FC873817

Overview
NameFC873817
Unique NameFC873817
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length801
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAS_BOTFU (Ras-like protein OS=Botryotinia fuckeliana GN=ras1 PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.180e-23
Identity = 63/202 (31.19%), Postives = 103/202 (50.99%), Query Frame = 1
Query:  166 FKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLV-GNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIK---NRMASQPA-----MNNARPPTVQIKGQPVNQKASCC 744
            +KL+++G  GVGKSCL ++     ++D Y  TI   ++ + V  D +   L + DTAGQE +  +   Y R   G ++VY +T ++SF  +  +  +I R   ++   ++V GNKCDL  ++ VS +  +  AD+ G  F+ETSA   +NV+ AF  +  +I+     MA   A      NN  P       +   +   CC
Sbjct:    9 YKLVVVGGGGVGKSCLTIQLIQSHFVDEYDPTIEDSYRKQCVI-DEEVALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSITSRQSFEEIMTFQQQILRVKDKDYFPIIVVGNKCDLEGERQVSKQEGQQLADDFGCKFIETSAKSRINVDNAFYDIVREIRRYNKEMAGYTAGGASGANNGGPQGKMEVSEGEKESGCCC 209          
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAS1_DROPS (Ras-like protein 1 OS=Drosophila pseudoobscura pseudoobscura GN=Ras85D PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.180e-23
Identity = 61/163 (37.42%), Postives = 95/163 (58.28%), Query Frame = 1
Query:  166 FKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYA-SENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIK 651
            +KL+++G  GVGKS L ++   + ++D Y  TI   ++ + V  DG+T  L I DTAGQE +  +   Y R   G ++V+ V   +SF ++  +  +I R   +E V  +LVGNKCDLT   V + E A+  A + GIP++ETSA   M V+ AF  +  +I+
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGTYREQIKRVKDAEEVPMVLVGNKCDLTTWNVKN-EQAREVAKQYGIPYIETSAKTRMGVDDAFYTLVREIR 164          
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAS1_DROPE (Ras-like protein 1 OS=Drosophila persimilis GN=Ras85D PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.180e-23
Identity = 61/163 (37.42%), Postives = 95/163 (58.28%), Query Frame = 1
Query:  166 FKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYA-SENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIK 651
            +KL+++G  GVGKS L ++   + ++D Y  TI   ++ + V  DG+T  L I DTAGQE +  +   Y R   G ++V+ V   +SF ++  +  +I R   +E V  +LVGNKCDLT   V + E A+  A + GIP++ETSA   M V+ AF  +  +I+
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGTYREQIKRVKDAEEVPMVLVGNKCDLTTWNVKN-EQAREVAKQYGIPYIETSAKTRMGVDDAFYTLVREIR 164          
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAB7B_DICDI (Ras-related protein Rab-7B OS=Dictyostelium discoideum GN=rab7B PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.180e-23
Identity = 67/200 (33.50%), Postives = 114/200 (57.00%), Query Frame = 1
Query:  163 LFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNE-IDRYASEN---VNKLLVGNKCDLTDKKVVSYETAKAFADEIG--IPFMETSAXDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVNQKASCC 744
            + K+++IG+  VGK+ +L R+ D  ++ +   TIGVDF    V      V LQ+WDT+GQERFR++  SYYRGA   I+V+DVT++++  ++K W ++ I++    +      +++GNK D  ++ V      +   D IG  + + +TSA D++N+EQ F      I N+  +QP  N   P  +    +  + ++SCC
Sbjct:    7 IIKVVIIGEKSVGKTSILRRYVDKRFV-TLKPTIGVDF----VMVSENMVTLQLWDTSGQERFRSLEISYYRGADYCILVFDVTNEKTLYDLKLWRDDFIEKTEIRDPILFPFIILGNKIDDPNRVVTEKAAIQWCKDNIGGNLTYFDTSAKDNINIEQVF----KHISNQCENQPQSNEIPPEQLISLTEKKSNQSSCC 197          
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RSR1_CANAL (Ras-related protein RSR1 OS=Candida albicans GN=RSR1 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.153e-23
Identity = 60/169 (35.50%), Postives = 98/169 (57.99%), Query Frame = 1
Query:  166 FKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYA-SENVNKLLVGNKCDLTDKKVVSYETAKAFADEIG-IPFMETSAXDSMNVEQAFMAMTADIKNRMAS 666
            +K++++G  GVGKS + ++F    Y++SY  TI   ++ + +E DG+   L+I DTAG  +F  +   Y +   G ++VY VTD+ S   +     ++ R   S+NV  +LVGNKCDL D +V+S E     + + G +PF ETSA    NV++AF+ +   I  + A+
Sbjct:    4 YKVVVLGAGGVGKSSITVQFVQGVYVESYDPTIEDSYR-KQIEVDGRACDLEILDTAGVAQFTAMRELYIKSGKGFLLVYSVTDENSLKELLALREQVLRIKDSDNVPMVLVGNKCDLEDDRVLSIEDGVKVSQDWGLVPFYETSAMYKTNVDEAFIDVVRQIMRKEAA 171          
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RASG_DICDI (Ras-like protein rasG OS=Dictyostelium discoideum GN=rasG PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.424e-23
Identity = 60/180 (33.33%), Postives = 99/180 (55.00%), Query Frame = 1
Query:  166 FKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASEN-VNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNRMA--SQPAMNNARPP 696
            +KL+++G  GVGKS L ++   + ++D Y  TI   ++ + V  D +T  L I DTAGQE +  +   Y R   G + VY +T + SF+ +  +  +I R   ++ V  ++VGNKCDL   + V+    +  A   G PF+ETSA   +NVE+AF ++  +I+  +   S+P     + P
Sbjct:    4 YKLVIVGGGGVGKSALTIQLIQNHFIDEYDPTIEDSYR-KQVTIDEETCLLDILDTAGQEEYSAMRDQYMRTGQGFLCVYSITSRSSFDEIASFREQILRVKDKDRVPMIVVGNKCDLESDRQVTTGEGQDLAKSFGSPFLETSAKIRVNVEEAFYSLVREIRKDLKGDSKPEKGKKKRP 182          
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAS2_PHYPO (Ras-like protein 2 OS=Physarum polycephalum GN=RAS-2 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.424e-23
Identity = 56/166 (33.73%), Postives = 93/166 (56.02%), Query Frame = 1
Query:  166 FKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASEN-VNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNRM 660
            +KL+++G  GVGKS L ++   + ++D Y  TI   ++ + V  D +T  L I DTAGQE +  +   Y R   G ++VY +T + SF+ +  +  +I R   ++ V  +L GNKCDL  ++ V+    +  A   G PF+ETSA   +NVE+ F  +  +I+  +
Sbjct:    6 YKLVIVGGGGVGKSALTIQLIQNHFIDEYDPTIEDSYR-KQVVIDEETCLLDILDTAGQEEYSAMRDQYMRTGQGFVMVYSITSRSSFDEINAFREQILRVKDKDTVPMVLAGNKCDLASERQVTTNEGQELARAFGCPFVETSAKARLNVEECFYGLVREIRKEV 170          
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAS1_RHIRA (Ras-like protein 1 OS=Rhizomucor racemosus GN=RAS1 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.424e-23
Identity = 57/163 (34.97%), Postives = 90/163 (55.21%), Query Frame = 1
Query:  166 FKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKL-LVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIK 651
            +KL+++G  GVGKS L ++F    ++D Y  TI   ++ + V  D +T  L + DTAGQE +  +   Y R   G ++VY +T + SF  +  +  +I R    +   + LVGNKCDL   + VS +  +  A   G  F+ETSA   +NV++AF  +  DI+
Sbjct:   11 YKLVMVGGGGVGKSALTIQFIQSHFVDEYDPTIEDSYRKQCVI-DSETALLDVLDTAGQEEYSAMREQYMRNGEGFLLVYSITSRLSFEEITTFYQQICRVKDRDYFPMVLVGNKCDLEGDRQVSSQEGRDLAKNFGCQFIETSAKQRINVDEAFFEVVRDIR 172          
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAS1_PHYPO (Ras-like protein 1 OS=Physarum polycephalum GN=RAS1 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.424e-23
Identity = 57/163 (34.97%), Postives = 93/163 (57.06%), Query Frame = 1
Query:  166 FKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASEN-VNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIK 651
            +KL+++G  GVGKS L ++   + ++D Y  TI   ++ + V  D +T  L I DTAGQE +  +   Y R   G + VY +T + SF+ +  +  +I R   ++ V  ++VGNKCDL  ++ V+    +  A   G PFMETSA   +NVE++F  +  +I+
Sbjct:    4 YKLVIVGGGGVGKSALTIQLIQNHFIDEYDPTIEDSYR-KQVTIDEETCLLDILDTAGQEEYSAMRDQYMRTGQGFLCVYSITSRSSFDEIASFREQILRVKDKDKVPMIVVGNKCDLEGERQVTTGEGQDLARSFGCPFMETSAKSRVNVEESFYQLVREIR 165          
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RB32B_DICDI (Ras-related protein Rab-32B OS=Dictyostelium discoideum GN=rab32B PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.083e-23
Identity = 66/202 (32.67%), Postives = 104/202 (51.49%), Query Frame = 1
Query:  160 YLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVE-QDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYA----SENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKN--RMASQPAMNNARPPTVQIKGQPVNQKASCC 744
            +L+K+LLIGD  VGKS ++ R+    +  +Y  TIGVDF ++ +E +  K V LQ+WD AG ERF T+T  YYR A   IIV+D++   +F+ V +W  +++        E +  LL+ NK DL+   V S    +   +   I +  TSA +  N+ +A   +T +I    +    P          +  G+  +   SCC
Sbjct:   58 HLYKVLLIGDYAVGKSSIIKRYCTGIFSPNYKLTIGVDFSVKDIEWEKNKIVSLQLWDIAGHERFGTMTRVYYRYAIAAIIVFDLSRPSTFDAVTKWREDVNSKVVLANQEPIPVLLLANKSDLSTSYVDSEMLDRFCKENNFIGWFATSASNDTNINEAMHFLTKEILEVAKTNHPPKPEEDTLELTKTNGEKSDDSKSCC 259          
The following BLAST results are available for this feature:
BLAST of FC873817 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RAS_BOTFU3.180e-2331.19Ras-like protein OS=Botryotinia fuckeliana GN=ras1... [more]
RAS1_DROPS3.180e-2337.42Ras-like protein 1 OS=Drosophila pseudoobscura pse... [more]
RAS1_DROPE3.180e-2337.42Ras-like protein 1 OS=Drosophila persimilis GN=Ras... [more]
RAB7B_DICDI3.180e-2333.50Ras-related protein Rab-7B OS=Dictyostelium discoi... [more]
RSR1_CANAL4.153e-2335.50Ras-related protein RSR1 OS=Candida albicans GN=RS... [more]
RASG_DICDI5.424e-2333.33Ras-like protein rasG OS=Dictyostelium discoideum ... [more]
RAS2_PHYPO5.424e-2333.73Ras-like protein 2 OS=Physarum polycephalum GN=RAS... [more]
RAS1_RHIRA5.424e-2334.97Ras-like protein 1 OS=Rhizomucor racemosus GN=RAS1... [more]
RAS1_PHYPO5.424e-2334.97Ras-like protein 1 OS=Physarum polycephalum GN=RAS... [more]
RB32B_DICDI7.083e-2332.67Ras-related protein Rab-32B OS=Dictyostelium disco... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2AF10FM1 AbsDev Citrus clementina cDNA clone KN0AAI2AF10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873817 ID=FC873817; Name=FC873817; organism=Citrus clementina; type=EST; length=801bp
CATCATCATCGACATTTTGCTTTCTTCGTCAAATTCTCTCTCAATCTCAC
CTCCTTAGCTTGTCTGTGCCAAACTCCCGGTCCAATCTCCAGCTGGACCG
GTTCGATTCTGCGCGAACCCCCTCAACATCTTATTGCAGTCATGAATCCT
GAATATGACTACTTGTTCAAGCTTTTGCTGATTGGAGACTCTGGAGTTGG
CAAATCGTGTCTTCTTCTGAGATTTGCTGATGATTCGTACCTGGACAGTT
ACATTAGCACTATTGGGGTTGACTTTAAAATTCGCACAGTGGAGCAAGAC
GGGAAGACTGTAAAACTCCAAATTTGGGACACTGCAGGGCAAGAACGATT
CAGGACAATCACTAGCAGCTACTACCGTGGAGCACATGGCATTATCATTG
TTTATGATGTTACAGACCAAGAGAGCTTCAACAACGTTAAGCAGTGGTTG
AATGAAATTGATCGCTATGCAAGTGAAAATGTAAACAAGCTTCTGGTTGG
AAACAAGTGTGATCTCACTGATAAGAAGGTTGTCTCTTATGAAACAGCGA
AGGCATTTGCTGATGAAATTGGCATCCCGTTCATGGAGACCAGCGCANAG
GATTCTATGAACGTGGAACAAGCTTTTATGGCTATGACTGCTGACATTAA
GAACAGGATGGCAAGTCAACCTGCAATGAACAATGCAAGGCCACCAACTG
TGCAGATAAAAGGACAACCGGTGAACCAGAAAGCCAGCTGCTGCTCAACT
TAATCGTTTGTCTTATCCTTCATTGCGTGCATTTGTTTANTGGGTAGCTT
T
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