FC873817
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAB1A_PIG (Ras-related protein Rab-1A OS=Sus scrofa GN=RAB1A PE=2 SV=3) HSP 1 Score: 317.005 bits (811), Expect = 7.688e-86 Identity = 155/201 (77.11%), Postives = 168/201 (83.58%), Query Frame = 1 Query: 142 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVNQKASCC 744 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRT+E DGKT+KLQIWDTAGQERFRTITSSYYRGAHGII+VYDVTDQ SFNNVKQWL EIDRYASENVNKLLVGNKCDLT KKVV Y TAK FAD +GIPF+ETSA ++ NVEQ+FM M A+IK RM A V+I+ PV Q C Sbjct: 4 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQGSFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKIQSTPVKQSGGGC 204
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAB1A_LYMST (Ras-related protein Rab-1A OS=Lymnaea stagnalis GN=RAB1A PE=2 SV=1) HSP 1 Score: 315.079 bits (806), Expect = 2.921e-85 Identity = 154/205 (75.12%), Postives = 175/205 (85.37%), Query Frame = 1 Query: 133 IAVMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVN-QKASCC 744 ++ MNP+YDYLFKLLLIGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRT+E DGKT+KLQIWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWL EIDRYASENVNKLLVGNK DLT KKVV + TAK +AD++GIPF+ETSA ++ NVEQAFM M A+IKNRM A ++++P PV+ K CC Sbjct: 1 MSTMNPDYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDFTTAKEYADQLGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPITAASDSKPSVKINSSTPVSANKGGCC 205
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAB1B_BOVIN (Ras-related protein Rab-1B OS=Bos taurus GN=RAB1B PE=2 SV=1) HSP 1 Score: 307.375 bits (786), Expect = 6.091e-83 Identity = 154/201 (76.62%), Postives = 167/201 (83.08%), Query Frame = 1 Query: 142 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVNQKASCC 744 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRT+E DGKT+KLQIWDTAGQERFRTITSSYYRGAHGII+VYDVTDQES+ NVKQWL EIDRYASENVNKLLVGNK DLT KKVV TAK FAD +GIPF+ETSA ++ NVEQAFM M A+IK RM A R P ++I PV Q C Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGER-PNLKIDSTPVKQAGGGC 200
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RABD1_ARATH (Ras-related protein RABD1 OS=Arabidopsis thaliana GN=RABD1 PE=1 SV=1) HSP 1 Score: 306.99 bits (785), Expect = 7.955e-83 Identity = 151/203 (74.38%), Postives = 174/203 (85.71%), Query Frame = 1 Query: 142 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNRMASQPAMN-NARPPTVQIKGQPVNQ-KASCC 744 M+ EYDYLFKLLLIGDS VGKSCLLLRFADD+Y+DSYISTIGVDFKIRT+EQDGKT+KLQIWDTAGQERFRTITSSYYRGAHGIIIVYD T+ ESFNNVKQWL+EIDRYA+E+V KLL+GNK D+ + KVVS ET +A ADE+GIPF+ETSA DS+NVEQAF+ + +IK +M SQ N + P TVQ+KGQP+ Q CC Sbjct: 1 MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQWLSEIDRYANESVCKLLIGNKNDMVESKVVSTETGRALADELGIPFLETSAKDSINVEQAFLTIAGEIKKKMGSQTNANKTSGPGTVQMKGQPIQQNNGGCC 203
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAB1B_RAT (Ras-related protein Rab-1B OS=Rattus norvegicus GN=Rab1b PE=1 SV=1) HSP 1 Score: 305.064 bits (780), Expect = 3.023e-82 Identity = 151/201 (75.12%), Postives = 167/201 (83.08%), Query Frame = 1 Query: 142 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVNQKASCC 744 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRT+E DGKT+KLQIWDTAGQERFRT+TSSYYRGAHGII+VYDVTDQES+ NVKQWL EIDRYASENVNKLLVGNK DLT KKVV TAK FAD +G+PF+ETSA ++ NVEQAFM M A+IK RM A R P ++I PV + C Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTVTSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGER-PNLKIDSTPVKSASGGC 200
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAB1B_PONAB (Ras-related protein Rab-1B OS=Pongo abelii GN=RAB1B PE=2 SV=1) HSP 1 Score: 305.064 bits (780), Expect = 3.023e-82 Identity = 153/201 (76.12%), Postives = 166/201 (82.59%), Query Frame = 1 Query: 142 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVNQKASCC 744 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRT+E DGKT+KLQIWDTAGQERFRTITSSYYRGAHGII+VYDVTDQES+ NVKQWL EIDRYASENVNKLLVGNK DLT KKVV TAK FAD +GIPF+ETSA ++ NVEQAFM M A+IK RM A R P ++I PV C Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGER-PNLKIDSTPVKPAGGGC 200
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAB1B_MOUSE (Ras-related protein Rab-1B OS=Mus musculus GN=Rab1b PE=1 SV=1) HSP 1 Score: 305.064 bits (780), Expect = 3.023e-82 Identity = 152/201 (75.62%), Postives = 167/201 (83.08%), Query Frame = 1 Query: 142 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVNQKASCC 744 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRT+E DGKT+KLQIWDTAGQERFRTITSSYYRGAHGII+VYDVTDQES+ NVKQWL EIDRYASENVNKLLVGNK DLT KKVV TAK FAD +G+PF+ETSA ++ NVEQAFM M A+IK RM A R P ++I PV + C Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGER-PNLKIDSTPVKPASGGC 200
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAB1B_HUMAN (Ras-related protein Rab-1B OS=Homo sapiens GN=RAB1B PE=1 SV=1) HSP 1 Score: 305.064 bits (780), Expect = 3.023e-82 Identity = 153/201 (76.12%), Postives = 166/201 (82.59%), Query Frame = 1 Query: 142 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVNQKASCC 744 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRT+E DGKT+KLQIWDTAGQERFRTITSSYYRGAHGII+VYDVTDQES+ NVKQWL EIDRYASENVNKLLVGNK DLT KKVV TAK FAD +GIPF+ETSA ++ NVEQAFM M A+IK RM A R P ++I PV C Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGER-PNLKIDSTPVKPAGGGC 200
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: YPT1_NEUCR (GTP-binding protein ypt1 OS=Neurospora crassa GN=ypt-1 PE=3 SV=1) HSP 1 Score: 304.679 bits (779), Expect = 3.948e-82 Identity = 151/203 (74.38%), Postives = 164/203 (80.79%), Query Frame = 1 Query: 142 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPV--NQKASCC 744 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRT+E DGKTVKLQIWDTAGQERFRTITSSYYRGAHGI +VYDVTD +SFNNVKQWL EIDRYA+E VNKLLVGNK D+TDKKVV Y AK FAD +GIPF+ETSA ++ NVEQAF+ M IK RM S A NN + G V N CC Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMTDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGSSIATNNTKASVNVSPGHGVSNNSSGGCC 203
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAB1B_PIG (Ras-related protein Rab-1B OS=Sus scrofa GN=RAB1B PE=2 SV=1) HSP 1 Score: 303.908 bits (777), Expect = 6.735e-82 Identity = 153/201 (76.12%), Postives = 166/201 (82.59%), Query Frame = 1 Query: 142 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVNQKASCC 744 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRT+E DGKT+KLQIWDTAGQER RTITSSYYRGAHGII+VYDVTDQES+ NVKQWL EIDRYASENVNKLLVGNK DLT KKVV TAK FAD +GIPF+ETSA ++ NVEQAFM M A+IK RM A R P ++I PV Q C Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERGRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGER-PNLKIDSTPVKQAGGGC 200 The following BLAST results are available for this feature:
BLAST of FC873817 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873817 ID=FC873817; Name=FC873817; organism=Citrus clementina; type=EST; length=801bpback to top |