FC873817
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: GSP2_YEAST (GTP-binding nuclear protein GSP2/CNR2 OS=Saccharomyces cerevisiae GN=GSP2 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.131e-20 Identity = 60/192 (31.25%), Postives = 100/192 (52.08%), Query Frame = 1 Query: 166 FKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKN----RMASQPAMNNARPPTVQIKGQPVNQ 729 FKL+L+GD G GK+ + R + YI+TIGV+ + + +K +WDTAGQE+F + YY A II++DVT + ++ NV W ++ R EN+ +L GNK D+ ++KV + F + + + + SA + N E+ F+ + + + PA+ PP VQ+ Q ++Q Sbjct: 14 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFDVWDTAGQEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDLVR-VCENIPIVLCGNKVDVKERKVKA--KTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLAGNPQLEFVASPAL---APPEVQVDEQLMHQ 199
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RIT1_MOUSE (GTP-binding protein Rit1 OS=Mus musculus GN=Rit1 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.477e-20 Identity = 57/165 (34.55%), Postives = 89/165 (53.94%), Query Frame = 1 Query: 166 FKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRY-ASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNR 657 +KL+++G GVGKS + ++F + + + TI +KIR + D + L I DTAGQ F + Y R G II Y +TD+ SF+ V+++ I R +++ +LVGNK DL + VS E + A E PF ETSA ++ F A+ +I+ + Sbjct: 22 YKLVMLGAGGVGKSAMTMQFISHRFPEDHDPTIEDAYKIR-IRIDDEPANLDILDTAGQAEFTAMRDQYMRAGEGFIICYSITDRRSFHEVREFKQLIYRVRRTDDTPVVLVGNKSDLKQLRQVSKEEGLSLAREFSCPFFETSAAYRYYIDDVFHALVREIRKK 185
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RIT1_HUMAN (GTP-binding protein Rit1 OS=Homo sapiens GN=RIT1 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.477e-20 Identity = 57/165 (34.55%), Postives = 89/165 (53.94%), Query Frame = 1 Query: 166 FKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRY-ASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNR 657 +KL+++G GVGKS + ++F + + + TI +KIR + D + L I DTAGQ F + Y R G II Y +TD+ SF+ V+++ I R +++ +LVGNK DL + V+ E A A E PF ETSA ++ F A+ +I+ + Sbjct: 22 YKLVMLGAGGVGKSAMTMQFISHRFPEDHDPTIEDAYKIR-IRIDDEPANLDILDTAGQAEFTAMRDQYMRAGEGFIICYSITDRRSFHEVREFKQLIYRVRRTDDTPVVLVGNKSDLKQLRQVTKEEGLALAREFSCPFFETSAAYRYYIDDVFHALVREIRRK 185
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RASY_DICDI (Ras-like protein rasY OS=Dictyostelium discoideum GN=rasY PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.477e-20 Identity = 57/177 (32.20%), Postives = 98/177 (55.37%), Query Frame = 1 Query: 163 LFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYAS-ENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNRMASQPAMNNAR 690 L KL ++GD GVGK+ + ++F + ++ Y TI ++ + + D + L I DTAGQ+ + + R G I+VY VT + SF+ V+ + +I R ++V +++GNK DL D++ V+++ K A +G+ FME SA +NVE+ F +K R S +N++ Sbjct: 10 LVKLCIMGDGGVGKTSVTIQFISNHFVHYYDPTIEDSYRKQCLIDD-QVYMLDILDTAGQDELTAMRDQWIRSCEGFILVYSVTSRSSFDQVQFFREQIIRVLDRDDVPIMMIGNKSDLDDERQVTFQEGKDLARCLGMSFMEVSAKTRLNVEEVFNETVRCVKRREESLLKKDNSK 185
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: GSP1_YEAST (GTP-binding nuclear protein GSP1/CNR1 OS=Saccharomyces cerevisiae GN=GSP1 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.477e-20 Identity = 60/192 (31.25%), Postives = 99/192 (51.56%), Query Frame = 1 Query: 166 FKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKN----RMASQPAMNNARPPTVQIKGQPVNQ 729 FKL+L+GD G GK+ + R + YI+TIGV+ + + +K +WDTAGQE+F + YY A II++DVT + ++ NV W ++ R EN+ +L GNK D+ ++KV + F + + + + SA + N E+ F+ + + + PA+ PP VQ+ Q + Q Sbjct: 13 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFDVWDTAGQEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDLVR-VCENIPIVLCGNKVDVKERKVKA--KTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLAGNPQLEFVASPAL---APPEVQVDEQLMQQ 198
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RP1BL_HUMAN (Ras-related protein Rap-1b-like protein OS=Homo sapiens PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.929e-20 Identity = 56/166 (33.73%), Postives = 93/166 (56.02%), Query Frame = 1 Query: 166 FKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYA-SENVNKLLVGNKCDLTDKKVVSYETAKAFADE-IGIPFMETSAXDSMNVEQAFMAMTADIKNR 657 +KL+++G GVGKS L ++F +++ Y TI ++ VE D + L+I DTAG E+F + Y + G +VY +T Q +FN+++ +I R +++V +LVGNKCDL D++VV E + A + F+E+SA +NV + F + I + Sbjct: 4 YKLVVLGSRGVGKSALTVQFVQGIFVEKYDPTIEDSYR-EQVEVDAQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQINRK 168
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RASX_DICDI (Ras-like protein rasX OS=Dictyostelium discoideum GN=rasX PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.929e-20 Identity = 54/166 (32.53%), Postives = 92/166 (55.42%), Query Frame = 1 Query: 163 LFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYA-SENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNR 657 L KL ++GD GVGK+ + ++F + ++ Y TI ++ + V D + L I DTAGQ+ + + R G ++VY VT + SF+ + + +I+R S++V +++GNK DL D++ V+Y+ K A G+ FME SA N+E+ F +K + Sbjct: 9 LVKLCIMGDGGVGKTAVTIQFISNHFVHYYDPTIEDSYRKQCVIDD-QVYMLDILDTAGQDELTAMRDQWIRSCEGFVLVYSVTSRSSFDQIAFFKEQINRVLDSDDVPIMMIGNKSDLDDERQVTYQEGKDLARCFGMSFMEVSAKTRSNIEEVFNETVRCVKRK 173
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RASN_DANRE (GTPase NRas OS=Danio rerio GN=nras PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.929e-20 Identity = 58/164 (35.37%), Postives = 92/164 (56.10%), Query Frame = 1 Query: 166 FKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYA-SENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKN 654 +KL+++G GVGKS L ++ + ++D Y TI ++ + V DG+T L I DTAGQE + + Y R G + V+ + + +SF +V + +I R S++V +LVGN CDL + V + A+ A GI F+ETSA VE AF + +I++ Sbjct: 4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNSKSFADVHLYREQIKRVKDSDDVPMVLVGNICDLA--RTVDTKQAQELARSYGIEFVETSAKTRQGVEDAFYTLVREIRH 164
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RANL_DROME (GTP-binding nuclear protein Ran-like OS=Drosophila melanogaster GN=ran-like PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.929e-20 Identity = 55/185 (29.73%), Postives = 98/185 (52.97%), Query Frame = 1 Query: 151 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQ 705 E +FKL+LIGD G GK+ L+ R + Y +T+GV+ + + ++ +WDTAGQER+ + Y+ + II++DV ++NNVK+W ++ R N+ ++ GNK D+ KK +++ F + I +E SA + NVE+ F+ + ++ P++ + P +Q Sbjct: 6 EVKAIFKLILIGDGGTGKTTLVKRHLTGEFKMQYNATLGVEVEQLLFNTNRGVFRIDVWDTAGQERYGGLRDGYFVQSQCAIIMFDVASSNTYNNVKRWHRDLVRVCG-NIPIVICGNKVDIMHKK--TWKKGVDFDRKTNIYLIEMSAKSNYNVEKPFVYLL----RKLVGDPSLQLVQSPAIQ 183
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RASZ_DICDI (Ras-like protein rasZ OS=Dictyostelium discoideum GN=rasZ PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.519e-20 Identity = 54/169 (31.95%), Postives = 93/169 (55.03%), Query Frame = 1 Query: 163 LFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYAS-ENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNRMAS 666 L +L ++GD GVGK+ + ++F + ++ Y TI ++ + V D + L I DTAGQ+ + + R G ++VY +T + SF+ V+ + +I R ++V +++GNK DL D++ V+Y+ K A +G+ FME SA N+E+ F +K R S Sbjct: 9 LVRLCIMGDGGVGKTAVTIQFISNHFVYYYDPTIEDSYRKQCVIDD-QVYMLDILDTAGQDELTAMRDQWIRSCEGFVLVYSITSRSSFDQVQFFREQIIRVLDRDDVPIMMIGNKSDLDDERQVTYQEGKDLARCLGMSFMEVSAKSRANIEEVFNETVRSVKRREES 176 The following BLAST results are available for this feature:
BLAST of FC873817 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873817 ID=FC873817; Name=FC873817; organism=Citrus clementina; type=EST; length=801bpback to top |