FC873744
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RABM_DICDI (Ras-related protein RabM OS=Dictyostelium discoideum GN=rabM PE=3 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 4.564e-17 Identity = 51/168 (30.36%), Postives = 87/168 (51.79%), Query Frame = 1 Query: 238 VKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKN--------GMFFIETSAKTADNINQLFEEIAK 717 +K++ LGDS VGK+ + FV G+++ ++ TV SF S+T+ +++ + +WDT QER+ L+P+YYR +DI + SF W+ E +K + L+G K D+ + +++ IE KN + + ETSAK + NI + + K Sbjct: 6 LKIITLGDSYVGKTSVFNNFVTGKYE-INECTVSPSFYSKTLTIENEPVI-LNVWDTCSQERFNGLSPIYYRWSNCYTLCFDIHNEKSFKNLDKWMDEARKFCIGKVPFVLIGTKKDIPRTDKSISKERIEQWCKNIEDQGIIDRVHYFETSAKFSQNITESYNAALK 171
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: DJC27_PONAB (DnaJ homolog subfamily C member 27 OS=Pongo abelii GN=DNAJC27 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.564e-17 Identity = 47/165 (28.48%), Postives = 87/165 (52.73%), Query Frame = 1 Query: 226 KNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSP-----DIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFE 705 ++LR+K++ +G++ VGKSCI+ R+ +F T+G + + ++D +K I+D AG + + +Y+ YD+ DSF+ W+ E+++ P +I+ + NK D + R V +G +AE G + ETSA+T + IN++F+ Sbjct: 13 RSLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHVRDRE-IKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGPHGNMENIIFVVCANKIDCTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQ 176
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: DJC27_HUMAN (DnaJ homolog subfamily C member 27 OS=Homo sapiens GN=DNAJC27 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.564e-17 Identity = 47/165 (28.48%), Postives = 87/165 (52.73%), Query Frame = 1 Query: 226 KNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSP-----DIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFE 705 ++LR+K++ +G++ VGKSCI+ R+ +F T+G + + ++D +K I+D AG + + +Y+ YD+ DSF+ W+ E+++ P +I+ + NK D + R V +G +AE G + ETSA+T + IN++F+ Sbjct: 13 RSLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHVRDRE-IKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGPHGNMENIIFVVCANKIDCTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQ 176
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RASL_COPCI (24 kDa Ras-like protein OS=Coprinopsis cinerea GN=CC-RAS PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.961e-17 Identity = 52/162 (32.10%), Postives = 84/162 (51.85%), Query Frame = 1 Query: 241 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPD-IVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 723 KLV++G GVGKS + ++F++ F T+ S+ Q I D ++ DTAGQE Y A+ Y R Y ITS +SF + + +++ + D + +V NK DL +R+V +G + A+ G FIETSAK N+++ F + + + Sbjct: 12 KLVVVGGGGVGKSALTIQFIQSHFVDEYDPTIEDSYRKQCII--DDEVALLDVLDTAGQEEYGAMREQYMRTGEGFLLVYSITSRNSFEEISIFHQQILRVKDQDSFPVIVVANKCDLEYERQVGMNEGRDLAKHFGCKFIETSAKQRINVDEAFSNLVREI 171
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RASD_DICDI (Ras-like protein rasD OS=Dictyostelium discoideum GN=rasD PE=2 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 5.961e-17 Identity = 53/162 (32.72%), Postives = 90/162 (55.56%), Query Frame = 1 Query: 241 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIV-MALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 723 KLV++G GVGKS + ++ ++ F T+ S+ Q +++ D T + +I DTAGQE Y+A+ Y R Y ITS S+++ + +++ + D V + LVGNKADL +R+V +G E A+ F+E+SAK+ N+ + F + + + Sbjct: 5 KLVIVGGGGVGKSALTIQLIQNHFIDEYDPTIEDSYRKQ-VSIDDETCL-LDILDTAGQEEYSAMRDQYMRTGQGFLCVYSITSRSSYDEIASFREQILRVKDKDRVPLILVGNKADLDHERQVSVNEGQELAKGFNCPFMESSAKSRINVEEAFYSLVREI 164
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RASC_DICDI (Ras-like protein rasC OS=Dictyostelium discoideum GN=rasC PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.961e-17 Identity = 56/166 (33.73%), Postives = 86/166 (51.81%), Query Frame = 1 Query: 238 VKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKE-LQKHGSPDIVMALVGNKADLHEK-REVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 729 +KLV++GD GVGKS + ++ + QF T+ S+ Q D +I DTAGQE Y+A+ Y R Y I S SF + ++ L+ + ++GNKADL +K R+VP +G E A+ G F+ETSAK+ N+ + F + + + R Sbjct: 5 LKLVIVGDGGVGKSALTIQLTQNQFIAEYDPTIENSYRKQVNI--DEEVYMLDILDTAGQEEYSAMRDQYIRSGRGFLIVYSIISRASFEAVTTFREQILRVKDLSTYPIVIIGNKADLPDKDRKVPPMEGKELAKSFGAPFLETSAKSRVNVEEAFFTLVREIKR 168
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RAS2_RHIRA (Ras-like protein 2 OS=Rhizomucor racemosus GN=RAS2 PE=2 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 5.961e-17 Identity = 54/164 (32.93%), Postives = 83/164 (50.61%), Query Frame = 1 Query: 241 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPD-IVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 729 K+V++GD GVGKS + ++F++ F T+ S+ Q L DS +I DTAGQE Y+A+ + R Y ITS +F + Q +++ + + M LVGNK DL + R+VP G + A++ F E SAK I F + + + R Sbjct: 13 KIVMVGDGGVGKSAMTIQFIQSTFVDEYDPTIEDSYRKQ--CLIDSECAMLDILDTAGQEEYSAMRERFMRNGEGFVLIYSITSYHTFEQVQKLHEQIARVKDLEHFPMVLVGNKCDLEQDRQVPTSAGRDLAKQYNCQFFEASAKQNVRIQDAFHGLVREIRR 174
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RAC4_ARATH (Rac-like GTP-binding protein ARAC4 OS=Arabidopsis thaliana GN=ARAC4 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.961e-17 Identity = 56/177 (31.64%), Postives = 88/177 (49.72%), Query Frame = 1 Query: 238 VKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSF-NKAQYWVKELQKHGSPDIVMALVGNKADLHEKRE----------VPAQDGIEYAEKNG-MFFIETSAKTADNINQLFEEIAKRLPRP 732 +K V +GD VGK+C+++ + F TV +F + + D TV +WDTAGQE Y L PL YRG + + S S+ N A+ W+ EL +H +P + + LVG K DL + ++ + G E + G +IE S+KT N+ +F+ K + +P Sbjct: 6 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVV--DGNTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENIAKKWIPEL-RHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPITTNQGEELKKLIGSAVYIECSSKTQQNVKAVFDAAIKVVLQP 179
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RAC11_ARATH (Rac-like GTP-binding protein ARAC11 OS=Arabidopsis thaliana GN=ARAC11 PE=1 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 5.961e-17 Identity = 55/177 (31.07%), Postives = 91/177 (51.41%), Query Frame = 1 Query: 238 VKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSF-NKAQYWVKELQKHGSPDIVMALVGNKADLHEKRE----------VPAQDGIEYAEKNGM-FFIETSAKTADNINQLFEEIAKRLPRP 732 VK V +GD VGK+C+++ + F TV +F + + + +TV +WDTAGQE Y L PL YRG + + S S+ N ++ W+ EL KH +P + + LVG K DL + ++ + G E ++ G +IE S+KT +N+ +F+ + + +P Sbjct: 7 VKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVV--NGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPEL-KHYAPGVPIVLVGTKLDLRDDKQFFIDHPGAVPITTAQGEELRKQIGAPTYIECSSKTQENVKAVFDAAIRVVLQP 180
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RAB34_MOUSE (Ras-related protein Rab-34 OS=Mus musculus GN=Rab34 PE=1 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 5.961e-17 Identity = 45/161 (27.95%), Postives = 84/161 (52.17%), Query Frame = 1 Query: 241 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSP-DIVMALVGNKADLHEKRE--VPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIA 714 K++++GD VGK+C++ RF + FD K T+G F + + ++WDTAGQER+ +A YYRG +++ S + W+ + K P ++++ LVG+K DL + + +D ++ A++ + S+ T +N+ + F +A Sbjct: 54 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVL-GVPFSLQLWDTAGQERFKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLTDALKENDPSNVLLFLVGSKKDLSTPAQYSLMEKDALKVAQEIKAEYWAVSSLTGENVREFFFRVA 213 The following BLAST results are available for this feature:
BLAST of FC873744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873744 ID=FC873744; Name=FC873744; organism=Citrus clementina; type=EST; length=814bpback to top |