FC873744
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: DJC27_DANRE (DnaJ homolog subfamily C member 27 OS=Danio rerio GN=dnajc27 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.420e-18 Identity = 52/165 (31.52%), Postives = 91/165 (55.15%), Query Frame = 1 Query: 226 KNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKEL-QKHGSP----DIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFE 705 K+LRVK++ LG++ VGKSCI+ R+ +F P T+G + + ++D +K I+D AG + + +Y+ YD+ +SF+ W+ E+ Q+ GS +I+ + NK DL ++R V +G +AE G + ETSA++ + IN++F+ Sbjct: 13 KSLRVKVISLGNAEVGKSCIIKRYCEKRFVPKYLATIGIDYGVTKVQVRDRE-IKVNIFDMAGHPFFYEVRNEFYKDSQGVILVYDVGLRESFDALDSWLTEMKQEMGSQANMENIIFVVCANKVDLTKRRVVDESEGRLWAESRGFHYFETSAQSGEGINEMFQ 176
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RALA_HUMAN (Ras-related protein Ral-A OS=Homo sapiens GN=RALA PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.161e-18 Identity = 52/162 (32.10%), Postives = 92/162 (56.79%), Query Frame = 1 Query: 241 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNK-AQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 723 K++++G GVGKS + L+F+ +F + T S+ + + D V+ +I DTAGQE YAA+ Y+R + IT +SF A + + L+ ++ LVGNK+DL +KR+V ++ AE+ + ++ETSAKT N++++F ++ + + Sbjct: 16 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVL--DGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKEDENVPFLLVGNKSDLEDKRQVSVEEAKNRAEQWNVNYVETSAKTRANVDKVFFDLMREI 175
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RAB23_HUMAN (Ras-related protein Rab-23 OS=Homo sapiens GN=RAB23 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.161e-18 Identity = 51/161 (31.68%), Postives = 86/161 (53.42%), Query Frame = 1 Query: 238 VKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKR 720 +K+V++G+ VGKS ++ R+ +G F K T+G FL + I + D V+ +WDTAGQE + A+ YYRG + T +SF W +++ DI LV NK DL + + ++ A++ + F TS K N+N++F+ +A++ Sbjct: 10 IKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDED-VRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAVSSWREKVVAEVG-DIPTVLVQNKIDLLDDSCIKNEEAEALAKRLKLRFYRTSVKEDLNVNEVFKYLAEK 168
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RAC10_ARATH (Rac-like GTP-binding protein ARAC10 OS=Arabidopsis thaliana GN=ARAC10 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.128e-18 Identity = 58/177 (32.77%), Postives = 89/177 (50.28%), Query Frame = 1 Query: 238 VKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSF-NKAQYWVKELQKHGSPDIVMALVGNKADLHEKRE----------VPAQDGIEYAEKNG-MFFIETSAKTADNINQLFEEIAKRLPRP 732 +K V +GD VGK+C+++ + +F TV +F + + + TTV +WDTAGQE Y L PL YRG + + S S+ N + W+ ELQ H +P + + LVG K DL E + V G E + G ++IE S+KT N+ +F+ K + +P Sbjct: 9 IKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVV--EGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLSFSLVSRASYENVFKKWIPELQ-HFAPGVPLVLVGTKLDLREDKHYLADHPGLSPVTTAQGEELRKLIGATYYIECSSKTQQNVKAVFDSAIKEVIKP 182
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RAB6A_RAT (Ras-related protein Rab-6A (Fragment) OS=Rattus norvegicus GN=Rab6a PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.128e-18 Identity = 44/107 (41.12%), Postives = 65/107 (60.75%), Query Frame = 1 Query: 406 TAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLP 726 TAGQER+ +L P Y R YDIT+ +SF + W+ +++ D+++ LVGNK DL +KR+V ++G A++ + FIETSAK N+ QLF +A LP Sbjct: 1 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALP 107
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: DJC27_BOVIN (DnaJ homolog subfamily C member 27 OS=Bos taurus GN=DNAJC27 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.128e-18 Identity = 51/165 (30.91%), Postives = 90/165 (54.55%), Query Frame = 1 Query: 226 KNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQK----HGSPD-IVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFE 705 K+LR+K++ +G++ VGKSCI+ R+ +F T+G + + ++D +K I+D AG + + +Y+ YD+ DSF+ W+ E+++ HG+ + IV A+ NK D + R V +G +AE G + ETSA+T + IN++F+ Sbjct: 13 KSLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVQVRDRE-IKVNIFDMAGDPFFYEVRNEFYKDTQGVILVYDVGQKDSFDALDTWLAEMKQDLGPHGNMENIVFAVCANKIDCTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQ 176
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RASV_DICDI (Ras-like protein rasV OS=Dictyostelium discoideum GN=rasV PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.391e-18 Identity = 55/170 (32.35%), Postives = 94/170 (55.29%), Query Frame = 1 Query: 202 ENAGSSDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKH-GSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEE 708 EN +++ KN V+L ++GD GVGK+ + +F+ F T+ S+ Q I + D + + +I DTAGQ+ A+ + R Y IT SFN+ + +++ + D+ + ++GNK+DL +R+V +G E A++ GM F+E SAK NI+++F E Sbjct: 22 ENNCNNNNKNNIVQLCIMGDGGVGKTAVTTQFISNHFVYYYDPTIEDSYRKQ-ICVSDKSYI-LDILDTAGQDELTAMRDQWIRSCEGFVLVYSITCKSSFNQVLNFREQIIRVLDRDDVPIMMIGNKSDLVNERQVTYHEGKELAQRLGMSFMEVSAKNRSNIDEVFHE 189
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RHO1_DROME (Ras-like GTP-binding protein Rho1 OS=Drosophila melanogaster GN=Rho1 PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 7.041e-18 Identity = 58/172 (33.72%), Postives = 88/172 (51.16%), Query Frame = 1 Query: 232 LRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSF-NKAQYWVKELQKHGSPDIVMALVGNKADLH------------EKREVPAQDGIEYAEK-NGMFFIETSAKTADNINQLFE 705 +R KLV++GD GK+C+++ F + QF TV ++++ D V+ +WDTAGQE Y L PL Y + + SPDS N + W E+ KH P++ + LVGNK DL ++ V Q+G AEK N ++E SAK+ + + +FE Sbjct: 4 IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEV--DGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEV-KHFCPNVPIILVGNKKDLRNDPNTIRDLAKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVRDVFE 172
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RAS_LACBI (Ras-like protein OS=Laccaria bicolor PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 7.041e-18 Identity = 53/164 (32.32%), Postives = 85/164 (51.83%), Query Frame = 1 Query: 241 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIV-MALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 729 KLV++G G GKSC+ ++ ++ F T+ S+ Q + D ++ DTAGQE Y+A+ Y R Y ITS SF + + +++ + D + +VGNK DL ++R V Q+G A + G FIETSAK+ N+ F ++ + + R Sbjct: 10 KLVVVGGGGEGKSCLTIQLIQSHFVDEYDPTIEESYRKQCVI--DDEVALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSITSRQSFEEIMTFQQQILRVKDKDYFPIIVVGNKCDLDKERVVSKQEGESLARQFGCKFIETSAKSRINVENAFYDLVREIRR 171
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RAS1_NEUCR (Protein ras-1 OS=Neurospora crassa GN=ras-1 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 7.041e-18 Identity = 54/162 (33.33%), Postives = 86/162 (53.09%), Query Frame = 1 Query: 241 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPD-IVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 723 KLV++G GVGKSC+ ++ ++G F T+ S+ Q D+ +I DTAGQE Y+A+ Y R + I S +SF + + + +++ + D M +VGNK DL +R V Q+G A + G +IETSAKT N+ F ++ + + Sbjct: 10 KLVVVGGGGVGKSCLTIQLIQGHFLDEYDPTIEDSYRKQCTI--DNEVALLDILDTAGQEEYSAMREQYMRTGEGFLLVFAINSRESFEEIRIYQQQILRVKDRDSFPMIIVGNKYDLRGERVVSEQEGQALAAEFGTKYIETSAKTQHNVENAFYDLVREI 169 The following BLAST results are available for this feature:
BLAST of FC873744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873744 ID=FC873744; Name=FC873744; organism=Citrus clementina; type=EST; length=814bpback to top |