FC873790
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873790 vs. ExPASy Swiss-Prot
Match: RL40_LEITA (60S ribosomal protein L40 OS=Leishmania tarentolae GN=UB-EP52 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.331e-14 Identity = 32/52 (61.54%), Postives = 43/52 (82.69%), Query Frame = 2 Query: 275 IIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 430 ++EP+L+ALA+KYN +K +CR+CYARL RA NCRKK CGH + LR KKK++ Sbjct: 1 VMEPTLVALAKKYNWEKKVCRRCYARLPVRATNCRKKACGHCSNLRMKKKLR 52
BLAST of FC873790 vs. ExPASy Swiss-Prot
Match: RL40_LEIMA (60S ribosomal protein L40 OS=Leishmania major GN=UB-EP52 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.331e-14 Identity = 32/52 (61.54%), Postives = 43/52 (82.69%), Query Frame = 2 Query: 275 IIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 430 ++EP+L+ALA+KYN +K +CR+CYARL RA NCRKK CGH + LR KKK++ Sbjct: 1 VMEPTLVALAKKYNWEKKVCRRCYARLPVRATNCRKKACGHCSNLRMKKKLR 52
BLAST of FC873790 vs. ExPASy Swiss-Prot
Match: RL40_TRYBB (60S ribosomal protein L40 OS=Trypanosoma brucei brucei PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.424e-13 Identity = 32/52 (61.54%), Postives = 42/52 (80.77%), Query Frame = 2 Query: 275 IIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 430 ++EP+L ALA+KYN +K +CR+CYARL RA NCRKK CGH + LR KKK++ Sbjct: 1 VMEPTLEALAKKYNWEKKVCRRCYARLPVRATNCRKKGCGHCSNLRMKKKLR 52
BLAST of FC873790 vs. ExPASy Swiss-Prot
Match: RL40_TRYCR (60S ribosomal protein L40 OS=Trypanosoma cruzi GN=FUS1 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.166e-13 Identity = 32/52 (61.54%), Postives = 42/52 (80.77%), Query Frame = 2 Query: 275 IIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 430 ++EP+L ALA+KYN +K +CR+CYARL RA NCRKK CGH + LR KKK++ Sbjct: 1 VMEPTLEALAKKYNWEKKVCRRCYARLPVRASNCRKKACGHCSNLRMKKKLR 52
BLAST of FC873790 vs. ExPASy Swiss-Prot
Match: ANUB1_HUMAN (AN1-type zinc finger and ubiquitin domain-containing protein 1 OS=Homo sapiens GN=ANUBL1 PE=2 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 3.870e-11 Identity = 37/78 (47.44%), Postives = 51/78 (65.38%), Query Frame = 2 Query: 47 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGII 280 M++F++TLTG L V +T+ +VKAKI+ EGIP +Q LI+ +LE+ L DYNI + TL LVL +RGG I Sbjct: 28 MELFIETLTGTCFELRVSPFETVISVKAKIRRLEGIPICRQHLIWNNMELENDYCLNDYNISEGCTLKLVLAMRGGPI 105 The following BLAST results are available for this feature:
BLAST of FC873790 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 125
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873790 ID=FC873790; Name=FC873790; organism=Citrus clementina; type=EST; length=712bpback to top |