FC873744
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RB11C_LOTJA (Ras-related protein Rab11C OS=Lotus japonicus GN=RAB11C PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.409e-34 Identity = 74/157 (47.13%), Postives = 101/157 (64.33%), Query Frame = 1 Query: 241 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEI 711 K+VL+GDSGVGKS I+ RF R +F SK T+G F ++T+ ++ T VK +IWDTAGQERY A+ YYRG YDIT +F+ Q W++EL+ H +IV+ + GNK+DL+ R V DG +EK G+ F+ETSA A NI + F+ I Sbjct: 14 KIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT-VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLNHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQTI 169
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RAB6A_CAEEL (Ras-related protein Rab-6.1 OS=Caenorhabditis elegans GN=rab-6.1 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.409e-34 Identity = 72/164 (43.90%), Postives = 105/164 (64.02%), Query Frame = 1 Query: 235 RVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLP 726 + KLV LG+ VGK+ I+ RF+ FD T + T+G FLS+T+ L+D T ++ ++WDTAGQER+ +L P Y R YDIT+ +SF++ WV +++ D+++ LVGNK DL +KR+V +DG + A + FIETSAK N+ QLF +IA LP Sbjct: 11 KFKLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRT-IRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNANSFHQTTKWVDDVRNERGCDVIIVLVGNKTDLADKRQVSTEDGEKKARDLNVMFIETSAKAGYNVKQLFRKIATALP 173
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RAB2A_RABIT (Ras-related protein Rab-2A OS=Oryctolagus cuniculus GN=RAB2A PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.409e-34 Identity = 65/161 (40.37%), Postives = 106/161 (65.84%), Query Frame = 1 Query: 241 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 723 K +++GD+GVGKSC++L+F +F P +T+G F ++ I + D +K +IWDTAGQE + ++ YYRG YDIT D+FN W+++ ++H + ++V+ L+GNK+DL +REV ++G +A ++G+ F+ETSAKTA N+ + F AK + Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEI 167
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RAB2A_PONAB (Ras-related protein Rab-2A OS=Pongo abelii GN=RAB2A PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.409e-34 Identity = 65/161 (40.37%), Postives = 106/161 (65.84%), Query Frame = 1 Query: 241 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 723 K +++GD+GVGKSC++L+F +F P +T+G F ++ I + D +K +IWDTAGQE + ++ YYRG YDIT D+FN W+++ ++H + ++V+ L+GNK+DL +REV ++G +A ++G+ F+ETSAKTA N+ + F AK + Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEI 167
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RAB2A_MOUSE (Ras-related protein Rab-2A OS=Mus musculus GN=Rab2a PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.409e-34 Identity = 65/161 (40.37%), Postives = 106/161 (65.84%), Query Frame = 1 Query: 241 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 723 K +++GD+GVGKSC++L+F +F P +T+G F ++ I + D +K +IWDTAGQE + ++ YYRG YDIT D+FN W+++ ++H + ++V+ L+GNK+DL +REV ++G +A ++G+ F+ETSAKTA N+ + F AK + Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEI 167
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RAB2A_MACFA (Ras-related protein Rab-2A OS=Macaca fascicularis GN=RAB2A PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.409e-34 Identity = 65/161 (40.37%), Postives = 106/161 (65.84%), Query Frame = 1 Query: 241 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 723 K +++GD+GVGKSC++L+F +F P +T+G F ++ I + D +K +IWDTAGQE + ++ YYRG YDIT D+FN W+++ ++H + ++V+ L+GNK+DL +REV ++G +A ++G+ F+ETSAKTA N+ + F AK + Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEI 167
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RAB2A_HUMAN (Ras-related protein Rab-2A OS=Homo sapiens GN=RAB2A PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.409e-34 Identity = 65/161 (40.37%), Postives = 106/161 (65.84%), Query Frame = 1 Query: 241 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 723 K +++GD+GVGKSC++L+F +F P +T+G F ++ I + D +K +IWDTAGQE + ++ YYRG YDIT D+FN W+++ ++H + ++V+ L+GNK+DL +REV ++G +A ++G+ F+ETSAKTA N+ + F AK + Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEI 167
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RAB2A_CHICK (Ras-related protein Rab-2A OS=Gallus gallus GN=RAB2A PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.409e-34 Identity = 65/161 (40.37%), Postives = 106/161 (65.84%), Query Frame = 1 Query: 241 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 723 K +++GD+GVGKSC++L+F +F P +T+G F ++ I + D +K +IWDTAGQE + ++ YYRG YDIT D+FN W+++ ++H + ++V+ L+GNK+DL +REV ++G +A ++G+ F+ETSAKTA N+ + F AK + Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEI 167
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RAB2A_CANFA (Ras-related protein Rab-2A OS=Canis familiaris GN=RAB2A PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.409e-34 Identity = 65/161 (40.37%), Postives = 106/161 (65.84%), Query Frame = 1 Query: 241 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 723 K +++GD+GVGKSC++L+F +F P +T+G F ++ I + D +K +IWDTAGQE + ++ YYRG YDIT D+FN W+++ ++H + ++V+ L+GNK+DL +REV ++G +A ++G+ F+ETSAKTA N+ + F AK + Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEI 167
BLAST of FC873744 vs. ExPASy Swiss-Prot
Match: RAB6B_MOUSE (Ras-related protein Rab-6B OS=Mus musculus GN=Rab6b PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.146e-34 Identity = 73/175 (41.71%), Postives = 110/175 (62.86%), Query Frame = 1 Query: 205 NAGSSDAKNLR-VKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLP 726 +AG LR KLV LG+ VGK+ ++ RF+ FD T + T+G FLS+T+ L+D T V+ ++WDTAGQER+ +L P Y R YDIT+ +SF + W+ +++ D+++ LVGNK DL +KR++ ++G + A++ + FIETSAKT N+ QLF +A LP Sbjct: 2 SAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALP 175 The following BLAST results are available for this feature:
BLAST of FC873744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873744 ID=FC873744; Name=FC873744; organism=Citrus clementina; type=EST; length=814bpback to top |