FC873817
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAB15_RAT (Ras-related protein Rab-15 OS=Rattus norvegicus GN=Rab15 PE=2 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 4.871e-48 Identity = 86/166 (51.81%), Postives = 123/166 (74.10%), Query Frame = 1 Query: 142 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMT 639 M +YD LF+LLLIGDSGVGK+CLL RF D+ + S+ISTIGVDFK++T+E DG V++QIWDTAGQER++TIT YYR A GI +VYD++ + S+ ++ +W++++D YA E V K+L+GNK D K+ V E + A E G+ F ETSA ++N++++F +T Sbjct: 1 MAKQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLT 166
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAB15_HUMAN (Ras-related protein Rab-15 OS=Homo sapiens GN=RAB15 PE=1 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 4.871e-48 Identity = 86/166 (51.81%), Postives = 123/166 (74.10%), Query Frame = 1 Query: 142 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMT 639 M +YD LF+LLLIGDSGVGK+CLL RF D+ + S+ISTIGVDFK++T+E DG V++QIWDTAGQER++TIT YYR A GI +VYD++ + S+ ++ +W++++D YA E V K+L+GNK D K+ V E + A E G+ F ETSA ++N++++F +T Sbjct: 1 MAKQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLT 166
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAB3B_BOVIN (Ras-related protein Rab-3B OS=Bos taurus GN=RAB3B PE=2 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 6.362e-48 Identity = 84/170 (49.41%), Postives = 129/170 (75.88%), Query Frame = 1 Query: 154 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNRMA 663 +DY+FKLL+IG+S VGK+ L R+ADD++ +++ST+G+DFK++TV + K VKLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W +I Y+ +N +LVGNKCD+ +++VV E + A+++G F E SA ++++V QAF + I ++M+ Sbjct: 19 FDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVVPTEKGRLLAEQLGFDFFEASAKENISVRQAFERLVDAICDKMS 188
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAB26_HUMAN (Ras-related protein Rab-26 OS=Homo sapiens GN=RAB26 PE=1 SV=3) HSP 1 Score: 191.045 bits (484), Expect = 6.362e-48 Identity = 94/199 (47.24%), Postives = 138/199 (69.35%), Query Frame = 1 Query: 154 YDYLFKLLLIGDSGVGKSCLLLRFADDSYL-DSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNRMASQPAMNNAR-PPTVQIKGQPVNQKASCC 744 YD FK++L+GDSGVGK+CLL+RF D ++L ++IST+G+DF+ + ++ DG VKLQ+WDTAGQERFR++T +YYR AH ++++YDVT++ SF+N++ WL EI YA +V +L+GNK D ++VV E + A E G+PFMETSA +NV+ AF A+ ++K R P+ R V+ +G + ASCC Sbjct: 60 YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKVDSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKELKQRSMKAPSEPRFRLHDYVKREG----RGASCC 254
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAB15_BOVIN (Ras-related protein Rab-15 OS=Bos taurus GN=RAB15 PE=2 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 6.362e-48 Identity = 86/166 (51.81%), Postives = 123/166 (74.10%), Query Frame = 1 Query: 142 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMT 639 M +YD LF+LLLIGDSGVGK+CLL RF D+ + S+ISTIGVDFK++T+E DG V++QIWDTAGQER++TIT YYR A GI +VYD++ + S+ ++ +W++++D YA E V K+L+GNK D K+ V E + A E G+ F ETSA ++N++++F +T Sbjct: 1 MAKQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPEGVQKILIGNKADEEQKRQVGREQGQQLAREYGMDFYETSACTNLNIKESFTRLT 166
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAB26_BOVIN (Ras-related protein Rab-26 OS=Bos taurus GN=RAB26 PE=2 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 8.309e-48 Identity = 97/226 (42.92%), Postives = 147/226 (65.04%), Query Frame = 1 Query: 76 PGPISSWTGSILREPPQHLIAVMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYL-DSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKG--QPVNQKASCC 744 PGP + G +P + + YD FK++L+GDSGVGK+CLL+RF D ++L ++IST+G+DF+ + V+ DG VKLQIWDTAGQERFR++T +YYR AH ++++YDVT++ SF++++ WL EI +A ++V +L+GNK D ++ V E A+ A + G+PFMETSA +NV+ AF A+ ++K R P+ P Q+ + + ASCC Sbjct: 36 PGPEAPPNGP--PQPGRSSVGGGGDFYDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVVDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDSIQAWLTEIQEHAQDDVVLMLLGNKVDSAQERAVKREDAEKLAKDYGLPFMETSAKTGLNVDLAFTAIAKELKQRHTKAPS-----EPRFQLHDYIKREGRGASCC 254
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAB15_MOUSE (Ras-related protein Rab-15 OS=Mus musculus GN=Rab15 PE=1 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 1.085e-47 Identity = 85/166 (51.20%), Postives = 123/166 (74.10%), Query Frame = 1 Query: 142 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMT 639 M +YD LF+LLLIGDSGVGK+CLL RF D+ + S+ISTIGVDFK++T++ DG V++QIWDTAGQER++TIT YYR A GI +VYD++ + S+ ++ +W++++D YA E V K+L+GNK D K+ V E + A E G+ F ETSA ++N++++F +T Sbjct: 1 MAKQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIDVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLT 166
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RB11A_TOBAC (Ras-related protein Rab11A OS=Nicotiana tabacum GN=RAB11A PE=2 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.418e-47 Identity = 96/209 (45.93%), Postives = 137/209 (65.55%), Query Frame = 1 Query: 151 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADI-----KNRMASQPAMNNARPP----TVQIKGQPVNQKASCCST 750 EYDYLFK++LIGDSGVGKS +L RF + + STIGV+F RT++ +GKTVK QIWDTAGQER+R ITS+YYRGA G ++ YD+T +++F+NV++WL E+ + N+ +L GNK DL + VS + +A + G+ F+ETSA +++NV++AF + DI K +A+Q A + P T+ + N K CCST Sbjct: 8 EYDYLFKMVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLFYDITKRQTFDNVQRWLRELRDHRDSNIVIILAGNKSDLKHLRAVSEQDDQALVKKEGLSFLETSALEALNVDKAFQTILTDIYHIISKKALAAQEAAASTALPGQGTTINVSDNSANVKRGCCST 216
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RB11B_TOBAC (Ras-related protein Rab11B OS=Nicotiana tabacum GN=RAB11B PE=2 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 3.158e-47 Identity = 101/209 (48.33%), Postives = 135/209 (64.59%), Query Frame = 1 Query: 151 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVN---------QKASCCST 750 +YDYLFKL+LIGDSGVGKS LL RF+ + + STIGV+F R++ D K VK QIWDTAGQER+R ITS+YYRGA G ++VYD+T +F NV++WL E+ + +N+ +LVGNK DL + VS E AKAFA+ FMETSA +S+NVE AF + +I ++ + A+ P KGQ +N +K CCS+ Sbjct: 10 DYDYLFKLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVIMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTEI-YKVVCRKALEVGDDPAALPKGQTINVGKDDVSAVKKVGCCSS 217
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAA2A_ARATH (Ras-related protein RABA2a OS=Arabidopsis thaliana GN=RABA2A PE=2 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 4.124e-47 Identity = 96/209 (45.93%), Postives = 140/209 (66.99%), Query Frame = 1 Query: 151 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIK-GQPV--------NQKASCCST 750 EYDYLFK++LIGDSGVGKS LL RF + + STIGV+F RT++ +G+TVK QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV +WL E+ +A N+ +L+GNK DL + V+ E A+++A++ G+ F+ETSA +++NVE+AF + +++ ++ + ++ IK GQ + N K CCS+ Sbjct: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKKSISSDQTTANANIKEGQTIDVAATSESNAKKPCCSS 216 The following BLAST results are available for this feature:
BLAST of FC873817 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873817 ID=FC873817; Name=FC873817; organism=Citrus clementina; type=EST; length=801bpback to top |