FC873754
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873754 vs. ExPASy Swiss-Prot
Match: GL123_ORYSJ (Putative germin-like protein 12-3 OS=Oryza sativa subsp. japonica GN=Os12g0154900 PE=3 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 1.735e-51 Identity = 107/219 (48.86%), Postives = 152/219 (69.41%), Query Frame = 1 Query: 7 STYLLIFSIIAGV----LAVDPDTLQDVCVADTSSGVKVNGFACKDSANITADDFFFAG-LAKP-GVVNNSVGSLVTAANVEKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFIST-----ADKLISKTVKKGEIYVFPKALVHFQKN-NGDKPASVISAFNSQLPGTQSIAATLFTATPPVPDNVLTKAFQVGTKEIEKIKSK 627 S + L+ +IA V +A DP LQD+CVAD +S V+VNGF CKD+ +++ DDFF A L KP + + GS VT NV K+ GLNTLG+S++RIDY G NPPHTHPRATE++ V+EG L VGF+++ +KL +KT+ KG+++VFP+ L+HFQ N + DKPA+ I A +SQ PG +IA +F + PP+ D+VL KAFQV K ++ ++++ Sbjct: 4 SNFFLLIPLIALVTTQAMASDPSPLQDLCVADKNSPVRVNGFPCKDAKDVSVDDFFLAANLDKPMDITKSKAGSNVTLINVMKLAGLNTLGISMARIDYAPKGQNPPHTHPRATEILSVIEGSLYVGFVTSNQANGENKLFTKTLNKGDVFVFPEGLIHFQFNPSYDKPAAAIVALSSQNPGAITIANAVFGSNPPISDDVLAKAFQVDKKAVDWLQAQ 222
BLAST of FC873754 vs. ExPASy Swiss-Prot
Match: GL84_ORYSJ (Germin-like protein 8-4 OS=Oryza sativa subsp. japonica GN=GER1 PE=2 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 6.593e-51 Identity = 107/197 (54.31%), Postives = 136/197 (69.04%), Query Frame = 1 Query: 46 LAVDPDTLQDVCVADTSSGVKVNGFACKDSANITADDFFFAG-LAKPGVVNNSVGSLVTAANVEKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFI-STADKLISKTVKKGEIYVFPKALVHFQKN-NGDKPASVISAFNSQLPGTQSIAATLFTATPPVPDNVLTKAFQVGTKEIEKIKSK 627 +A DP LQD CVAD S V+VNGF CK+ + +DDFF A P N VGS VT NV PGLNTLG+SL+RIDY G+NPPH HPRATE++ VLEG L VGF+ S ++L SK V KG+ +VFPKA++HFQ N + +KPA S+ NSQ PG +IA+ +F + PP+ D+VLTKAFQV K I+ +KS+ Sbjct: 22 IAFDPSPLQDFCVADMKSPVRVNGFPCKNPMEVNSDDFFNAAKFDMPRSTMNKVGSNVTNLNVLNFPGLNTLGISLARIDYAPLGVNPPHIHPRATELLTVLEGTLYVGFVTSNPNRLFSKVVHKGDTFVFPKAMIHFQMNLDHNKPAVAQSSLNSQNPGVITIASAVFGSKPPISDDVLTKAFQVEKKVIDWLKSQ 218
BLAST of FC873754 vs. ExPASy Swiss-Prot
Match: GL121_ORYSJ (Germin-like protein 12-1 OS=Oryza sativa subsp. japonica GN=Os12g0154700 PE=2 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 3.272e-50 Identity = 104/211 (49.29%), Postives = 143/211 (67.77%), Query Frame = 1 Query: 19 LIFSIIAGVLAVDPDTLQDVCVADTSSGVKVNGFACKDSANITADDFFF-AGLAKP-GVVNNSVGSLVTAANVEKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFIST-----ADKLISKTVKKGEIYVFPKALVHFQKN-NGDKPASVISAFNSQLPGTQSIAATLFTATPPVPDNVLTKAFQVGTKEIEKIKSK 627 LI + +A DP LQD CVAD +S V+VNGF CKD+ ++ DDFF A L KP + GS VT NV K+ GLNTLG+S++RIDY G NPPHTHPRATE++ V EG L VGF+++ +KL +KT+ KG+++VFP+ L+HFQ N + DKPA I+A +SQ PG +IA +F + PP+ D+VL KAFQV K ++ ++++ Sbjct: 12 LIALVATQAMAFDPSPLQDFCVADRNSPVRVNGFPCKDAKDVNVDDFFLEANLDKPMDTTKSKAGSNVTLINVMKLTGLNTLGISMARIDYAPKGQNPPHTHPRATEILTVFEGTLYVGFVTSNQANGENKLFTKTLNKGDVFVFPQGLIHFQFNPSYDKPAVAIAALSSQNPGAITIANAVFGSNPPISDDVLAKAFQVDKKAVDWLQAQ 222
BLAST of FC873754 vs. ExPASy Swiss-Prot
Match: GL122_ORYSJ (Germin-like protein 12-2 OS=Oryza sativa subsp. japonica GN=Os12g0154800 PE=2 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 1.243e-49 Identity = 107/219 (48.86%), Postives = 148/219 (67.58%), Query Frame = 1 Query: 7 STYLLIFSIIAGV----LAVDPDTLQDVCVADTSSGVKVNGFACKDSANITADDFFFAG-LAKP-GVVNNSVGSLVTAANVEKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFIST-----ADKLISKTVKKGEIYVFPKALVHFQKN-NGDKPASVISAFNSQLPGTQSIAATLFTATPPVPDNVLTKAFQVGTKEIEKIKSK 627 S + L+ ++IA V +A DP LQD CVAD +S V VNGF CKD+ ++ DDFF A L KP + GS VT NV K+ GLNTLG+S++RIDY G NPPHTHPRATE++ VLEG L VGF+++ +KL +KT+ KG+++VFP+ L+HFQ N + DKPA I+A +SQ PG +IA +F + P+ D+VL KAFQV K ++ ++++ Sbjct: 4 SNFFLLTALIALVATQAMASDPSPLQDFCVADRNSPVHVNGFPCKDAKDVNVDDFFLAANLDKPMDTTKSKAGSNVTLINVMKLAGLNTLGISMARIDYAPKGQNPPHTHPRATEILTVLEGTLYVGFVTSNQANGENKLFTKTLNKGDVFVFPQGLIHFQFNPSYDKPAVAIAALSSQNPGAITIANAVFGSNSPISDDVLAKAFQVDKKAVDWLQAQ 222
BLAST of FC873754 vs. ExPASy Swiss-Prot
Match: GL89_ORYSJ (Germin-like protein 8-9 OS=Oryza sativa subsp. japonica GN=Os08g0189850 PE=2 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 3.618e-49 Identity = 108/212 (50.94%), Postives = 140/212 (66.04%), Query Frame = 1 Query: 1 LFSTYLLIFSIIAGVLAVDPDTLQDVCVADTSSGVKVNGFACKDSANITADDFFFAGLAKPGVVNNSVGSLVTAANVEKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFIST--ADKLISKTVKKGEIYVFPKALVHFQKN-NGDKPASVISAFNSQLPGTQSIAATLFTATPPVPDNVLTKAFQVGTKEIEKIKSK 627 LF+ L + S A +A DP LQD CVAD S V VNGFAC D +TAD FF A + N VGS VT NV +IPGLNTLG+S++RIDY G NPPHTHPRATE++ VLEG L VGF+++ + L SK + KG+++VFP L+HFQ N N +PA I+A +SQ PG +IA +F + PP+ D VL KAFQVG I+ ++++ Sbjct: 8 LFAALLALVSWQA--IASDPSPLQDFCVADKHSPVLVNGFACLDPKYVTADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTVLEGTLHVGFVTSNPNNTLFSKVLNKGDVFVFPVGLIHFQFNPNPHQPAVAIAALSSQNPGVITIANAVFGSKPPISDEVLAKAFQVGKGTIDWLQAQ 217
BLAST of FC873754 vs. ExPASy Swiss-Prot
Match: GL112_ARATH (Putative germin-like protein subfamily 1 member 12 OS=Arabidopsis thaliana GN=At5g38960 PE=2 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 3.618e-49 Identity = 104/210 (49.52%), Postives = 138/210 (65.71%), Query Frame = 1 Query: 13 YLLIFSIIAGVLAVDPDTLQDVCVA--DTSSGVKVNGFACKDSANITADDFFFAGLAKPGVVNNS-VGSLVTAANVEKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFIST--ADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAFNSQLPGTQSIAATLFTATPPVPDNVLTKAFQVGTKEIEKIKSK 627 YLL S + +A DP LQD C+ ++ + VNG CKD +TADDF+F+GL K +S VGS VT NV +IPGLNTLG+SL RIDY G NPPHTHPRATE++ V EG L VGF S+ ++L +KT+ KG+++VFP+ L+HFQ N G +PA ++ +SQ PG I TLF + PP+ NVL KAFQ+ K I +++ K Sbjct: 12 YLLAASTLPFAIASDPSPLQDFCIGVNTPANALFVNGKFCKDPKLVTADDFYFSGLDKARTTESSPVGSNVTTVNVNQIPGLNTLGISLVRIDYGINGQNPPHTHPRATEILLVQEGTLFVGFFSSFPENRLFNKTLNKGDVFVFPEGLIHFQVNIGKQPAVAFASLSSQNPGVIIIGNTLFGSKPPIDPNVLAKAFQLDPKVIIQLQKK 221
BLAST of FC873754 vs. ExPASy Swiss-Prot
Match: GL41_ORYSJ (Germin-like protein 4-1 OS=Oryza sativa subsp. japonica GN=Os04g0617900 PE=2 SV=2) HSP 1 Score: 194.897 bits (494), Expect = 4.725e-49 Identity = 99/208 (47.60%), Postives = 137/208 (65.87%), Query Frame = 1 Query: 28 SIIAGVLAVDPDTLQDVCVADTSSGVKVNGFACKDSANITADDFFFA-GLAKPGVVNNSVGSLVTAANVEKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFIST-----ADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAFNSQLPGTQSIAATLFTATPPVPDNVLTKAFQVGTKEIEKIKSKLA 633 S++ LA DP LQD CVAD S V VNGF CK+ +TA+DFF L PG N+ GS VT V ++PGLNTLG+S +RID+ G NPPHTHPRATE++ VL+G L VGF+++ + +K + G+++VFP+ L+HFQ NNG PA I+A +SQ PG +IA +F +TPP+ D+VL KAF + +++ I++K A Sbjct: 20 SVLPRALASDPSQLQDFCVADKLSAVFVNGFVCKNPKQVTANDFFLPKALGVPGNTVNAQGSAVTPVTVNELPGLNTLGISFARIDFAPNGQNPPHTHPRATEILTVLQGTLLVGFVTSNQPGGGNLQFTKLLGPGDVFVFPQGLIHFQLNNGAVPAVAIAALSSQNPGVITIANAVFGSTPPILDDVLAKAFMIDKDQVDWIQAKFA 227
BLAST of FC873754 vs. ExPASy Swiss-Prot
Match: GL124_ORYSJ (Putative germin-like protein 12-4 OS=Oryza sativa subsp. japonica GN=Os12g0155000 PE=3 SV=2) HSP 1 Score: 194.126 bits (492), Expect = 8.059e-49 Identity = 106/219 (48.40%), Postives = 147/219 (67.12%), Query Frame = 1 Query: 7 STYLLIFSIIAGV----LAVDPDTLQDVCVADTSSGVKVNGFACKDSANITADDFFFAG-LAKP-GVVNNSVGSLVTAANVEKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFIST-----ADKLISKTVKKGEIYVFPKALVHFQKN-NGDKPASVISAFNSQLPGTQSIAATLFTATPPVPDNVLTKAFQVGTKEIEKIKSK 627 S + L+ + IA V +A DP LQD CVAD S V+VNG CKD+ +++ DDFF A L KP + GS VT NV K+ GLNTL +S++RIDY G NPPHTHPRATE++ VLEG L VGF+++ +KL +KT+ KG+++VFP+ L+HFQ N + DKPA I+A +SQ PG +IA +F + PP+ D+VL KAFQV K ++ ++++ Sbjct: 4 SNFFLLTAFIALVATQAMASDPSPLQDFCVADKHSPVRVNGLPCKDAKDVSVDDFFLAANLDKPMDTTKSKAGSNVTLINVMKLAGLNTLSISMARIDYAPKGQNPPHTHPRATEILTVLEGSLYVGFVTSNQANRENKLFTKTLNKGDVFVFPQGLIHFQFNPSYDKPAVAIAALSSQNPGAITIANAVFGSHPPISDDVLAKAFQVDKKAMDWLQAQ 222
BLAST of FC873754 vs. ExPASy Swiss-Prot
Match: GL38_ORYSJ (Germin-like protein 3-8 OS=Oryza sativa subsp. japonica GN=Os03g0804700 PE=2 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.375e-48 Identity = 104/219 (47.49%), Postives = 138/219 (63.01%), Query Frame = 1 Query: 7 STYLLIFSIIAGVLA----VDPDTLQDVCVA------DTSSGV--KVNGFACKDSANITADDFFFAGLAKPGVVNNSVGSLVTAANVEKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAFNSQLPGTQSIAATLFTATPPVPDNVLTKAFQVGTKEIEKIKSK 627 S LL+ S VLA DP+ +QD CVA D ++ GF CK ++ + +DDFFFAGLA +N G VTAAN E PGLNTLGVS+ R+D GG+NP H+HPRATE+I V+ G + GF+STA + SK + +GE +V P+ ++HFQ N G A VI+AFNSQ+PG + +TLF + P +PD VL K+FQV K I+ +KSK Sbjct: 6 SAPLLVLSAALAVLASTCIADPEPVQDFCVAVVPRAGDAAAAACPAYPGFPCKPASTVVSDDFFFAGLAVASDTDNRFGFNVTAANAETFPGLNTLGVSIGRVDLAPGGVNPLHSHPRATELIHVVAGRVLAGFVSTAGEFYSKVLGEGETFVVPRGMIHFQYNVGGVAAQVITAFNSQMPGVVAAGSTLFGSDPEIPDAVLAKSFQVDAKIIKLLKSK 224
BLAST of FC873754 vs. ExPASy Swiss-Prot
Match: GLT2_ARATH (Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana GN=At1g18980 PE=2 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.795e-48 Identity = 97/212 (45.75%), Postives = 139/212 (65.57%), Query Frame = 1 Query: 1 LFSTYLLIFSI-IAGVLAVDPDTLQDVCVADTSSGVKVNGFACKDSANITADDFFFAGLAKPGVVNNSVGSLVTAANVEKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAFNSQLPGTQSIAATLFTATPPVPDNVLTKAFQVGTKEIEKIKSKLA 633 LF ++LL+ + + L+ D D LQD CV D + +NGF CK S ++A DFFF+GL P + G V+ ANV PGLNTLG+S++ +++ GG+NPPH+HPRATE V+EG + VGF++T + L SK + GE++V P+ LVHFQ N G A +I++FNSQLPG+ + +TLF + P +P+ VLTK F+ + K+KSK A Sbjct: 10 LFRSFLLVICVFVIPSLSSDSDPLQDFCVGDLKASPSINGFPCKSS--VSASDFFFSGLGGPLNTSTPNGVAVSPANVLTFPGLNTLGLSMNNVEFAPGGVNPPHSHPRATEAGVVIEGSVFVGFLTTNNTLFSKVLNAGEMFVVPRGLVHFQWNVGKVKARLITSFNSQLPGSAVLPSTLFGSNPTIPNAVLTKTFRTDDVTVNKLKSKFA 219 The following BLAST results are available for this feature:
BLAST of FC873754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873754 ID=FC873754; Name=FC873754; organism=Citrus clementina; type=EST; length=834bpback to top |