FC873750
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873750 vs. ExPASy Swiss-Prot
Match: RL24_KLULA (60S ribosomal protein L24 OS=Kluyveromyces lactis GN=RPL24 PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.678e-24 Identity = 52/107 (48.60%), Postives = 74/107 (69.16%), Query Frame = 3 Query: 18 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAARE 338 +K E+ FSGAKIYPG+G F+R DS++F F +SK FH R P ++ WT +YR+ HKK I E +K+ R + K R++VGA+LE+I++RR+ KPEVR A R+ Sbjct: 1 MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQSSKSASLFHQRKNPRRIAWTVLYRRHHKKGITEEVARKRTRKSVKA-QRAVVGASLELIKERRSLKPEVRKAQRD 106
BLAST of FC873750 vs. ExPASy Swiss-Prot
Match: RL24A_YEAST (60S ribosomal protein L24-A OS=Saccharomyces cerevisiae GN=RPL24A PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.273e-24 Identity = 55/110 (50.00%), Postives = 72/110 (65.45%), Query Frame = 3 Query: 18 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAAL 347 +K E+ FSGAKIYPG+G F+R DS++F F NSK F R P ++ WT ++RK HKK I E KK+ R T K R I GA+L++I++RR+ KPEVR A RE L Sbjct: 1 MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQNSKSASLFKQRKNPRRIAWTVLFRKHHKKGITEEVAKKRSRKTVKA-QRPITGASLDLIKERRSLKPEVRKANREEKL 109
BLAST of FC873750 vs. ExPASy Swiss-Prot
Match: RL24B_YEAST (60S ribosomal protein L24-B OS=Saccharomyces cerevisiae GN=RPL24B PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.193e-24 Identity = 55/110 (50.00%), Postives = 72/110 (65.45%), Query Frame = 3 Query: 18 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAAL 347 +K E+ FSGAKIYPG+G F+R DS++F F NSK F R P ++ WT ++RK HKK I E KK+ R T K R I GA+L++I++RR+ KPEVR A RE L Sbjct: 1 MKVEVDSFSGAKIYPGRGTLFVRGDSKIFRFQNSKSASLFKQRKNPRRIAWTVLFRKHHKKGITEEVAKKRSRKTVKA-QRPITGASLDLIKERRSLKPEVRKANREEKL 109
BLAST of FC873750 vs. ExPASy Swiss-Prot
Match: RL24_NEUCR (60S ribosomal protein L24 OS=Neurospora crassa GN=rpl-24 PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.384e-23 Identity = 53/103 (51.46%), Postives = 72/103 (69.90%), Query Frame = 3 Query: 39 FSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAAL 347 FSG +IYPGKG ++R DS++F F N K + F R P ++ WT +YR+QHKK I+ E KK+ R T K R+IVGA+LEVI++RR+ +PE R AAR AA+ Sbjct: 8 FSGQRIYPGKGKLYVRGDSKIFRFQNGKSESLFLQRKNPRRIAWTVLYRRQHKKGISEEVAKKRSRRTVKA-QRAIVGASLEVIKERRSMRPEARSAARLAAI 109
BLAST of FC873750 vs. ExPASy Swiss-Prot
Match: RL24_RAT (60S ribosomal protein L24 OS=Rattus norvegicus GN=Rpl24 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.066e-23 Identity = 54/111 (48.65%), Postives = 75/111 (67.57%), Query Frame = 3 Query: 18 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKK-RRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAAL 347 +K ELC FSG KIYPG G R+ R+D +VF F N+KC+ F ++ P ++ WT +YR++HKK + E KK+ RRA K + R+I GA+L I +R +KPEVR A RE A+ Sbjct: 1 MKVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVK--FQRAITGASLADIMAKRNQKPEVRKAQREQAI 109
BLAST of FC873750 vs. ExPASy Swiss-Prot
Match: RL24_MOUSE (60S ribosomal protein L24 OS=Mus musculus GN=Rpl24 PE=2 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 4.066e-23 Identity = 54/111 (48.65%), Postives = 75/111 (67.57%), Query Frame = 3 Query: 18 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKK-RRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAAL 347 +K ELC FSG KIYPG G R+ R+D +VF F N+KC+ F ++ P ++ WT +YR++HKK + E KK+ RRA K + R+I GA+L I +R +KPEVR A RE A+ Sbjct: 1 MKVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVK--FQRAITGASLADIMAKRNQKPEVRKAQREQAI 109
BLAST of FC873750 vs. ExPASy Swiss-Prot
Match: RL24_MACFA (60S ribosomal protein L24 OS=Macaca fascicularis GN=RPL24 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.066e-23 Identity = 54/111 (48.65%), Postives = 75/111 (67.57%), Query Frame = 3 Query: 18 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKK-RRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAAL 347 +K ELC FSG KIYPG G R+ R+D +VF F N+KC+ F ++ P ++ WT +YR++HKK + E KK+ RRA K + R+I GA+L I +R +KPEVR A RE A+ Sbjct: 1 MKVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVK--FQRAITGASLADIMAKRNQKPEVRKAQREQAI 109
BLAST of FC873750 vs. ExPASy Swiss-Prot
Match: RL24_HUMAN (60S ribosomal protein L24 OS=Homo sapiens GN=RPL24 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.066e-23 Identity = 54/111 (48.65%), Postives = 75/111 (67.57%), Query Frame = 3 Query: 18 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKK-RRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAAL 347 +K ELC FSG KIYPG G R+ R+D +VF F N+KC+ F ++ P ++ WT +YR++HKK + E KK+ RRA K + R+I GA+L I +R +KPEVR A RE A+ Sbjct: 1 MKVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVK--FQRAITGASLADIMAKRNQKPEVRKAQREQAI 109
BLAST of FC873750 vs. ExPASy Swiss-Prot
Match: RL24_FELCA (60S ribosomal protein L24 OS=Felis catus GN=RPL24 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.066e-23 Identity = 54/111 (48.65%), Postives = 75/111 (67.57%), Query Frame = 3 Query: 18 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKK-RRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAAL 347 +K ELC FSG KIYPG G R+ R+D +VF F N+KC+ F ++ P ++ WT +YR++HKK + E KK+ RRA K + R+I GA+L I +R +KPEVR A RE A+ Sbjct: 1 MKVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVK--FQRAITGASLADIMAKRNQKPEVRKAQREQAI 109
BLAST of FC873750 vs. ExPASy Swiss-Prot
Match: RL24_BOVIN (60S ribosomal protein L24 OS=Bos taurus GN=RPL24 PE=2 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 4.066e-23 Identity = 54/111 (48.65%), Postives = 75/111 (67.57%), Query Frame = 3 Query: 18 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKK-RRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAAL 347 +K ELC FSG KIYPG G R+ R+D +VF F N+KC+ F ++ P ++ WT +YR++HKK + E KK+ RRA K + R+I GA+L I +R +KPEVR A RE A+ Sbjct: 1 MKVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVK--FQRAITGASLADIMAKRNQKPEVRKAQREQAI 109 The following BLAST results are available for this feature:
BLAST of FC873750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873750 ID=FC873750; Name=FC873750; organism=Citrus clementina; type=EST; length=681bpback to top |