FC873750
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873750 vs. ExPASy Swiss-Prot
Match: RL24_PAGMA (60S ribosomal protein L24 OS=Pagrus major GN=rpl24 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 6.936e-23 Identity = 54/111 (48.65%), Postives = 73/111 (65.77%), Query Frame = 3 Query: 18 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKK-RRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAAL 347 +K ELC FSG KIYPG G R+ R D +VF F N+KC+ F + P ++ WT +YR++HKK + E KK+ RRA K + R+I GA+L I +R +KPEVR A RE A+ Sbjct: 1 MKVELCSFSGYKIYPGHGRRYARIDGKVFQFLNAKCESAFLAKRNPRQINWTVLYRRKHKKGQSEEVAKKRTRRAVK--FQRAITGASLAEIMAKRNQKPEVRKAQREQAI 109
BLAST of FC873750 vs. ExPASy Swiss-Prot
Match: RL24_GILMI (60S ribosomal protein L24 OS=Gillichthys mirabilis GN=rpl24 PE=2 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 6.936e-23 Identity = 54/111 (48.65%), Postives = 73/111 (65.77%), Query Frame = 3 Query: 18 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKK-RRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAAL 347 +K ELC FSG KIYPG G R+ R D +VF F N+KC+ F + P ++ WT +YR++HKK + E KK+ RRA K + R+I GA+L I +R +KPEVR A RE A+ Sbjct: 1 MKVELCSFSGYKIYPGHGRRYARIDGKVFQFLNAKCESAFLAKRNPRQINWTVLYRRKHKKGQSEEVTKKRTRRAVK--FQRAITGASLAEIMAKRNQKPEVRKAQREQAI 109
BLAST of FC873750 vs. ExPASy Swiss-Prot
Match: RL24_BRABE (60S ribosomal protein L24 OS=Branchiostoma belcheri GN=RPL24 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 6.936e-23 Identity = 52/110 (47.27%), Postives = 73/110 (66.36%), Query Frame = 3 Query: 18 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAAL 347 +K ELC +SG KIYPG G R+ R+D +V+ F N+KC+ F + P ++TWT +YR++HKK E KK+ R T K + R+I GA+L I +R +KPEVR A RE A+ Sbjct: 1 MKIELCLYSGYKIYPGHGKRYARTDGRVYTFLNAKCEASFLMKRNPREITWTVLYRRKHKKGQQEEIQKKRSRRTAK-FQRAITGASLTEIMAKRNQKPEVRKAQREQAV 109
BLAST of FC873750 vs. ExPASy Swiss-Prot
Match: RL24_DANRE (60S ribosomal protein L24 OS=Danio rerio GN=rpl24 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.058e-23 Identity = 54/111 (48.65%), Postives = 74/111 (66.67%), Query Frame = 3 Query: 18 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKK-RRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAAL 347 +K ELC FSG KIYPG G R+ R D +VF F N+KC+ F ++ P ++ WT +YR++HKK + E KK+ RRA K + R+I GA+L I +R +KPEVR A RE A+ Sbjct: 1 MKVELCSFSGYKIYPGHGRRYARVDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEVSKKRTRRAVK--FQRAITGASLAEILAKRNQKPEVRKAQREQAI 109
BLAST of FC873750 vs. ExPASy Swiss-Prot
Match: RL24_DICDI (60S ribosomal protein L24 OS=Dictyostelium discoideum GN=rpl24 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.545e-22 Identity = 51/109 (46.79%), Postives = 74/109 (67.89%), Query Frame = 3 Query: 18 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAA 344 +KT LC +S KIYP +G++F+R DS+VF F N+K + F ++ P + W+ +YR+ +K + KKK R TKK R+IVGA+LEVIQ++R +KPEV+ AA E A Sbjct: 1 MKTSLCNYSEFKIYPARGMKFVRGDSKVFHFINTKVESLFFRKINPRDIRWSMVYRRIYKNTTTDVSAKKKARKTKK-VERNIVGASLEVIQQKRAQKPEVKQAAAEQA 108
BLAST of FC873750 vs. ExPASy Swiss-Prot
Match: RL24_ICTPU (60S ribosomal protein L24 OS=Ictalurus punctatus GN=rpl24 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.871e-22 Identity = 53/111 (47.75%), Postives = 72/111 (64.86%), Query Frame = 3 Query: 18 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKK-RRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAAL 347 +K ELC FSG KIYPG G + R D +VF F N+KC+ F + P ++ WT +YR++HKK + E KK+ RRA K + R+I GA+L I +R +KPEVR A RE A+ Sbjct: 1 MKVELCSFSGYKIYPGHGPVYARIDGKVFQFLNAKCESAFLTKRNPRQINWTVLYRRKHKKGQSEEVTKKRTRRAVK--FQRAITGASLAEILAKRNQKPEVRKAQREQAI 109
BLAST of FC873750 vs. ExPASy Swiss-Prot
Match: RL24_DROME (60S ribosomal protein L24 OS=Drosophila melanogaster GN=RpL24 PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.001e-21 Identity = 51/110 (46.36%), Postives = 72/110 (65.45%), Query Frame = 3 Query: 18 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAAL 347 +K LC FSG KIYPG G ++ D + F F + KC+R + + P K+TWT +YR++H+K I EA KK+ R T+K + R+IVGA+L I +R KPEVR A R+ A+ Sbjct: 1 MKIGLCAFSGYKIYPGHGKTMVKIDGKSFTFLDKKCERSYLMKRNPRKVTWTVLYRRKHRKGIEEEASKKRTRRTQK-FQRAIVGASLAEILAKRNMKPEVRKAQRDQAI 109
BLAST of FC873750 vs. ExPASy Swiss-Prot
Match: RL24_YARLI (60S ribosomal protein L24 OS=Yarrowia lipolytica GN=RPL24 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.308e-21 Identity = 50/106 (47.17%), Postives = 70/106 (66.04%), Query Frame = 3 Query: 18 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAR 335 +K EL FSG KIYPG+G F+R DS++F F +SK F R P ++ WT +YR++HKK I E KK+ R + K R IVGA+L+VI+++R +PE R+A R Sbjct: 1 MKIELDSFSGNKIYPGRGTLFVRGDSKIFRFYSSKTASLFKQRKNPRRIAWTVLYRRKHKKGITEEVSKKRSRKSVKAV-RGIVGASLDVIKEKRNARPETRNATR 105
BLAST of FC873750 vs. ExPASy Swiss-Prot
Match: RL24_SPOFR (60S ribosomal protein L24 OS=Spodoptera frugiperda GN=RpL24 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.107e-20 Identity = 51/110 (46.36%), Postives = 68/110 (61.82%), Query Frame = 3 Query: 18 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAAL 347 +K LC +SG KIYPG G ++ D + F F NSKC+ R P K+TWT +YR++ KK E KK+ R T+K Y R+IVGA+L I +R KPEVR A R+ A+ Sbjct: 1 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEQTKKRTRRTQK-YQRAIVGASLSDIMAKRNMKPEVRKAQRDQAI 109
BLAST of FC873750 vs. ExPASy Swiss-Prot
Match: RL24_PLUXY (60S ribosomal protein L24 OS=Plutella xylostella GN=RpL24 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.107e-20 Identity = 52/110 (47.27%), Postives = 68/110 (61.82%), Query Frame = 3 Query: 18 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAAL 347 +K LC +SG KIYPG G ++ D + F F NSKC+ R P K+TWT +YR++ KK E KK+ R T+K Y R+IVGA+L I +R KPEVR A RE A+ Sbjct: 1 MKIGLCAYSGYKIYPGHGKTMVKVDGKNFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEQAKKRTRRTQK-YQRAIVGASLSDIMAKRNMKPEVRKAQREQAI 109 The following BLAST results are available for this feature:
BLAST of FC873750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873750 ID=FC873750; Name=FC873750; organism=Citrus clementina; type=EST; length=681bpback to top |