FC873817
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAP2B_HUMAN (Ras-related protein Rap-2b OS=Homo sapiens GN=RAP2B PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 7.568e-25 Identity = 67/172 (38.95%), Postives = 103/172 (59.88%), Query Frame = 1 Query: 166 FKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYAS-ENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNRM--ASQP 672 +K++++G GVGKS L ++F S+++ Y TI DF + +E D L+I DTAG E+F ++ Y + G I+VY + +Q+SF ++K ++I R E V +LVGNK DL ++ VSY KA A+E PFMETSA + +V++ F A+I +M A+QP Sbjct: 4 YKVVVLGSGGVGKSALTVQFVTGSFIEKYDPTIE-DFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYERVPMILVGNKVDLEGEREVSYGEGKALAEEWSCPFMETSAKNKASVDELF----AEIVRQMNYAAQP 170
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAP2A_PIG (Ras-related protein Rap-2a OS=Sus scrofa GN=RAP2A PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 7.568e-25 Identity = 67/172 (38.95%), Postives = 103/172 (59.88%), Query Frame = 1 Query: 166 FKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYAS-ENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNRM--ASQP 672 +K++++G GVGKS L ++F S+++ Y TI DF + +E D L+I DTAG E+F ++ Y + G I+VY + +Q+SF ++K ++I R E V +LVGNK DL ++ VSY KA A+E PFMETSA + +V++ F A+I +M A+QP Sbjct: 4 YKVVVLGSGGVGKSALTVQFVTGSFIEKYDPTIE-DFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYERVPMILVGNKVDLEGEREVSYGEGKALAEEWSCPFMETSAKNKASVDELF----AEIVRQMNYAAQP 170
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAB32_MOUSE (Ras-related protein Rab-32 OS=Mus musculus GN=Rab32 PE=2 SV=3) HSP 1 Score: 114.39 bits (285), Expect = 7.568e-25 Identity = 67/206 (32.52%), Postives = 115/206 (55.83%), Query Frame = 1 Query: 157 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKT-VKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYA----SENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIP-FMETSAXDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIK--GQPVNQK--ASCC 744 ++LFK+L+IG+ GVGK+ ++ R+ + Y +TIGVDF ++ + D +T V+LQ+WD AGQERF +T YY+ A G +V+D++ +F+ V +W N++D + +L+ NKCD S F + G + ETSA D++N+++A + ++N +A+Q + + +IK +P K + CC Sbjct: 21 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYKEALGAFVVFDISRSSTFDAVLKWKNDLDSKVHLPNGSPIPAVLLANKCDQKKDNSQSPSQMDQFCKDHGFTGWFETSAKDNINIDEATRFL---VENMLANQQSFPSEEIDLDRIKLVEEPPTTKPRSQCC 223
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAB34_HUMAN (Ras-related protein Rab-34 OS=Homo sapiens GN=RAB34 PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.686e-24 Identity = 63/161 (39.13%), Postives = 95/161 (59.01%), Query Frame = 1 Query: 169 KLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWL-NEIDRYASENVNKLLVGNKCDLTD--KKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTA 642 K++++GD VGK+CL+ RF D++ +Y +TIGVDF++ E G LQ+WDTAGQERF+ I S+YYRGA IIIV+++ D S + KQWL + + +V LVG+K DL+ + + + A A E+ + S+ NV + F + A Sbjct: 54 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTPAQYALMEKDALQVAQEMKAEYWAVSSLTGENVREFFFRVAA 214
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAB32_HUMAN (Ras-related protein Rab-32 OS=Homo sapiens GN=RAB32 PE=1 SV=3) HSP 1 Score: 113.235 bits (282), Expect = 1.686e-24 Identity = 63/182 (34.62%), Postives = 100/182 (54.95%), Query Frame = 1 Query: 157 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKT-VKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYA----SENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIP-FMETSAXDSMNVEQAFMAMTADIKNRMASQPAMNN 684 ++LFK+L+IG+ GVGK+ ++ R+ + Y +TIGVDF ++ + D +T V+LQ+WD AGQERF +T YY+ A G +V+D++ +F V +W +++D + +L+ NKCD S F E G + ETSA D++N+E+A + I S P N Sbjct: 23 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQSFPNEEN 204
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAS1_CANAL (Ras-like protein 1 OS=Candida albicans GN=RAS1 PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.202e-24 Identity = 60/162 (37.04%), Postives = 92/162 (56.79%), Query Frame = 1 Query: 166 FKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYA-SENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADI 648 +KL+++G GVGKS L ++ ++D Y TI ++ + D + V L + DTAGQE + + Y R G ++VY + SF + + ++I R S+NV L+VGNKCDL ++ VSYE A A+ PF+ETSA +NVE+AF + +I Sbjct: 5 YKLVVVGGGGVGKSALTIQLIQSHFVDEYDPTIEDSYR-KQCTIDDQQVLLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSINSLNSFQELNSFYDQILRVKDSDNVPVLVVGNKCDLEMERQVSYEDGLALANSFNCPFLETSAKQRINVEEAFYGLVRNI 165
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RYL2_YARLI (Ras-like GTP-binding protein RYL2 OS=Yarrowia lipolytica GN=RYL2 PE=3 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 2.876e-24 Identity = 72/203 (35.47%), Postives = 107/203 (52.71%), Query Frame = 1 Query: 169 KLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLT----DKKVVSYETAKAFADE---IGIPFMETSAXDSMNVEQAF-MAMTADIKNRMASQPAMNNA---RPPTVQIKGQPVNQKASCC 744 K++L+G GVGK+C + R+ ++ + STIG F + V + TV+LQIWDTAGQERFR++ YYR A I+ YDVT + SF+ + WL E+ + S ++ +VG K DL + V +E +A E E SA D VE+ F + +T + R A + +N+ R V + QK+SCC Sbjct: 7 KIVLLGAQGVGKTCFVTRYVNNKFQAGQASTIGASFSRKRVVVNDTTVRLQIWDTAGQERFRSMAPIYYRSASCGILCYDVTSRASFDAMHLWLLELKQNLSSDIIIHIVGTKVDLVKDEPSLREVPFEQCVEYASEWLQDDSCCHEISAKDDEGVEEVFEVIITKLLDKREADEQQKHNSQRQRQSVVYLHTDEDEQKSSCC 209
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: YPT52_YEAST (GTP-binding protein YPT52 OS=Saccharomyces cerevisiae GN=YPT52 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.756e-24 Identity = 69/231 (29.87%), Postives = 115/231 (49.78%), Query Frame = 1 Query: 166 FKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVE---QDGK-----TVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEI-DRYASENVNKLLVGNKCDLTDK--------------------KVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAM--------TADIKNRMASQPAMNNARPPTVQIKGQPVNQKASCCS 747 FKL+L+GDS VGKS ++ RF D++ + STIG F +++ DG +K +IWDTAGQER++++ YYR A+ ++VYD+T ++S + W++E+ ++ +++ L+GNK DL + + +S E AK +A E G+ F E SA V++ F + +I ++ Q N + ++ N SCCS Sbjct: 4 FKLVLLGDSSVGKSSIVHRFVKDTFDELRESTIGAAFLSQSITIHPNDGNETKDVVIKFEIWDTAGQERYKSLAPMYYRNANAALVVYDITQEDSLQKARNWVDELKNKVGDDDLVIYLLGNKVDLCQETPSTETSPDSNEGGDEEQKVRAISTEEAKQYAQEQGLLFREVSAKTGEGVKEIFQDIGEKLYDLKKDEILSKQNRQIGGGNNGQVDINLQRPSTNDPTSCCS 234
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RASK_RAT (GTPase KRas OS=Rattus norvegicus GN=Kras PE=1 SV=3) HSP 1 Score: 111.309 bits (277), Expect = 6.407e-24 Identity = 64/183 (34.97%), Postives = 100/183 (54.64%), Query Frame = 1 Query: 166 FKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYA-SENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIK 711 +KL+++G GVGKS L ++ + ++D Y TI ++ + V DG+T L I DTAGQE + + Y R G + V+ + + +SF ++ + +I R SE+V +LVGNKCDL + V + A+ A GIPF+ETSA VE AF + +I+ + + P V+IK Sbjct: 4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDL-PSRTVDTKQAQELARSYGIPFIETSAKTRQRVEDAFYTLVREIRQYRLKKISKEEKTPGCVKIK 184
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RASK_MOUSE (GTPase KRas OS=Mus musculus GN=Kras PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 6.407e-24 Identity = 64/183 (34.97%), Postives = 100/183 (54.64%), Query Frame = 1 Query: 166 FKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYA-SENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIK 711 +KL+++G GVGKS L ++ + ++D Y TI ++ + V DG+T L I DTAGQE + + Y R G + V+ + + +SF ++ + +I R SE+V +LVGNKCDL + V + A+ A GIPF+ETSA VE AF + +I+ + + P V+IK Sbjct: 4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDL-PSRTVDTKQAQELARSYGIPFIETSAKTRQRVEDAFYTLVREIRQYRLKKISKEEKTPGCVKIK 184 The following BLAST results are available for this feature:
BLAST of FC873817 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873817 ID=FC873817; Name=FC873817; organism=Citrus clementina; type=EST; length=801bpback to top |