FC873815
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873815 vs. ExPASy Swiss-Prot
Match: PSB7A_ARATH (Proteasome subunit beta type-7-A OS=Arabidopsis thaliana GN=PBB1 PE=1 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.737e-13 Identity = 58/184 (31.52%), Postives = 87/184 (47.28%), Query Frame = 1 Query: 217 QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLXGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASG 768 QK KA GTT + IFK+GV++ AD+RA+ G ++ ++ +KI + P + AG AAD + + + RLH R V A LL L+SY+G +S ++ G D TGP L+ + G ++GSGS A V ++ YK ++ I F D SG Sbjct: 27 QKGLKAPSFLKTGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLRLHRYQTGRDSRVITALTLLKKHLFSYQG-HVSAALVLGGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAESICSGIFNDLGSG 209
BLAST of FC873815 vs. ExPASy Swiss-Prot
Match: PSB10_RAT (Proteasome subunit beta type-10 OS=Rattus norvegicus GN=Psmb10 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.963e-13 Identity = 51/181 (28.18%), Postives = 83/181 (45.86%), Query Frame = 1 Query: 229 KATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLXGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGG 771 + L GTT +F++GV++ AD+RA+ ++ +S +KI I P + AG AAD + R K LH L+ R V +++L L+ Y+G + ++ G D GP LY V G ++GSG A +L+ ++ +M++ I D SGG Sbjct: 31 RVPLARKTGTTIAGLVFRDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCGAGVAADTEMTTRMAASKMELHALSTGREPRVATVTRILRQTLFRYQG-HVGASLIVGGVDLNGPQLYSVHPHGSYSRLPFTALGSGQDAAVALLEDRFQPNMTLEAAQELLVEAITAGILGDLGSGG 210
BLAST of FC873815 vs. ExPASy Swiss-Prot
Match: PSB10_MOUSE (Proteasome subunit beta type-10 OS=Mus musculus GN=Psmb10 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.870e-13 Identity = 52/178 (29.21%), Postives = 84/178 (47.19%), Query Frame = 1 Query: 244 HAK--GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLXGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGG 771 HA+ GTT +F++GV++ AD+RA+ ++ +S +KI I P + AG AAD + R K LH L+ R V +++L L+ Y+G + ++ G D GP LY V G ++GSG A +L+ ++ +M++ I D SGG Sbjct: 34 HARKTGTTIAGLVFRDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCGAGVAADTEMTTRMAASKMELHALSTGREPRVATVTRILRQTLFRYQG-HVGASLVVGGVDLNGPQLYEVHPHGSYSRLPFTALGSGQGAAVALLEDRFQPNMTLEAAQELLVEAITAGILSDLGSGG 210
BLAST of FC873815 vs. ExPASy Swiss-Prot
Match: PSB10_BOVIN (Proteasome subunit beta type-10 OS=Bos taurus GN=PSMB10 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.870e-13 Identity = 52/178 (29.21%), Postives = 83/178 (46.63%), Query Frame = 1 Query: 244 HAK--GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLXGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGG 771 HA+ GTT +F++GV++ AD+RA+ ++ + +KI I P + AG AAD + R LH L+ R V +++L L+ Y+G + ++ G D TGP LY V G ++GSG A VL+ ++ +M++ I D SGG Sbjct: 34 HARKTGTTIAGLVFQDGVILGADTRATNDSVVADKICEKIHFIAPKIYCCGAGVAADAEMTTRMAASNMELHALSTGRECRVATVTRMLRQTLFRYQGY-VGASLIVGGVDFTGPQLYSVHPHGSYSRLPFTALGSGQDAAIAVLEDRFQPNMTLEAAQELLVEAITAGILGDLGSGG 210
BLAST of FC873815 vs. ExPASy Swiss-Prot
Match: PSB7_SCHPO (Probable proteasome subunit beta type-7 OS=Schizosaccharomyces pombe GN=SPAC23D3.07 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.622e-13 Identity = 57/199 (28.64%), Postives = 94/199 (47.24%), Query Frame = 1 Query: 202 DFDEFQKDT----------KATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLXGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASG 768 DF+ +Q++ KAT + GTT + I K+ +++ AD+RA+ G I+ ++ KK+ I+P + AG AAD +F + LH L R+ V A +L L+ Y+G + ++ G+D GP L+ + + G ++GSGS A VL++ Y+ D+ I F D SG Sbjct: 11 DFEYYQRNLLLQEKGFPTPKAT---STGTTIVGVIAKDCIVLGADTRATAGPIIADKNCKKLHLISPNIWCAGAGTAADTEFVTSMISSNIELHSLYTNRKPRVVTALTMLKQHLFRYQG-HIGAYLVLGGYDCKGPHLFTIAAHGSSDKLPYVALGSGSLAAISVLETKYQPDLERHEAMELVKEAIEAGIFNDLGSG 205
BLAST of FC873815 vs. ExPASy Swiss-Prot
Match: PSB_STRCO (Proteasome subunit beta OS=Streptomyces coelicolor GN=prcB PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.245e-11 Identity = 52/179 (29.05%), Postives = 89/179 (49.72%), Query Frame = 1 Query: 253 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGM---GLSVGTMIAGWD-ETGPG-LYYVDSEGGRLXGTRF-SVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGG 771 GTT +A F GV++A D RA+MG I+ + ++K+ + Y +AG A + ++ E ++S+ G + L+ ++ S GM GL+V + AG+D + G G ++ D GGR F + GSGS +A G + ++ D++ +Y A D+A+GG Sbjct: 53 GTTIVAVTFPGGVVLAGDRRATMGNMIAQRDIEKVFPADEYSAVGIAGTAGLAVEMVKLFQLELEHFEKVEGAQLSLEGKANRLSTMIRSNLGMAMQGLAVVPLFAGYDVDRGRGRIFSYDVTGGRSEERHFATTGSGSVFARGAMKKLFRDDLTEEQATTLVVQALYDAADDDSATGG 231
BLAST of FC873815 vs. ExPASy Swiss-Prot
Match: PSB6_YEAST (Proteasome component PRE3 OS=Saccharomyces cerevisiae GN=PRE3 PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.626e-11 Identity = 49/175 (28.00%), Postives = 84/175 (48.00%), Query Frame = 1 Query: 253 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLXGTRFSV-GSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGV 774 GT+ +A FK+GV++ ADSR + G YI+++ K+ ++ + +G AAD Q + L+ + T AS + + Y + L+ G ++AG+D+ G Y GG + +++ GSGS + YG D ++ +MS + A D +SGGV Sbjct: 19 GTSIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDKIWCCRSGSAADTQAIADIVQYHLELYTSQYGTPSTETAAS-VFKELCYENKD-NLTAGIIVAGYDDKNKGEVYTIPLGGSVHKLPYAIAGSGSTFIYGYCDKNFRENMSKEETVDFIKHSLSQAIKWDGSSGGV 191 The following BLAST results are available for this feature:
BLAST of FC873815 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873815 ID=FC873815; Name=FC873815; organism=Citrus clementina; type=EST; length=800bpback to top |