FC873784

Overview
NameFC873784
Unique NameFC873784
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length831
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC873784 vs. ExPASy Swiss-Prot
Match: YPEL2_HUMAN (Protein yippee-like 2 OS=Homo sapiens GN=YPEL2 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.127e-12
Identity = 28/54 (51.85%), Postives = 40/54 (74.07%), Query Frame = 2 
Query:  227 VNIMLGPQEERLMLSGMHTVEDIFCCCCGQIVGWKYVAAHDKNQKYKEGKFVLE 388
            VN+  GP EER++L+G+H V DI+C  C   +GWKY  A + +QKYKEGK+++E
Sbjct:   55 VNVGCGPAEERVLLTGLHAVADIYCENCKTTLGWKYEHAFESSQKYKEGKYIIE 108

HSP 2 Score: 22.3274 bits (46), Expect = 3.127e-12
Identity = 8/18 (44.44%), Postives = 11/18 (61.11%), Query Frame = 1 
Query:  169 YKCRFCNSHLALADSVLS 222
            Y C  C +HLA  D ++S
Sbjct:   21 YSCIHCRAHLANHDELIS 38
[Close]
BLAST of FC873784 vs. ExPASy Swiss-Prot
Match: YPEL2_CERAE (Protein yippee-like 2 OS=Cercopithecus aethiops GN=YPEL2 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.127e-12
Identity = 28/54 (51.85%), Postives = 40/54 (74.07%), Query Frame = 2 
Query:  227 VNIMLGPQEERLMLSGMHTVEDIFCCCCGQIVGWKYVAAHDKNQKYKEGKFVLE 388
            VN+  GP EER++L+G+H V DI+C  C   +GWKY  A + +QKYKEGK+++E
Sbjct:   55 VNVGCGPAEERVLLTGLHAVADIYCENCKTTLGWKYEHAFESSQKYKEGKYIIE 108

HSP 2 Score: 22.3274 bits (46), Expect = 3.127e-12
Identity = 8/18 (44.44%), Postives = 11/18 (61.11%), Query Frame = 1 
Query:  169 YKCRFCNSHLALADSVLS 222
            Y C  C +HLA  D ++S
Sbjct:   21 YSCIHCRAHLANHDELIS 38
[Close]
BLAST of FC873784 vs. ExPASy Swiss-Prot
Match: YPEL2_BOVIN (Protein yippee-like 2 OS=Bos taurus GN=YPEL2 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.127e-12
Identity = 28/54 (51.85%), Postives = 40/54 (74.07%), Query Frame = 2 
Query:  227 VNIMLGPQEERLMLSGMHTVEDIFCCCCGQIVGWKYVAAHDKNQKYKEGKFVLE 388
            VN+  GP EER++L+G+H V DI+C  C   +GWKY  A + +QKYKEGK+++E
Sbjct:   55 VNVGCGPAEERVLLTGLHAVADIYCENCKTTLGWKYEHAFESSQKYKEGKYIIE 108

HSP 2 Score: 22.3274 bits (46), Expect = 3.127e-12
Identity = 8/18 (44.44%), Postives = 11/18 (61.11%), Query Frame = 1 
Query:  169 YKCRFCNSHLALADSVLS 222
            Y C  C +HLA  D ++S
Sbjct:   21 YSCIHCRAHLANHDELIS 38
[Close]
BLAST of FC873784 vs. ExPASy Swiss-Prot
Match: YPEL3_MOUSE (Protein yippee-like 3 OS=Mus musculus GN=Ypel3 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.062e-12
Identity = 28/54 (51.85%), Postives = 39/54 (72.22%), Query Frame = 2 
Query:  227 VNIMLGPQEERLMLSGMHTVEDIFCCCCGQIVGWKYVAAHDKNQKYKEGKFVLE 388
            VN+  GP EER++L+G+H V DI C  C   +GWKY  A + +QKYKEGK+++E
Sbjct:   55 VNVGCGPAEERVLLTGLHAVADIHCENCKTTLGWKYEQAFESSQKYKEGKYIIE 108

HSP 2 Score: 23.0978 bits (48), Expect = 4.062e-12
Identity = 8/18 (44.44%), Postives = 11/18 (61.11%), Query Frame = 1 
Query:  169 YKCRFCNSHLALADSVLS 222
            Y C  C +HLA  D ++S
Sbjct:   21 YSCAHCRAHLANHDDLIS 38
[Close]
BLAST of FC873784 vs. ExPASy Swiss-Prot
Match: YPEL3_HUMAN (Protein yippee-like 3 OS=Homo sapiens GN=YPEL3 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.062e-12
Identity = 28/54 (51.85%), Postives = 39/54 (72.22%), Query Frame = 2 
Query:  227 VNIMLGPQEERLMLSGMHTVEDIFCCCCGQIVGWKYVAAHDKNQKYKEGKFVLE 388
            VN+  GP EER++L+G+H V DI C  C   +GWKY  A + +QKYKEGK+++E
Sbjct:   55 VNVGCGPAEERVLLTGLHAVADIHCENCKTTLGWKYEQAFESSQKYKEGKYIIE 108

HSP 2 Score: 23.0978 bits (48), Expect = 4.062e-12
Identity = 8/18 (44.44%), Postives = 11/18 (61.11%), Query Frame = 1 
Query:  169 YKCRFCNSHLALADSVLS 222
            Y C  C +HLA  D ++S
Sbjct:   21 YSCAHCRAHLANHDDLIS 38
[Close]
BLAST of FC873784 vs. ExPASy Swiss-Prot
Match: YPEL3_CERAE (Protein yippee-like 3 OS=Cercopithecus aethiops GN=YPEL3 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.062e-12
Identity = 28/54 (51.85%), Postives = 39/54 (72.22%), Query Frame = 2 
Query:  227 VNIMLGPQEERLMLSGMHTVEDIFCCCCGQIVGWKYVAAHDKNQKYKEGKFVLE 388
            VN+  GP EER++L+G+H V DI C  C   +GWKY  A + +QKYKEGK+++E
Sbjct:   55 VNVGCGPAEERVLLTGLHAVADIHCENCKTTLGWKYEQAFESSQKYKEGKYIIE 108

HSP 2 Score: 23.0978 bits (48), Expect = 4.062e-12
Identity = 8/18 (44.44%), Postives = 11/18 (61.11%), Query Frame = 1 
Query:  169 YKCRFCNSHLALADSVLS 222
            Y C  C +HLA  D ++S
Sbjct:   21 YSCAHCRAHLANHDDLIS 38
[Close]
BLAST of FC873784 vs. ExPASy Swiss-Prot
Match: YPEL3_BOVIN (Protein yippee-like 3 OS=Bos taurus GN=YPEL3 PE=3 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 4.062e-12
Identity = 28/54 (51.85%), Postives = 39/54 (72.22%), Query Frame = 2 
Query:  227 VNIMLGPQEERLMLSGMHTVEDIFCCCCGQIVGWKYVAAHDKNQKYKEGKFVLE 388
            VN+  GP EER++L+G+H V DI C  C   +GWKY  A + +QKYKEGK+++E
Sbjct:   55 VNVGCGPAEERVLLTGLHAVADIHCENCKTTLGWKYEQAFESSQKYKEGKYIIE 108

HSP 2 Score: 23.0978 bits (48), Expect = 4.062e-12
Identity = 8/18 (44.44%), Postives = 11/18 (61.11%), Query Frame = 1 
Query:  169 YKCRFCNSHLALADSVLS 222
            Y C  C +HLA  D ++S
Sbjct:   21 YSCAHCRAHLANHDDLIS 38
[Close]
BLAST of FC873784 vs. ExPASy Swiss-Prot
Match: YPL1_CAEEL (Protein yippee-like F37A8.5 OS=Caenorhabditis elegans GN=F37A8.5 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.327e-11
Identity = 29/54 (53.70%), Postives = 40/54 (74.07%), Query Frame = 2 
Query:  227 VNIMLGPQEERLMLSGMHTVEDIFCCCCGQIVGWKYVAAHDKNQKYKEGKFVLE 388
            VN+  GP EER++L+G+H V DI+C  C   +GWKY  A + +QKYKEGKF++E
Sbjct:   68 VNVGCGPAEERVLLTGLHAVADIYCEICKTTLGWKYEHAFESSQKYKEGKFIIE 121
[Close]
BLAST of FC873784 vs. ExPASy Swiss-Prot
Match: YIPP_DROME (Protein yippee OS=Drosophila melanogaster GN=Yippee PE=1 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 7.168e-11
Identity = 25/54 (46.30%), Postives = 36/54 (66.67%), Query Frame = 2 
Query:  227 VNIMLGPQEERLMLSGMHTVEDIFCCCCGQIVGWKYVAAHDKNQKYKEGKFVLE 388
            VN+     +ER+ML+G H V D+ C  CG  +GW Y  A +++QKYKEG+ +LE
Sbjct:   49 VNLTFSNIQERVMLTGRHMVRDVMCKNCGAKLGWMYEFATEESQKYKEGRVILE 102

HSP 2 Score: 27.7202 bits (60), Expect = 7.168e-11
Identity = 12/32 (37.50%), Postives = 18/32 (56.25%), Query Frame = 1 
Query:  127 MGRIFLVELKGRSYYKCRFCNSHLALADSVLS 222
            MGRIFL  L G   + C  C+++L     ++S
Sbjct:    1 MGRIFLEHLGGLKLFNCAQCHTNLTNRSQLIS 32
[Close]
BLAST of FC873784 vs. ExPASy Swiss-Prot
Match: YIPL5_ARATH (Protein yippee-like At4g27740 OS=Arabidopsis thaliana GN=At4g27740 PE=3 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 9.636e-11
Identity = 24/58 (41.38%), Postives = 41/58 (70.69%), Query Frame = 2 
Query:  227 VNIMLGPQEERLMLSGMHTVEDIFCCCCGQIVGWKYVAAHDKNQKYKEGKFVLERWRI 400
            +N+++GP+  R +++G + V D+ C  CG+ +GWKYV   D  Q+YKEG FV+E+ ++
Sbjct:   44 MNVVVGPKIGRKLITGSYVVADVMCSKCGETLGWKYVETFDLKQRYKEGMFVIEKLKL 101

HSP 2 Score: 21.557 bits (44), Expect = 9.636e-11
Identity = 8/18 (44.44%), Postives = 12/18 (66.67%), Query Frame = 1 
Query:  169 YKCRFCNSHLALADSVLS 222
            Y CR C + LAL + ++S
Sbjct:   10 YFCRNCENPLALGEDLIS 27
The following BLAST results are available for this feature:
BLAST of FC873784 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
YPEL2_HUMAN3.127e-1251.85Protein yippee-like 2 OS=Homo sapiens GN=YPEL2 PE=... [more]
YPEL2_CERAE3.127e-1251.85Protein yippee-like 2 OS=Cercopithecus aethiops GN... [more]
YPEL2_BOVIN3.127e-1251.85Protein yippee-like 2 OS=Bos taurus GN=YPEL2 PE=3 ... [more]
YPEL3_MOUSE4.062e-1251.85Protein yippee-like 3 OS=Mus musculus GN=Ypel3 PE=... [more]
YPEL3_HUMAN4.062e-1251.85Protein yippee-like 3 OS=Homo sapiens GN=YPEL3 PE=... [more]
YPEL3_CERAE4.062e-1251.85Protein yippee-like 3 OS=Cercopithecus aethiops GN... [more]
YPEL3_BOVIN4.062e-1251.85Protein yippee-like 3 OS=Bos taurus GN=YPEL3 PE=3 ... [more]
YPL1_CAEEL1.327e-1153.70Protein yippee-like F37A8.5 OS=Caenorhabditis eleg... [more]
YIPP_DROME7.168e-1146.30Protein yippee OS=Drosophila melanogaster GN=Yippe... [more]
YIPL5_ARATH9.636e-1141.38Protein yippee-like At4g27740 OS=Arabidopsis thali... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2AD12FM1 AbsDev Citrus clementina cDNA clone KN0AAI2AD12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873784 ID=FC873784; Name=FC873784; organism=Citrus clementina; type=EST; length=831bp
CTGGTGTCTTAACTTGTCAAGTTAACAGCAGAAAGTAGTCTAATTAGTTG
CGAAGGTGACGTTGTTGTGTTGTTGATAATATGACAGGTCAAACTTAATT
GTTTTTGCTTGCAAATTGCAATTCAAATGGGAAGGATTTTTCTGGTGGAG
CTGAAAGGCAGGTCTTATTACAAATGCAGATTCTGTAACAGCCATCTCGC
TCTTGCTGATAGTGTCCTTTCCTGGGGTGAATATAATGCTTGGACCTCAA
GAGGAGAGGTTGATGCTCTCTGGCATGCATACTGTGGAGGATATATTTTG
CTGCTGCTGCGGACAAATTGTTGGCTGGAAATACGTTGCTGCACACGACA
AAAACCAAAAATACAAAGAAGGGAAGTTTGTTCTTGAAAGATGGAGGATT
GTTGAAGAGGTCACAGAGGAACTTAGTCTCGAAACCCATACTCATTCAAA
TGAGGCAGAAACTCCTTAGGAACGTGAAGTTTAAATTAAATCTAAACCAT
AGTGGCAAGACAATAGACTGTTAAGGAGCCATTTACACAATTGTGGGAAC
GGTAGACGGCTGCTTTGTGTTTCTATTATGTGGACTTTTGGCCAAAATCT
TGTTTAGCACCGCATCGCCCTTGACCAACGTTTAGGGGGGCCATTGGCTC
ACGAAGTTGGCCGTGAATGGAGAATTATTTTGAGATATACAAGTGAAGTC
GTATATATGTAATTATTACCATGCTAATGTTTGGTTTCTTTTGCATAAAA
CTGCGTGATCAACTTTCACTACTTTAGGTGCTTCGCTGTGGCTAATTGCT
GGGAGGTTGAAGGGCGTATGCCTTAAATTTT
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