FC873817
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RB11A_RAT (Ras-related protein Rab-11A OS=Rattus norvegicus GN=Rab11a PE=1 SV=3) HSP 1 Score: 186.808 bits (473), Expect = 1.200e-46 Identity = 101/213 (47.42%), Postives = 136/213 (63.85%), Query Frame = 1 Query: 151 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNRMASQPAMNNAR---------------PPTVQIKGQPVNQKASCC 744 EYDYLFK++LIGDSGVGKS LL RF + + STIGV+F R+++ DGKT+K QIWDTAGQER+R ITS+YYRGA G ++VYD+ ++ NV++WL E+ +A N+ +LVGNK DL + V + A+AFA++ G+ F+ETSA DS NVE AF + +I R+ SQ M++ R PPT + K K CC Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEI-YRIVSQKQMSDRRENDMSPSNNVVPIHVPPTTENK-----PKVQCC 213
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RB11A_RABIT (Ras-related protein Rab-11A OS=Oryctolagus cuniculus GN=RAB11A PE=2 SV=3) HSP 1 Score: 186.808 bits (473), Expect = 1.200e-46 Identity = 101/213 (47.42%), Postives = 136/213 (63.85%), Query Frame = 1 Query: 151 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNRMASQPAMNNAR---------------PPTVQIKGQPVNQKASCC 744 EYDYLFK++LIGDSGVGKS LL RF + + STIGV+F R+++ DGKT+K QIWDTAGQER+R ITS+YYRGA G ++VYD+ ++ NV++WL E+ +A N+ +LVGNK DL + V + A+AFA++ G+ F+ETSA DS NVE AF + +I R+ SQ M++ R PPT + K K CC Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEI-YRIVSQKQMSDRRENDMSPSNNVVPIHVPPTTENK-----PKVQCC 213
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RB11A_PONAB (Ras-related protein Rab-11A OS=Pongo abelii GN=RAB11A PE=2 SV=3) HSP 1 Score: 186.808 bits (473), Expect = 1.200e-46 Identity = 101/213 (47.42%), Postives = 136/213 (63.85%), Query Frame = 1 Query: 151 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNRMASQPAMNNAR---------------PPTVQIKGQPVNQKASCC 744 EYDYLFK++LIGDSGVGKS LL RF + + STIGV+F R+++ DGKT+K QIWDTAGQER+R ITS+YYRGA G ++VYD+ ++ NV++WL E+ +A N+ +LVGNK DL + V + A+AFA++ G+ F+ETSA DS NVE AF + +I R+ SQ M++ R PPT + K K CC Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEI-YRIVSQKQMSDRRENDMSPSNNVVPIHVPPTTENK-----PKVQCC 213
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RB11A_PIG (Ras-related protein Rab-11A OS=Sus scrofa GN=RAB11A PE=2 SV=3) HSP 1 Score: 186.808 bits (473), Expect = 1.200e-46 Identity = 101/213 (47.42%), Postives = 136/213 (63.85%), Query Frame = 1 Query: 151 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNRMASQPAMNNAR---------------PPTVQIKGQPVNQKASCC 744 EYDYLFK++LIGDSGVGKS LL RF + + STIGV+F R+++ DGKT+K QIWDTAGQER+R ITS+YYRGA G ++VYD+ ++ NV++WL E+ +A N+ +LVGNK DL + V + A+AFA++ G+ F+ETSA DS NVE AF + +I R+ SQ M++ R PPT + K K CC Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEI-YRIVSQKQMSDRRENDMSPSNNVVPIHVPPTTENK-----PKVQCC 213
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RB11A_MOUSE (Ras-related protein Rab-11A OS=Mus musculus GN=Rab11a PE=1 SV=3) HSP 1 Score: 186.808 bits (473), Expect = 1.200e-46 Identity = 101/213 (47.42%), Postives = 136/213 (63.85%), Query Frame = 1 Query: 151 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNRMASQPAMNNAR---------------PPTVQIKGQPVNQKASCC 744 EYDYLFK++LIGDSGVGKS LL RF + + STIGV+F R+++ DGKT+K QIWDTAGQER+R ITS+YYRGA G ++VYD+ ++ NV++WL E+ +A N+ +LVGNK DL + V + A+AFA++ G+ F+ETSA DS NVE AF + +I R+ SQ M++ R PPT + K K CC Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEI-YRIVSQKQMSDRRENDMSPSNNVVPIHVPPTTENK-----PKVQCC 213
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RB11A_HUMAN (Ras-related protein Rab-11A OS=Homo sapiens GN=RAB11A PE=1 SV=3) HSP 1 Score: 186.808 bits (473), Expect = 1.200e-46 Identity = 101/213 (47.42%), Postives = 136/213 (63.85%), Query Frame = 1 Query: 151 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNRMASQPAMNNAR---------------PPTVQIKGQPVNQKASCC 744 EYDYLFK++LIGDSGVGKS LL RF + + STIGV+F R+++ DGKT+K QIWDTAGQER+R ITS+YYRGA G ++VYD+ ++ NV++WL E+ +A N+ +LVGNK DL + V + A+AFA++ G+ F+ETSA DS NVE AF + +I R+ SQ M++ R PPT + K K CC Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEI-YRIVSQKQMSDRRENDMSPSNNVVPIHVPPTTENK-----PKVQCC 213
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RB11A_CANFA (Ras-related protein Rab-11A OS=Canis familiaris GN=RAB11A PE=2 SV=3) HSP 1 Score: 186.808 bits (473), Expect = 1.200e-46 Identity = 101/213 (47.42%), Postives = 136/213 (63.85%), Query Frame = 1 Query: 151 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNRMASQPAMNNAR---------------PPTVQIKGQPVNQKASCC 744 EYDYLFK++LIGDSGVGKS LL RF + + STIGV+F R+++ DGKT+K QIWDTAGQER+R ITS+YYRGA G ++VYD+ ++ NV++WL E+ +A N+ +LVGNK DL + V + A+AFA++ G+ F+ETSA DS NVE AF + +I R+ SQ M++ R PPT + K K CC Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEI-YRIVSQKQMSDRRENDMSPSNNVVPIHVPPTTENK-----PKVQCC 213
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RB11A_CHICK (Ras-related protein Rab-11A OS=Gallus gallus GN=RAB11A PE=2 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.567e-46 Identity = 101/213 (47.42%), Postives = 136/213 (63.85%), Query Frame = 1 Query: 151 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNRMASQPAMNNAR---------------PPTVQIKGQPVNQKASCC 744 EYDYLFK++LIGDSGVGKS LL RF + + STIGV+F R+++ DGKT+K QIWDTAGQER+R ITS+YYRGA G ++VYD+ ++ NV++WL E+ +A N+ +LVGNK DL + V + A+AFA++ G+ F+ETSA DS NVE AF + +I R+ SQ M++ R PPT + K K CC Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEI-YRIVSQKQMSDRRENDMSPSNNVVPIHVPPTTENK-----PKMQCC 213
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAB19_BOVIN (Ras-related protein Rab-19 OS=Bos taurus GN=RAB19 PE=2 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.567e-46 Identity = 88/195 (45.13%), Postives = 134/195 (68.72%), Query Frame = 1 Query: 142 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIG-IPFMETSAXDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPV 723 ++ +DYLFK++LIGDS VGK+C++ F Y+++ +TIGVDF +R +E DGK VK+Q+WDTAGQERFRTIT SYYR AH II YD+T + +F +V W++EI++Y + N+ +L+GNKCDL +K+ V +E A A++ G + +ETSA +S N+++ F+ M ++ R S P P ++ ++ PV Sbjct: 10 VDENFDYLFKIILIGDSNVGKTCVVQHFKSGVYMEAQQNTIGVDFTVRALEIDGKKVKMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNKCDLWEKRHVLFEDACILAEKYGLLAVLETSAKESKNIDEVFVLMARELMAR-HSLPLYGEGAPGSLPLESTPV 203
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAA2C_ARATH (Ras-related protein RABA2c OS=Arabidopsis thaliana GN=RABA2C PE=2 SV=4) HSP 1 Score: 186.037 bits (471), Expect = 2.047e-46 Identity = 96/213 (45.07%), Postives = 142/213 (66.67%), Query Frame = 1 Query: 142 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADI-----KNRMASQ--PAMNNARP---PTVQIKGQPVNQKASCCST 750 ++ EYDYLFK++LIGDSGVGKS +L RF + + STIGV+F RT + +GKT+K QIWDTAGQER+R ITS+YYRGA G ++VYD+T +++F+NV +WL E+ +A N+ ++ GNK DL + V+ E ++ A++ G+ F+ETSA ++ NVE+AF + +I K +A+Q A N+A P T+ + K +CCS+ Sbjct: 5 VDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKKALAAQEAAAANSAIPGQGTTINVDDTSGGAKRACCSS 217 The following BLAST results are available for this feature:
BLAST of FC873817 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873817 ID=FC873817; Name=FC873817; organism=Citrus clementina; type=EST; length=801bpback to top |