FC873791
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873791 vs. ExPASy Swiss-Prot
Match: RLA0_CHICK (60S acidic ribosomal protein P0 OS=Gallus gallus GN=RPLP0 PE=2 SV=1) HSP 1 Score: 249.21 bits (635), Expect = 2.270e-65 Identity = 125/230 (54.35%), Postives = 163/230 (70.87%), Query Frame = 1 Query: 1 RGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 690 RG +VVLMGKNTMM++ IR H E N A L+P ++GNVG +FTK DL A AR G +AP DV VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LI+ GDKVG+SEA LL L I PFS+GLV+Q V++NGS+Y+PEVLD++E+ L ++F V V ++ L I YPT+A+ PH VN YK V+AVA+ T+Y+FP A+KVK +LADPS F Sbjct: 48 RGKAVVLMGKNTMMRKAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCDVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHKRFLEGVRNVASVCLQIGYPTIASVPHSIVNGYKRVLAVAVETDYTFPLAEKVKAFLADPSAF 275
BLAST of FC873791 vs. ExPASy Swiss-Prot
Match: RLA0_DROME (60S acidic ribosomal protein P0 OS=Drosophila melanogaster GN=RpLP0 PE=1 SV=1) HSP 1 Score: 247.669 bits (631), Expect = 6.604e-65 Identity = 120/230 (52.17%), Postives = 161/230 (70.00%), Query Frame = 1 Query: 1 RGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 690 RG +VVLMGKNTMM++ IR H E N L+P ++GNVG +FTKGDL APAR G +AP+ V++P NTGL P +TSFFQ L+IPTKI+KGT+EII V +++ GDKVG+SEA LL L I PFSYGL+V VY++GS++SPE+LD+ +DL KF V+ + A+ L++ YPT+A+APH N +KN++A+A TE F +A +KEY+ DPSKF Sbjct: 48 RGLAVVLMGKNTMMRKAIRGHLEN--NPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARPGAIAPLHVIIPAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEATLLNMLNISPFSYGLIVNQVYDSGSIFSPEILDIKPEDLRAKFQQGVANLAAVCLSVGYPTIASAPHSIANGFKNLLAIAATTEVEFKEATTIKEYIKDPSKF 275
BLAST of FC873791 vs. ExPASy Swiss-Prot
Match: RLA0_CERCA (60S acidic ribosomal protein P0 OS=Ceratitis capitata GN=RpLP0 PE=3 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 1.471e-64 Identity = 120/230 (52.17%), Postives = 161/230 (70.00%), Query Frame = 1 Query: 1 RGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 690 RG VVLMGKNTMM++ IR H E N L+P ++GNVG +FTKGDL APAR G +AP+ V++P NTGL P +TSFFQ L+IPTKI+KGT+EII V +++ GDKVG+SEA LL L I PFSYGL + VY++GS++SPE+LD+ +DL KF + V+ + A++L I YPT+A+APH N +KN++A+A +TE F QA +KE++ DPSKF Sbjct: 48 RGLGVVLMGKNTMMRKAIRGHLEN--NAQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARAGAIAPLPVIIPAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEATLLNMLNISPFSYGLAITQVYDSGSIFSPEILDIKPEDLRAKFQAGVANLAAVSLQIGYPTIASAPHSIANGFKNLLAIAASTEVEFKQAATIKEFIKDPSKF 275
BLAST of FC873791 vs. ExPASy Swiss-Prot
Match: RLA0_DANRE (60S acidic ribosomal protein P0 OS=Danio rerio GN=rplp0 PE=2 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 1.922e-64 Identity = 126/233 (54.08%), Postives = 162/233 (69.53%), Query Frame = 1 Query: 1 RGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLG---IRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 690 RG +VVLMGKNTMM++ IR H E N A L+P ++GNVG +FTK DL A AR G +AP +V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LI+ GDKVG+SEA LL L I PFSYGL++Q VY+NGSVYSPEVLD++ED L ++F V + ++ L I YPTLA+ PH +N YK V+AV + T+Y+FP A+KVK YLADP+ F Sbjct: 48 RGKAVVLMGKNTMMRKAIRGHLEN--NPALERLLPHIRGNVGFVFTKEDLTEVRDLLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKPGDKVGASEATLLNMLNMLNISPFSYGLIIQQVYDNGSVYSPEVLDITEDALHKRFLKGVRNIASVCLQIGYPTLASIPHTIINGYKRVLAVTVETDYTFPLAEKVKAYLADPTAF 278
BLAST of FC873791 vs. ExPASy Swiss-Prot
Match: RLA0_HUMAN (60S acidic ribosomal protein P0 OS=Homo sapiens GN=RPLP0 PE=1 SV=1) HSP 1 Score: 244.202 bits (622), Expect = 7.302e-64 Identity = 121/230 (52.61%), Postives = 162/230 (70.43%), Query Frame = 1 Query: 1 RGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 690 RG +VVLMGKNTMM++ IR H E N A L+P ++GNVG +FTK DL A AR G +AP +V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LI+ GDKVG+SEA LL L I PFS+GLV+Q V++NGS+Y+PEVLD++E+ L +F V V ++ L I YPT+A+ PH +N YK V+A+++ T+Y+FP A+KVK +LADPS F Sbjct: 48 RGKAVVLMGKNTMMRKAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 275
BLAST of FC873791 vs. ExPASy Swiss-Prot
Match: RLA0_BOVIN (60S acidic ribosomal protein P0 OS=Bos taurus GN=RPLP0 PE=2 SV=3) HSP 1 Score: 244.202 bits (622), Expect = 7.302e-64 Identity = 121/230 (52.61%), Postives = 162/230 (70.43%), Query Frame = 1 Query: 1 RGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 690 RG +VVLMGKNTMM++ IR H E N A L+P ++GNVG +FTK DL A AR G +AP +V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LI+ GDKVG+SEA LL L I PFS+GLV+Q V++NGS+Y+PEVLD++E+ L +F V V ++ L I YPT+A+ PH +N YK V+A+++ T+Y+FP A+KVK +LADPS F Sbjct: 48 RGKAVVLMGKNTMMRKAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 275
BLAST of FC873791 vs. ExPASy Swiss-Prot
Match: RLA0_PIG (60S acidic ribosomal protein P0 OS=Sus scrofa GN=RPLP0 PE=2 SV=2) HSP 1 Score: 243.817 bits (621), Expect = 9.536e-64 Identity = 120/230 (52.17%), Postives = 162/230 (70.43%), Query Frame = 1 Query: 1 RGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 690 RG +VVLMGKNTMM++ IR H E N A L+P ++GNVG +FTK DL A AR G +AP +V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LI+ GDKVG+SEA LL L I PFS+GL++Q V++NGS+Y+PEVLD++E+ L +F V V ++ L I YPT+A+ PH +N YK V+A+++ T+Y+FP A+KVK +LADPS F Sbjct: 48 RGKAVVLMGKNTMMRKAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLIIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 275
BLAST of FC873791 vs. ExPASy Swiss-Prot
Match: RLA0_RAT (60S acidic ribosomal protein P0 OS=Rattus norvegicus GN=Rplp0 PE=1 SV=2) HSP 1 Score: 243.432 bits (620), Expect = 1.245e-63 Identity = 121/230 (52.61%), Postives = 161/230 (70.00%), Query Frame = 1 Query: 1 RGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 690 RG +VVLMGKNTMM++ IR H E N A L+P ++GNVG +FTK DL A AR G +AP +V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LI+ GDKVG+SEA LL L I PFS+GL++Q V++NGS+YSPEVLD++E L +F V V ++ L I YPT+A+ PH +N YK V+A+++ T+Y+FP A+KVK +LADPS F Sbjct: 48 RGKAVVLMGKNTMMRKAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLIIQQVFDNGSIYSPEVLDITEQALHTRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 275
BLAST of FC873791 vs. ExPASy Swiss-Prot
Match: RLA0_MOUSE (60S acidic ribosomal protein P0 OS=Mus musculus GN=Rplp0 PE=1 SV=3) HSP 1 Score: 242.276 bits (617), Expect = 2.775e-63 Identity = 120/230 (52.17%), Postives = 160/230 (69.57%), Query Frame = 1 Query: 1 RGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 690 RG +VVLMGKNTMM++ IR H E N A L+P ++GNVG +FTK DL A AR G +AP +V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LI+ GDKVG+SEA LL L I PFS+GL++Q V++NGS+Y+PEVLD++E L +F V V ++ L I YPT+A+ PH +N YK V+A+++ TEY+FP +KVK +LADPS F Sbjct: 48 RGKAVVLMGKNTMMRKAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLIIQQVFDNGSIYNPEVLDITEQALHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETEYTFPLTEKVKAFLADPSAF 275
BLAST of FC873791 vs. ExPASy Swiss-Prot
Match: RLA0L_HUMAN (60S acidic ribosomal protein P0-like OS=Homo sapiens PE=1 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 1.522e-61 Identity = 119/230 (51.74%), Postives = 157/230 (68.26%), Query Frame = 1 Query: 1 RGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLADPSKF 690 RG VVLMGKNTMM++ IR H E N A L+P + GNVG +FTK DL A AR G +AP +V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LI+ GDKVG+SEA LL L I PFS+GLV+Q V++NGS+Y+PEVLD +E+ L +F V V ++ L YPT+A+ PH +N YK V+A+++ T+Y+FP A+ VK +LADPS F Sbjct: 48 RGKVVVLMGKNTMMRKAIRGHLEN--NPALEKLLPHIWGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDKTEETLHSRFLEGVRNVASVCLQTGYPTVASVPHSIINGYKRVLALSVETDYTFPLAENVKAFLADPSAF 275 The following BLAST results are available for this feature:
BLAST of FC873791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873791 ID=FC873791; Name=FC873791; organism=Citrus clementina; type=EST; length=878bpback to top |