FC873805
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873805 vs. ExPASy Swiss-Prot
Match: UPL7_ARATH (E3 ubiquitin-protein ligase UPL7 OS=Arabidopsis thaliana GN=UPL7 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.421e-12 Identity = 51/159 (32.08%), Postives = 70/159 (44.03%), Query Frame = 2 Query: 2 GFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQGSFDLS 478 G + L++F HE + LL G + L + K+ GY+ S I E+M F P ++ +FVT R P G L P I + T+ A G + LPS TC N LKLP Y M +KL+YAI+ G F+LS Sbjct: 990 GLTDLISPAWLKLFNAHEFNQLLSGGNHDIDVDDLRRNTKYTGGYSDSSRTIKIFWEVMKGFEPSERCLLLKFVTSCSRAPLLGFKYLQPTFIIHKVSCDTSLWAAIGGQDV-----ERLPSASTCYNTLKLPTYKRASTMREKLLYAITSNAG-FELS 1142
BLAST of FC873805 vs. ExPASy Swiss-Prot
Match: WWP2_MOUSE (NEDD4-like E3 ubiquitin-protein ligase WWP2 OS=Mus musculus GN=Wwp2 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.774e-12 Identity = 53/164 (32.32%), Postives = 74/164 (45.12%), Query Frame = 2 Query: 2 GFNQVFDITSLQIFTPHELDHLLCGRREL----WEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDD------LPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQG 463 GFN+V + L+ F EL+ +LCG +E+ W+ A+ H YT S I +++ E +++ QFVTG RLP GG A L GP + D LP TC N L LPPY + E + +KL+YAI E +G Sbjct: 727 GFNEVAPLEWLRYFDEKELELMLCGMQEIDMSDWQKNAIYRH------YTKSSKQIQWFWQVVKEMDNEKRIRLLQFVTGTCRLPVGGFAEL------------------IGSNGPQKFCIDRVGKETWLPRSHTCFNRLDLPPYKSYEQLKEKLLYAIEETEG 866
BLAST of FC873805 vs. ExPASy Swiss-Prot
Match: WWP2_HUMAN (NEDD4-like E3 ubiquitin-protein ligase WWP2 OS=Homo sapiens GN=WWP2 PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 5.774e-12 Identity = 52/164 (31.71%), Postives = 74/164 (45.12%), Query Frame = 2 Query: 2 GFNQVFDITSLQIFTPHELDHLLCGRREL----WEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDD------LPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQG 463 GFN+V + L+ F EL+ +LCG +E+ W+ + + H YT S I +++ E +++ QFVTG RLP GG A L GP + D LP TC N L LPPY + E + +KL+YAI E +G Sbjct: 727 GFNEVAPLEWLRYFDEKELELMLCGMQEIDMSDWQKSTIYRH------YTKNSKQIQWFWQVVKEMDNEKRIRLLQFVTGTCRLPVGGFAEL------------------IGSNGPQKFCIDKVGKETWLPRSHTCFNRLDLPPYKSYEQLREKLLYAIEETEG 866
BLAST of FC873805 vs. ExPASy Swiss-Prot
Match: HUL5_YEAST (Probable E3 ubiquitin-protein ligase HUL5 OS=Saccharomyces cerevisiae GN=HUL5 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.540e-12 Identity = 49/149 (32.89%), Postives = 74/149 (49.66%), Query Frame = 2 Query: 32 LQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQGSFDLS 478 +++F EL L+ G R+ + L + ++ GY + IV+ E++ EF +++ F +FVT P+ P G L+PK I + GT LP+ TC N LKLP Y K I+ +KL+YAI+ G FDLS Sbjct: 780 MEMFNSIELQMLISGERDNIDLDDLKSNTEYG-GYKEEDQTIVDFWEVLNEFKFEEKLNFLKFVTSVPQAPLQGFKALDPKFGI-----------RNAGTEKYR-----LPTASTCVNLLKLPDYRNKTILREKLLYAINSG-ARFDLS 910
BLAST of FC873805 vs. ExPASy Swiss-Prot
Match: ITCH_MOUSE (E3 ubiquitin-protein ligase Itchy OS=Mus musculus GN=Itch PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 9.848e-12 Identity = 52/164 (31.71%), Postives = 74/164 (45.12%), Query Frame = 2 Query: 2 GFNQVFDITSLQIFTPHELDHLLCGRREL----WEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSE------SADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQG 463 GFN++ LQ F EL+ LLCG +E+ W+ A+ H YT S I+ + + E +++ QFVTG RLP GG A L GP + ++ LP TC N L LPPY + E + +KL++AI E +G Sbjct: 721 GFNEILPQQYLQYFDAKELEVLLCGMQEIDLNDWQRHAIYRH------YTRTSKQIMWFWQFVKEIDNEKRMRLLQFVTGTCRLPVGGFADL------------------MGSNGPQKFCIEKVGKENWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEETEG 860
BLAST of FC873805 vs. ExPASy Swiss-Prot
Match: HECD2_PONAB (Probable E3 ubiquitin-protein ligase HECTD2 OS=Pongo abelii GN=HECTD2 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.848e-12 Identity = 47/154 (30.52%), Postives = 76/154 (49.35%), Query Frame = 2 Query: 2 GFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQG 463 GF+ V +L + P E++ L+CG +L + AL ++D GY I +++ F D Q+ F TG+ R+P GG+A LN K++ +E++ + LP TC N L LPPY +K+ + +KL+ IS +G Sbjct: 639 GFHSVCASNALMLLRPEEVEILVCGSPDL-DMHALQRSTQYD-GYAKTDLTIKYFWDVVLGFPLDLQKKLLHFTTGSDRVPVGGMADLNFKIS------------------KNETSTNCLPVAHTCFNQLCLPPYKSKKDLKQKLIIGISNSEG 772
BLAST of FC873805 vs. ExPASy Swiss-Prot
Match: HECD2_HUMAN (Probable E3 ubiquitin-protein ligase HECTD2 OS=Homo sapiens GN=HECTD2 PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 9.848e-12 Identity = 47/154 (30.52%), Postives = 76/154 (49.35%), Query Frame = 2 Query: 2 GFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQG 463 GF+ V +L + P E++ L+CG +L + AL ++D GY I +++ F D Q+ F TG+ R+P GG+A LN K++ +E++ + LP TC N L LPPY +K+ + +KL+ IS +G Sbjct: 639 GFHSVCASNALMLLRPEEVEILVCGSPDL-DMHALQRSTQYD-GYAKTDLTIKYFWDVVLGFPLDLQKKLLHFTTGSDRVPVGGMADLNFKIS------------------KNETSTNCLPVAHTCFNQLCLPPYKSKKDLKQKLIIGISNSEG 772
BLAST of FC873805 vs. ExPASy Swiss-Prot
Match: UBE3B_HUMAN (Ubiquitin-protein ligase E3B OS=Homo sapiens GN=UBE3B PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.286e-11 Identity = 54/168 (32.14%), Postives = 77/168 (45.83%), Query Frame = 2 Query: 2 GFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMG-EFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTI----VRKHSSTAPNTASNGTG----PSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQGSFDLS 478 GF + +++F+ EL L+ G + L +H + G+ I+ L +I+ +FTPD++ F +FVT R P G A L P +I V T S G LP+ TC N LKLP YS K ++ +KL YAIS G F+LS Sbjct: 902 GFRSIIKPEWIRMFSTPELQRLISGDNAEIDLEDLKKHTVYYGGFHGSHRVIIWLWDILASDFTPDERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGFFTIRKREPGGRLPTSSTCFNLLKLPNYSKKSVLREKLRYAISMNTG-FELS 1068
BLAST of FC873805 vs. ExPASy Swiss-Prot
Match: HUL4_YEAST (Probable E3 ubiquitin-protein ligase HUL4 OS=Saccharomyces cerevisiae GN=HUL4 PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.680e-11 Identity = 47/157 (29.94%), Postives = 81/157 (51.59%), Query Frame = 2 Query: 2 GFNQVF-DITSLQIFTPHELDHLLCGRREL--WEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQG 463 GF +VF + S+++F EL+ L+CG E ++ +L K+ G++ S A+ EI+ + Q+ QFVT + R+P G++ + K++++ H S DDLP TC N + L YS+K+ + KL++AI+E +G Sbjct: 749 GFKRVFAECNSIKLFNSEELERLVCGDEEQTKFDFKSLRSVTKYVGGFSDDSRAVCWFWEIIESWDYPLQKKLLQFVTASDRIPATGISTIPFKISLLGSHDS-----------------DDLPLAHTCFNEICLWNYSSKKKLELKLLWAINESEG 888
BLAST of FC873805 vs. ExPASy Swiss-Prot
Match: WWP1_MOUSE (NEDD4-like E3 ubiquitin-protein ligase WWP1 OS=Mus musculus GN=Wwp1 PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.865e-11 Identity = 52/164 (31.71%), Postives = 72/164 (43.90%), Query Frame = 2 Query: 2 GFNQVFDITSLQIFTPHELDHLLCGRREL----WEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSE------SADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQG 463 GFN+V + LQ F EL+ +LCG +E+ W+ + H YT S I+ + + E + + QFVTG RLP GG A L GP + D LP TC N L LPPY + E + +KL++AI E +G Sbjct: 775 GFNEVVPLQWLQYFDEKELEVMLCGMQEVDLADWQRNTVYRH------YTRNSKQIIWFWQFVKETDNEVRMRLLQFVTGTCRLPLGGFAEL------------------MGSNGPQKFCIEKVGKDTWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEETEG 914 The following BLAST results are available for this feature:
BLAST of FC873805 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873805 ID=FC873805; Name=FC873805; organism=Citrus clementina; type=EST; length=816bpback to top |