FC873744
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RAB18_CHICK (Ras-related protein Rab-18 OS=Gallus gallus GN=RAB18 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.478e-33 Identity = 73/163 (44.79%), Postives = 102/163 (62.58%), Query Frame = 1 Query: 238 VKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGS-PDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 723 +K++++G+SGVGKS ++LRF FDP T+G F +TI++ D K IWDTAGQER+ L P YYRG YD+T D+F K W+ EL+ + + DIV LVGNK D E REV +G+++A K+ M FIE SAKT D + FEE+ +++ Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISV-DGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVKMLVGNKID-KENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKI 169
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RB11A_TOBAC (Ras-related protein Rab11A OS=Nicotiana tabacum GN=RAB11A PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 4.543e-33 Identity = 73/157 (46.50%), Postives = 100/157 (63.69%), Query Frame = 1 Query: 241 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEI 711 K+VL+GDSGVGKS I+ RF R +F SK T+G F ++T+ ++ T VK +IWDTAGQERY A+ YYRG YDIT +F+ Q W++EL+ H +IV+ L GNK+DL R V QD +K G+ F+ETSA A N+++ F+ I Sbjct: 14 KMVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT-VKAQIWDTAGQERYRAITSAYYRGAVGALLFYDITKRQTFDNVQRWLRELRDHRDSNIVIILAGNKSDLKHLRAVSEQDDQALVKKEGLSFLETSALEALNVDKAFQTI 169
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RAB2B_MOUSE (Ras-related protein Rab-2B OS=Mus musculus GN=Rab2b PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 4.543e-33 Identity = 63/163 (38.65%), Postives = 107/163 (65.64%), Query Frame = 1 Query: 241 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 729 K +++GD+GVGKSC++L+F +F P +T+G F ++ + + D +K +IWDTAGQE + ++ YYRG YDIT ++FN W+++ ++H S ++V+ L+GNK+DL +R+V ++G +A ++G+ F+ETSAKTA N+ + + AK + R Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNI-DGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAYINTAKEIYR 169
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RAB18_RAT (Ras-related protein Rab-18 OS=Rattus norvegicus GN=Rab18 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 4.543e-33 Identity = 73/163 (44.79%), Postives = 102/163 (62.58%), Query Frame = 1 Query: 238 VKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGS-PDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 723 +K++++G+SGVGKS ++LRF FDP T+G F +TI++ D K IWDTAGQER+ L P YYRG YD+T D+F K W+ EL+ + + DIV LVGNK D E REV +G+++A K+ M FIE SAKT D + FEE+ +++ Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISV-DGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKID-KENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKI 169
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RAB18_PONAB (Ras-related protein Rab-18 OS=Pongo abelii GN=RAB18 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 4.543e-33 Identity = 73/163 (44.79%), Postives = 102/163 (62.58%), Query Frame = 1 Query: 238 VKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGS-PDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 723 +K++++G+SGVGKS ++LRF FDP T+G F +TI++ D K IWDTAGQER+ L P YYRG YD+T D+F K W+ EL+ + + DIV LVGNK D E REV +G+++A K+ M FIE SAKT D + FEE+ +++ Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISV-DGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKID-KENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKI 169
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RAB18_MOUSE (Ras-related protein Rab-18 OS=Mus musculus GN=Rab18 PE=2 SV=2) HSP 1 Score: 141.739 bits (356), Expect = 4.543e-33 Identity = 73/163 (44.79%), Postives = 102/163 (62.58%), Query Frame = 1 Query: 238 VKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGS-PDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 723 +K++++G+SGVGKS ++LRF FDP T+G F +TI++ D K IWDTAGQER+ L P YYRG YD+T D+F K W+ EL+ + + DIV LVGNK D E REV +G+++A K+ M FIE SAKT D + FEE+ +++ Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISV-DGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKID-KENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKI 169
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RAB18_HUMAN (Ras-related protein Rab-18 OS=Homo sapiens GN=RAB18 PE=1 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 4.543e-33 Identity = 73/163 (44.79%), Postives = 102/163 (62.58%), Query Frame = 1 Query: 238 VKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGS-PDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 723 +K++++G+SGVGKS ++LRF FDP T+G F +TI++ D K IWDTAGQER+ L P YYRG YD+T D+F K W+ EL+ + + DIV LVGNK D E REV +G+++A K+ M FIE SAKT D + FEE+ +++ Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISV-DGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKID-KENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKI 169
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RAB18_BOVIN (Ras-related protein Rab-18 OS=Bos taurus GN=RAB18 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 4.543e-33 Identity = 73/163 (44.79%), Postives = 102/163 (62.58%), Query Frame = 1 Query: 238 VKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGS-PDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 723 +K++++G+SGVGKS ++LRF FDP T+G F +TI++ D K IWDTAGQER+ L P YYRG YD+T D+F K W+ EL+ + + DIV LVGNK D E REV +G+++A K+ M FIE SAKT D + FEE+ +++ Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISV-DGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKID-KENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKI 169
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RAB1A_LYMST (Ras-related protein Rab-1A OS=Lymnaea stagnalis GN=RAB1A PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 5.933e-33 Identity = 70/161 (43.48%), Postives = 101/161 (62.73%), Query Frame = 1 Query: 241 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 723 KL+L+GDSGVGKSC++LRF + + T+G F +TI L D T+K +IWDTAGQER+ + YYRG YD+T +SFN + W++E+ ++ S ++ LVGNK+DL K+ V EYA++ G+ F+ETSAK A N+ Q F +A + Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDFTTAKEYADQLGIPFLETSAKNATNVEQAFMTMAAEI 172
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: YPT1_NEUCR (GTP-binding protein ypt1 OS=Neurospora crassa GN=ypt-1 PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 7.749e-33 Identity = 71/168 (42.26%), Postives = 104/168 (61.90%), Query Frame = 1 Query: 241 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPRPSPSS 744 KL+L+GDSGVGKSC++LRF + + T+G F +TI L D TVK +IWDTAGQER+ + YYRG YD+T DSFN + W++E+ ++ + + LVGNK+D+ +K+ V E+A+ G+ F+ETSAK A N+ Q F +A+++ SS Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DGKTVKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMTDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGSS 176 The following BLAST results are available for this feature:
BLAST of FC873744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873744 ID=FC873744; Name=FC873744; organism=Citrus clementina; type=EST; length=814bpback to top |