1 OS=M... [more]
HOG1_YARLI2.143e-1336.30Mitogen-activated protein kinase HOG1 OS=Yarrowia ... [more]
HOG1_GIBZE2.143e-1336.30Mitogen-activated protein kinase HOG1 OS=Gibberell... [more]
MAPK_PEA2.798e-1336.30Mitogen-activated protein kinase homolog D5 OS=Pis... [more]
ICK_HUMAN2.798e-1332.61Serine/threonine-protein kinase ICK OS=Homo sapien... [more]
HOG1_TRIHA2.798e-1336.30Mitogen-activated protein kinase hog1 OS=Trichoder... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2AA12FM1 AbsDev Citrus clementina cDNA clone KN0AAI2AA12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873743 ID=FC873743; Name=FC873743; organism=Citrus clementina; type=EST; length=771bp
AAAGCAAAGCGAATAAGAAAGAAAAGAGGGGAGAGAGAGGGAGAGAGAGA
GTGAGTGTATGTGTATTGAATTGAGAGTTTGAAGCTGTAGCAGCTGTAAC
CCACATGGCTTCAATGCCCTTGGGGCCTCAGCCTCAGCCACCGCCGCCAC
CACAAGCACAAGCCCCACCATCGCAGCAACCGCACTTCGACAATGACCTG
CTGAAACGACACCGTCCGGATATGGACTCCGACAAGGAAATGTCAGCTGC
AGTTATTCAGGGGAATGATGCTGTCACTGGCCACATCATTTCTACCACAA
TTGGAGGCAAAAATGGCGAACCCAAGCAGACGATCAGTTACATGGCAGAG
CGTGTTGTTGGTACTGGATCATTCGGTATCGTTTTTCAGGCAAAATGCTT
GGAAACTGGAGAGACAGTGGCTATAAAAAAGGTCTTGCAAGACAGGCGGT
ATAAAAATCGTGAACTGCAGTTAATGCGTTTGATGGATCACCCGAATGTG
ATTTCCCTTAAGCATTGTTTCTTCTCCACAACAAGTAAAGATGAGCTTTT
TTTGAATTTGGTTATGGAATATGTTCCTGAGACTATGTACCGGGTGCTGA
AGCATTACAGCAGTATGAACCAGAGGATGCCCCTCATCTATGTAAAACTG
TATACATATCAAATCTTTAGGGGCTTGGCATATATTCATACAGTTCCTGG
GGTCTGCCATAGGGATGTGAAGCCTCAAAACCTCTTGGTTGATCCACTCA
CCCACCGGTTAAGCTTTGTGA
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