FC873754
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873754 vs. ExPASy Swiss-Prot
Match: GL34_ARATH (Germin-like protein subfamily 3 member 4 OS=Arabidopsis thaliana GN=At5g61750 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 5.803e-31 Identity = 70/175 (40.00%), Postives = 108/175 (61.71%), Query Frame = 1 Query: 16 LLIFSIIAGVLAVDPDTLQDVCVADTSSGVK----VNGFACKDSANITADDFFFAGLAKPGVVNNSVGSLVTAANVEKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAFNSQLPGTQSI 528 +++F I ++ D D +QD C T+ G + +NG+ CK+ ITA DF L + G +N + S VT + PGLNTLG+S+SR D E G P H+HPR++EM+FV++G + GF+ T +K+ ++KG+++VFPK L+HF + G +PA+ S +NSQ PG +I Sbjct: 6 VIVFCAIFLSVSGDSDNMQDTC--PTAPGEQSIFFINGYPCKNPTKITAQDFKSTKLTEAGDTDNYLQSNVTLLTALEFPGLNTLGLSVSRTDLERDGSVPFHSHPRSSEMLFVVKGVVFAGFVDTNNKIFQTVLQKGDVFVFPKGLLHFCLSGGFEPATAFSFYNSQNPGVVNI 178
BLAST of FC873754 vs. ExPASy Swiss-Prot
Match: GLP1_BRANA (Germin-like protein 1 OS=Brassica napus GN=GER1 PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 7.578e-31 Identity = 69/179 (38.55%), Postives = 106/179 (59.22%), Query Frame = 1 Query: 16 LLIFSIIAGVLAVDPDTLQDVCVADTSSGVKVNGFACKDSANITADDFFFAGLAKPGVVNNSVGSLVTAANVEKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAFNSQLPGTQSIAATLFTAT 552 L I +++ + A+ D++QD CVA+ G+ C ++ A DF F+ L PG N + + VT V + P LN LG+S +R+D G+ P HTHP A+E++FVL+G + GFIS+A+ + +T+K G++ VFP+ L+HFQ N G PA+ + F+S PG Q + LF T Sbjct: 2 LRIIFLLSLLFALSNDSVQDFCVANLKRAETPAGYPCIRPIHVKASDFVFS-LGTPGNTTNIISAAVTPGFVAQFPALNGLGISTARLDLAPKGVIPMHTHPGASEVLFVLDGSITAGFISSANSVYVQTLKPGQVMVFPQGLLHFQINAGKTPAAALVTFSSASPGLQILDFALFANT 179
BLAST of FC873754 vs. ExPASy Swiss-Prot
Match: GL111_ORYSJ (Germin-like protein 11-1 OS=Oryza sativa subsp. japonica GN=Os11g0537300 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.293e-30 Identity = 73/192 (38.02%), Postives = 101/192 (52.60%), Query Frame = 1 Query: 13 YLLIFSIIAGVLAVDPDTLQDVCVADTSSGVKV--NGFACKDSANITADDFFFAGLAKPGVVNNSVGSLVTAANVEKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAFNSQLPGTQSIAATLFTATPPVPDNVLTK 582 YLL+ + A + D LQDVC K+ NGF CK + I A DF L G ++N V S + PGLNTLG+S++R D G PH+HPRA+EM+FV G + GF T KL KT+ +G++++FP+ LVHF N G A+ S NSQ PG I +F V + ++ + Sbjct: 10 YLLLLGLFAPEIISDSPPLQDVCPMAPQGERKLFMNGFFCKSPSTIMASDFKTLLLNHAGDLDNMVRSSANIITATEFPGLNTLGISMARTDIAVSGAVLPHSHPRASEMMFVHSGSVVAGFFDTKGKLFQKTLAEGDVFIFPRGLVHFIMNYGFGLATTFSVLNSQNPGVVGITHAMFAPDSEVAEGLMAR 201
BLAST of FC873754 vs. ExPASy Swiss-Prot
Match: GL92_ORYSJ (Putative germin-like protein 9-2 OS=Oryza sativa subsp. japonica GN=Os09g0568600 PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.205e-30 Identity = 82/220 (37.27%), Postives = 119/220 (54.09%), Query Frame = 1 Query: 4 FSTYLLIFSIIAG----VLAVDPDTLQDVCVADTSSGVKVNGFACKDSANITADDFFFAGLAKPGVVNNSVGS-----LVTAANVEKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAFNSQLPGTQSIAATLFTATPPVPDNVLTKAFQVGTKEIEKIKSKLAP 636 +S LL+ ++ A V+A DPD L D + NG + NIT D F F G K V N S VT A + + P LN VS + + + +NPPHTHPR+ E++ V++G L VGFI T +KL ++ + G+++VFPK +VHFQ N+G++PA +SAF S PG + T+F + D VL K+F+ I K+K+ L P Sbjct: 6 YSLLLLLLAVWAPALTLVMAGDPDILTDYVIP-------ANG----NPMNITGDFFTFTGFRK--VFNTSSAPEPNSFTVTKATMAEFPALNGQSVSYATLVFPPSTVNPPHTHPRSAELLLVVDGALSVGFIDTTNKLYTQDLAAGDMFVFPKGMVHFQFNSGNQPAMALSAFGSAAPGVVPVPVTVFGT--GIDDAVLAKSFKTDVPTILKLKANLTP 210
BLAST of FC873754 vs. ExPASy Swiss-Prot
Match: GL814_ORYSJ (Germin-like protein 8-14 OS=Oryza sativa subsp. japonica GN=GER5 PE=1 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 4.158e-29 Identity = 78/211 (36.97%), Postives = 119/211 (56.40%), Query Frame = 1 Query: 1 LFSTYLLIFSIIAGVLAVDPDTLQDVCVADTSSGVKVNGFACKDSANITADDFFFAGLAKPGVVNNSVGSLVTAANVEKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFI-STADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAFNSQLPGTQSIAATLFTATPPVPDNVLTKAFQVGTKEIEKIKSKL 630 L S LL FS +A QD CVAD + G+ CK A++ A DF + GLA G +N + + VT A V + PG+N LG+S +R+D GG+ P HTHP A+E++FV +G + GFI S+++ + ++T+ G+I VFP+ L+H+Q N G A + AF+ PG Q LF +P ++ K + +++K+KS L Sbjct: 11 LLSFLLLPFSSMA--------LTQDFCVADLTCSDTPAGYPCK--ASVGAGDFAYHGLAAAGNTSNLIKAAVTPAFVGQFPGVNGLGISAARLDIAVGGVVPLHTHPAASELLFVTQGTVAAGFITSSSNTVYTRTLYAGDIMVFPQGLLHYQYNAGQSAAVALVAFSGPNPGLQITDYALFANN--LPSAIVEKVTFLDDAQVKKLKSVL 209
BLAST of FC873754 vs. ExPASy Swiss-Prot
Match: GLP1_IPONI (Germin-like protein OS=Ipomoea nil GN=GLP PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.303e-26 Identity = 67/174 (38.51%), Postives = 102/174 (58.62%), Query Frame = 1 Query: 4 FSTYLLIFSIIAGVLAVDPDTLQDVCVADTSSGVKV-NGFACKDSANITADDFFFAGLAKPGVVNNSVGSLVTAANVEKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAFNSQLPGTQ 522 F +LL F + +V+ D CVA+ +GF CK++A +TA DF ++GLAKPG N + + VT A V + PG+ LGV+L+R+D GG+ P HTHP A+E++ V+EG + FIS+ +K+ K + G++ VFP+ L+ FQ+ G K A + + PG Q Sbjct: 8 FFLFLLAFPVFTANASVN-----DFCVANGPGARDTPSGFVCKNTAKVTAADFVYSGLAKPGNTTNIINAAVTPAFVGQFPGVIGLGVTLARLDLAPGGVIPMHTHPGASEILNVVEGTILAAFISSGNKVYEKALYPGDVMVFPQGLLDFQEITG-KIAPGLCELRQRNPGLQ 175
BLAST of FC873754 vs. ExPASy Swiss-Prot
Match: GL91_ORYSJ (Germin-like protein 9-1 OS=Oryza sativa subsp. japonica GN=Os09g0568500 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.453e-23 Identity = 74/212 (34.91%), Postives = 110/212 (51.89%), Query Frame = 1 Query: 16 LLIFSIIAGVLAVDPDTLQDVCV-ADTS-SGVKVNGFACKDSANITADDFFFAGLAKPGVVNNSVGSLVTAANVEKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTA--DKLISKTVKKGEIYVFPKALVHFQKNNG-DKPASVISAFNSQLPGTQSIAATLFTATPPVPDNVLTKAFQVGTKEIEKIKSKLAP 636 LL+ ++I A DPD L D V +DT SG+ D A T + P + VT A + P L VS + + + AG +NPPH HPRA+E++ V++G L VG + A + ++T++ G+++VFPK +VHFQ NNG D A SAF S PGT S+ A LF + + D +L K+ ++++K AP Sbjct: 14 LLLLAVILSAGAADPDILTDFVVPSDTDPSGI--------DGAFFTYKNLVTGNSGDPAKLT------VTKATHAEFPALLGQSVSYAALVFGAGTVNPPHIHPRASELLVVVQGPLLVGLVDAARNGTVYTQTLQTGDMFVFPKGMVHFQFNNGTDVVARAFSAFGSATPGTISLPAALFGS--GIDDTILDKSMHTDQATVDQLKQDQAP 209
BLAST of FC873754 vs. ExPASy Swiss-Prot
Match: SR1A_PHYPO (Spherulin-1A OS=Physarum polycephalum PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.614e-15 Identity = 42/119 (35.29%), Postives = 66/119 (55.46%), Query Frame = 1 Query: 190 VNNSVGSLVTAANVEKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGF-ISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAFNSQLPGTQSIAATLF 543 V G A + P + V+++ EA G+N PHTHPRATE+ F+ G+ + GF + K I T++ G VFP+ +HF+ N +PA ++AFN++ PG Q+ A++ F Sbjct: 83 VTQGTGGKTVATSRTNFPAVIGHNVAMTVGFIEACGINLPHTHPRATEINFIASGKFEAGFFLENQAKFIGHTLEAGMATVFPQGAIHFEINMNCEPAMFVAAFNNEDPGVQTTASSFF 201
BLAST of FC873754 vs. ExPASy Swiss-Prot
Match: SR1B_PHYPO (Spherulin-1B OS=Physarum polycephalum PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.449e-13 Identity = 40/119 (33.61%), Postives = 65/119 (54.62%), Query Frame = 1 Query: 190 VNNSVGSLVTAANVEKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVG-FISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAFNSQLPGTQSIAATLF 543 V S G A + P + ++++ EA G+N PHTHPRATE+ F+ +G G F+ I +++G VFP+ +HF+ N +PA ++AFN++ PG Q+ A++ F Sbjct: 70 VTQSAGGKTVATSRTDFPAVIGHNIAMTVGFIEACGINLPHTHPRATEINFIAKGRFQAGFFLENQATFIGHILEEGMATVFPQGAIHFEINLECEPAMFVAAFNNEDPGVQTTASSFF 188 The following BLAST results are available for this feature:
BLAST of FC873754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873754 ID=FC873754; Name=FC873754; organism=Citrus clementina; type=EST; length=834bpback to top |