FC873799
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873799 vs. ExPASy Swiss-Prot
Match: KNOX3_MAIZE (Homeobox protein knotted-1-like 3 (Fragment) OS=Zea mays GN=KNOX3 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.497e-17 Identity = 36/67 (53.73%), Postives = 50/67 (74.63%), Query Frame = 1 Query: 19 DVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 219 ++R+E+ +KR+ KLP + L +WW+ H +WPYP+E +K L E TGL+ KQINNWFINQRKR+W Sbjct: 19 NLRKELCKKRKKDKLPKEARQKLLSWWELHYRWPYPSEMEKIALAESTGLEQKQINNWFINQRKRHW 85
BLAST of FC873799 vs. ExPASy Swiss-Prot
Match: KNOX8_MAIZE (Homeobox protein knotted-1-like 8 (Fragment) OS=Zea mays GN=KNOX8 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.955e-17 Identity = 36/66 (54.55%), Postives = 48/66 (72.73%), Query Frame = 1 Query: 22 VREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 219 +R+E ++++ GKLP + L +WW+ H KWPYP+E +K L E TGL KQINNWFINQRKR+W Sbjct: 17 LRQEFSKRKKKGKLPKEARQKLLHWWELHYKWPYPSETEKMALAETTGLDPKQINNWFINQRKRHW 82
BLAST of FC873799 vs. ExPASy Swiss-Prot
Match: KNOS8_ORYSJ (Homeobox protein knotted-1-like 8 OS=Oryza sativa subsp. japonica GN=OSH43 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.427e-17 Identity = 36/73 (49.32%), Postives = 49/73 (67.12%), Query Frame = 1 Query: 1 FKSSFEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 219 + S D+R+ ++ + GKLP + L +WW+ H KWPYP+E +K L + TGL KQINNWFINQRKR+W Sbjct: 216 YGGSLGDLRQVFSKRTKKGKLPKEARQKLLHWWELHYKWPYPSEMEKMTLAQTTGLDQKQINNWFINQRKRHW 288
BLAST of FC873799 vs. ExPASy Swiss-Prot
Match: KNOS7_ORYSJ (Homeobox protein knotted-1-like 7 OS=Oryza sativa subsp. japonica GN=OSH3 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.829e-15 Identity = 35/66 (53.03%), Postives = 47/66 (71.21%), Query Frame = 1 Query: 22 VREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 219 +R+E+ +KR+ GKLP + L WW+ H +WP P+E +K L E TGL+ KQINN FINQRKR+W Sbjct: 243 LRKELSKKRKKGKLPKEARQKLLTWWELHYRWPNPSEMEKIALAESTGLEQKQINNCFINQRKRHW 308
BLAST of FC873799 vs. ExPASy Swiss-Prot
Match: KNOS9_ORYSJ (Homeobox protein knotted-1-like 9 OS=Oryza sativa subsp. japonica GN=Os03g0772100 PE=2 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 5.323e-15 Identity = 35/74 (47.30%), Postives = 49/74 (66.22%), Query Frame = 1 Query: 1 FKSSFEDVREEILRKRRAGKLPGDTTSVLKNWWQQH-SKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 219 + S D+R+ ++ + GKLP + L +WW+ H KWPYP+E +K L + TGL KQI+NWFINQRKR+W Sbjct: 217 YGGSLGDLRQAFSKRTKKGKLPKEARLKLLHWWELHYDKWPYPSEVEKMTLAQTTGLDQKQISNWFINQRKRHW 290
BLAST of FC873799 vs. ExPASy Swiss-Prot
Match: KNOS5_ORYSJ (Putative homeobox protein knotted-1-like 5 OS=Oryza sativa subsp. japonica GN=Os03g0673500 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.952e-15 Identity = 33/60 (55.00%), Postives = 39/60 (65.00%), Query Frame = 1 Query: 40 RKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 219 +K G LP D L WW H +WPYP+E +KA L E TGL KQ+ NWFINQRKR+W Sbjct: 229 KKNSTGHLPRDARHKLLQWWHLHYRWPYPSEAEKAALAESTGLDKKQVTNWFINQRKRHW 288
BLAST of FC873799 vs. ExPASy Swiss-Prot
Match: HBX9_DICDI (Homeobox protein 9 OS=Dictyostelium discoideum GN=hbx9 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.498e-13 Identity = 30/60 (50.00%), Postives = 42/60 (70.00%), Query Frame = 1 Query: 34 ILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKR 213 I+++++ GKLPG+ TS+LK W +H+ PYPTE++K L T L QINNWF N R+R Sbjct: 557 IVKRKKRGKLPGEATSILKKWLFEHNMHPYPTEEEKVALANSTFLSFNQINNWFTNARRR 616
BLAST of FC873799 vs. ExPASy Swiss-Prot
Match: ME3L2_HUMAN (Putative homeobox protein Meis3-like 2 OS=Homo sapiens GN=MEIS3P2 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.570e-11 Identity = 29/66 (43.94%), Postives = 45/66 (68.18%), Query Frame = 1 Query: 16 EDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKR 213 ED+ +E R ++ G P T++++ W QH PYP+E+ K +LV++TGL + Q+NNWFIN R+R Sbjct: 237 EDLDQEPRRNKKRGIFPKVATNIMRAWLFQHLWHPYPSEEQKKQLVQDTGLTILQVNNWFINARRR 302
BLAST of FC873799 vs. ExPASy Swiss-Prot
Match: MEIS3_HUMAN (Homeobox protein Meis3 OS=Homo sapiens GN=MEIS3 PE=1 SV=3) HSP 1 Score: 68.1662 bits (165), Expect = 4.663e-11 Identity = 28/66 (42.42%), Postives = 44/66 (66.67%), Query Frame = 1 Query: 16 EDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKR 213 ED+ +E R ++ G P T++++ W QH PYP+E+ K +L ++TGL + Q+NNWFIN R+R Sbjct: 254 EDLDQERRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 319
BLAST of FC873799 vs. ExPASy Swiss-Prot
Match: ME3L1_HUMAN (Putative homeobox protein Meis3-like 1 OS=Homo sapiens GN=MEIS3P1 PE=5 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 4.663e-11 Identity = 28/66 (42.42%), Postives = 44/66 (66.67%), Query Frame = 1 Query: 16 EDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKR 213 ED+ +E R ++ G P T++++ W QH PYP+E+ K +L ++TGL + Q+NNWFIN R+R Sbjct: 153 EDLDQEPRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 218 The following BLAST results are available for this feature:
BLAST of FC873799 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873799 ID=FC873799; Name=FC873799; organism=Citrus clementina; type=EST; length=678bpback to top |