FC873817
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: YPT3_SCHPO (GTP-binding protein ypt3 OS=Schizosaccharomyces pombe GN=ypt3 PE=1 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 4.559e-46 Identity = 93/166 (56.02%), Postives = 118/166 (71.08%), Query Frame = 1 Query: 151 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADI 648 EYDYLFK +LIGDSGVGKS LL+RF + + STIGV+F R + D K +K QIWDTAGQER+R ITS+YYRGA G +IVYD+T Q SF+NV +WL E+ +A N+ +LVGNK DL + VS E A+AFA E + F+ETSA D+ NVE+AF + +I Sbjct: 6 EYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEI 171
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RGP2_ORYSJ (Ras-related protein RGP2 OS=Oryza sativa subsp. japonica GN=RGP2 PE=2 SV=2) HSP 1 Score: 184.496 bits (467), Expect = 5.955e-46 Identity = 93/209 (44.50%), Postives = 140/209 (66.99%), Query Frame = 1 Query: 151 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADI-----KNRMASQPAMNNARP-----PTVQIKGQPVNQKASCCS 747 EY YLFK++LIGDSGVGKS +L RF + + STIGV+F ++++ +GKT+K QIWDTAGQER+R ITS+YYRGA G ++VYD+T ++SF+NV +WL E+ +A ++ ++VGNK DL + VS + KA A++ G+ F+ETSA +++NVE+AF + ++ + +A++ A + P T+ I N K +CCS Sbjct: 8 EYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMMVGNKSDLIHLRAVSEDEGKALAEKEGLFFLETSAMEAVNVEEAFQTIITEVYGIVNRKALAAKEAAAASAPLPSQGKTISIDSAAGNTKRACCS 216
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RB11A_BOVIN (Ras-related protein Rab-11A OS=Bos taurus GN=RAB11A PE=2 SV=3) HSP 1 Score: 184.496 bits (467), Expect = 5.955e-46 Identity = 100/213 (46.95%), Postives = 135/213 (63.38%), Query Frame = 1 Query: 151 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNRMASQPAMNNAR---------------PPTVQIKGQPVNQKASCC 744 EYDYLFK++LIGDSGVGKS LL RF + + STIGV+F R+++ DGKT+K QIWDTAGQER+R ITS+YYRGA G ++VYD+ ++ NV++WL E+ +A N+ +LVGNK DL + V + A+AFA++ G+ F+ETSA D NVE AF + +I R+ SQ M++ R PPT + K K CC Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDYTNVEAAFQTILTEI-YRIVSQKQMSDRRENDMSPSNNVVPIHVPPTTENK-----PKVQCC 213
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAA1A_ARATH (Ras-related protein RABA1a OS=Arabidopsis thaliana GN=RABA1A PE=2 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 5.955e-46 Identity = 96/207 (46.38%), Postives = 127/207 (61.35%), Query Frame = 1 Query: 151 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVN--------QKASCCS 747 EYDYLFKL+LIGDSGVGKS LL RF + + STIGV+F +T + +GK VK QIWDTAGQER+R ITS+YYRGA G +++YDVT +F N +WL E+ + N+ +L+GNKCDL V E AKAFA+ + FMETSA D+ NVE AF + I ++ + + KG+ +N ++ CCS Sbjct: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSKRSVDGGGESADLPGKGETINVKEDGSVLKRMGCCS 215
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: YPTC4_CHLRE (GTP-binding protein YPTC4 OS=Chlamydomonas reinhardtii GN=YPTC4 PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 1.016e-45 Identity = 94/211 (44.55%), Postives = 133/211 (63.03%), Query Frame = 1 Query: 154 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNRMASQP--------------AMNNARPPTVQIKGQPVNQKASCC 744 Y YLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + DGK +KLQIWDTAGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL + ++A+ N+ +L+GNKCDLT ++ V+ E + FA E G+ F+ETSA + NVE+AF+ +I ++ NA P TV+ + +SCC Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSNESYGIKVGYGGGNAGPQTVKPGEGGAAKSSSCC 213
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAB2A_MAIZE (Ras-related protein Rab-2-A OS=Zea mays GN=RAB2A PE=2 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.327e-45 Identity = 87/169 (51.48%), Postives = 120/169 (71.01%), Query Frame = 1 Query: 154 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNRM 660 Y YLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + D K +KLQIWDTAGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL + ++A+ N+ +LVGNKCDL+ ++ VSYE + FA E G+ FME SA + NVE+AF+ I ++ Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNKCDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKI 171
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: YPTV4_VOLCA (GTP-binding protein yptV4 OS=Volvox carteri GN=YPTV4 PE=3 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.733e-45 Identity = 86/169 (50.89%), Postives = 122/169 (72.19%), Query Frame = 1 Query: 154 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNRM 660 Y YLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + DGK +KLQIWDTAGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL + ++A+ N+ +L+GNKCDLT ++ V+ E + FA E G+ F+ETSA + NVE+AF+ +I ++ Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKI 171
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAB2B_MAIZE (Ras-related protein Rab-2-B OS=Zea mays GN=RAB2B PE=2 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.733e-45 Identity = 87/169 (51.48%), Postives = 120/169 (71.01%), Query Frame = 1 Query: 154 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNRM 660 Y YLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + D K +KLQIWDTAGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL + ++A+ N+ +LVGNKCDL+ ++ VSYE + FA E G+ FME SA + NVE+AF+ I ++ Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNKCDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKI 171
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: YPTC6_CHLRE (Ras-related protein YPTC6 OS=Chlamydomonas reinhardtii GN=YPTC6 PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 2.263e-45 Identity = 96/210 (45.71%), Postives = 136/210 (64.76%), Query Frame = 1 Query: 151 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPV-----------NQKASCCS 747 +YDYLFK++LIGDSGVGKS LL RF + + STIGV+F R+++ DGKT+K QIWDTAGQER+R ITS+YYRGA G ++VYD+T +F NV++WL E+ +A N+ +LVGNK DL + V E A+AF + G+ F+ETSA +S NVE+AF + +I + ++ + + P + +G+ V +K CCS Sbjct: 8 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADSNIVIMLVGNKSDLKHLRDVQTEVAQAFCEREGLSFIETSALESTNVEKAFQQILTEIYHIVSKKVLDSEDNRPKIG-EGRDVIVIDNAHDDGGKKKGGCCS 216
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAB43_HUMAN (Ras-related protein Rab-43 OS=Homo sapiens GN=RAB43 PE=1 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 5.041e-45 Identity = 89/198 (44.95%), Postives = 133/198 (67.17%), Query Frame = 1 Query: 151 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGI-PFMETSAXDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVNQKASC 741 +YD+LFKL+L+GD+ VGK+C++ RF ++ + STIGVDF ++T+E GK VKLQIWDTAGQERFRTIT SYYR A+G I+ YD+T + SF +V W+ ++ +YA N+ +LL+GNK DL++ + VS A++ A+ I +ETSA DS NVE+AF+ + ++ R P + P +Q+ + + + C Sbjct: 14 QYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLSELREVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATELIMRHGG-PLFSEKSPDHIQLNSKDIGEGWGC 210 The following BLAST results are available for this feature:
BLAST of FC873817 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873817 ID=FC873817; Name=FC873817; organism=Citrus clementina; type=EST; length=801bpback to top |