FC873817
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAB8B_HUMAN (Ras-related protein Rab-8B OS=Homo sapiens GN=RAB8B PE=1 SV=2) HSP 1 Score: 226.098 bits (575), Expect = 1.785e-58 Identity = 102/173 (58.96%), Postives = 139/173 (80.35%), Query Frame = 1 Query: 142 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNRM 660 M YDYLFKLLLIGDSGVGK+CLL RF++D++ ++ISTIG+DFKIRT+E DGK +KLQIWDTAGQERFRTIT++YYRGA GI++VYD+T+++SF+N+K W+ I+ +AS +V ++++GNKCD+ DK+ VS E + A + GI F+ETSA S NVE+AF + DI ++ Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIMTKL 173
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAB13_HUMAN (Ras-related protein Rab-13 OS=Homo sapiens GN=RAB13 PE=1 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 1.785e-58 Identity = 106/190 (55.79%), Postives = 144/190 (75.79%), Query Frame = 1 Query: 142 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIK 711 M YD+LFKLLLIGDSGVGK+CL++RFA+D++ ++YISTIG+DFKIRTV+ +GK +KLQ+WDTAGQERF+TIT++YYRGA GII+VYD+TD++SF N++ W+ I AS V +LL+GNKCD+ K+ V E A A E GI F ETSA SMNV++AF ++ DI + + + N +PP+ +K Sbjct: 1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGNGNKPPSTDLK 190
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAB13_MESAU (Ras-related protein Rab-13 OS=Mesocricetus auratus GN=RAB13 PE=2 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 3.976e-58 Identity = 107/200 (53.50%), Postives = 146/200 (73.00%), Query Frame = 1 Query: 142 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVNQKASC 741 M YD+LFKLLLIGDSGVGK+CL++RFA+D++ ++YISTIG+DFKIRTVE +GK +KLQ+WDTAGQERF+TIT++YYRGA GII+VYD+TD++SF N++ W+ I AS V +LL+GNKCD+ K+ V E A A E GI F ETSA SMNV++AF ++ DI + + + N+++P + +K C Sbjct: 1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVLKEQADKLAREHGIRFFETSAKSSMNVDEAFNSLARDILLKSGGRRSGNHSKPSSTDLKPSDKKNTNKC 200
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RYL1_YARLI (Ras-like GTP-binding protein RYL1 OS=Yarrowia lipolytica GN=RYL1 PE=3 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 6.782e-58 Identity = 106/197 (53.81%), Postives = 143/197 (72.59%), Query Frame = 1 Query: 154 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVNQKASCC 744 YD L KLLLIGDSGVGKSCLLLRF +D + S+I+TIG+DFKIRT++ + VKLQ+WDTAGQERFRTIT++YYRGA GI++VYDVTD++SFNN++ W + YA+E V +LVGNKCDL +K+VVS E +A AD+ GIPF+E S+ ++NVE+ F ++ I++ +A N + + I N + CC Sbjct: 8 YDLLIKLLLIGDSGVGKSCLLLRFCEDQFTPSFITTIGIDFKIRTIDIGNQRVKLQVWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIENWYQNVQSYANEGVELILVGNKCDLDEKRVVSTEQGQALADKFGIPFLEASSKTNINVEECFYSVATRIRDTVAKTKG-NESGSGGINIAEGEENSASKCC 203
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAB13_RAT (Ras-related protein Rab-13 OS=Rattus norvegicus GN=Rab13 PE=2 SV=2) HSP 1 Score: 221.861 bits (564), Expect = 3.366e-57 Identity = 105/200 (52.50%), Postives = 145/200 (72.50%), Query Frame = 1 Query: 142 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVNQKASC 741 M YD+LFKLLLIGDSGVGK+CL++RFA+D++ +YISTIG+DFKIRTVE +GK +KLQ+WDTAGQERF+TIT++YYRGA GII+VYD+TD++SF N++ W+ I AS V +LL+GNKCD+ K+ V E A+ A E I F ETSA S+NV++AF ++ DI + + + N+++P + +K C Sbjct: 1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQREQAERLAREHRIRFFETSAKSSVNVDEAFSSLARDILLKTGGRRSGNSSKPSSTDLKVSDKKNSNKC 200
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAB13_MOUSE (Ras-related protein Rab-13 OS=Mus musculus GN=Rab13 PE=2 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 2.182e-56 Identity = 103/190 (54.21%), Postives = 143/190 (75.26%), Query Frame = 1 Query: 142 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIK 711 M YD+LFKLLLIGDSGVGK+CL++RFA+D++ +YISTIG+DFKIRTV+ +GK +KLQ+WDTAGQERF+TIT++YYRGA GII+VYD+TD++SF N++ W+ I AS V +LL+GNKCD+ K+ V E A+ A E I F ETSA S+NV++AF ++ DI + + + N++P + +K Sbjct: 1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRQVQREQAEKLAREHRIRFFETSAKSSVNVDEAFSSLARDILLKTGGRRSGTNSKPSSTGLK 190
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAB1_THEPA (Ras-related protein Rab-1 OS=Theileria parva GN=rab1 PE=1 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 6.347e-56 Identity = 108/187 (57.75%), Postives = 145/187 (77.54%), Query Frame = 1 Query: 151 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQI 708 EYDYLFK+++IGDSG GKS LLLRFAD++Y +SY+STIGVDFKI+TV+ D T+KLQIWDTAGQERFRTITS+YYRGAHGII VYDVT++ SF+++ + WL +ID+YA+ NV KLL+GNK DL + +VVS + AK A++ + ++E SA NVE+AF + +K+++ P +NA TV + Sbjct: 3 EYDYLFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQIWDTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVCKLLIGNKIDLAESRVVSADEAKHVAEQNNMNYIEASAKTDSNVEKAFTTIAKALKDKVTQYP--SNAPASTVSL 187
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAB1_THEAN (Ras-related protein Rab-1 OS=Theileria annulata GN=rab1 PE=3 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 1.083e-55 Identity = 108/187 (57.75%), Postives = 144/187 (77.01%), Query Frame = 1 Query: 151 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQI 708 EYDYLFK+++IGDSG GKS LLLRFAD++Y +SY+STIGVDFKI+TV+ D T+KLQIWDTAGQERFRTITS+YYRGAHGII VYDVT++ SF+++ + WL +ID+YA+ NV KLL+GNK DL D +VV + AK A++ + ++E SA NVE+AF + +K+++ P +NA TV + Sbjct: 3 EYDYLFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQIWDTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVCKLLIGNKIDLVDSRVVLADEAKHVAEQNNMNYIEASAKTDSNVEKAFTTIAKALKDKVTQYP--SNAPTSTVNL 187
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAB10_PONAB (Ras-related protein Rab-10 OS=Pongo abelii GN=RAB10 PE=2 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 1.083e-55 Identity = 105/198 (53.03%), Postives = 143/198 (72.22%), Query Frame = 1 Query: 154 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADI-KNRMASQPAMNNARPPTVQIKGQPVNQKASCC 744 YD LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TVE GK +KLQIWDTAGQERF TIT+SYYRGA GI++VYD+T+ +SF N+ +WL ID +A+E+V ++L+GNKCD+ DK+VV + A E GI F ETSA ++N+E+AF+ + DI + +P N+ + G K+ CC Sbjct: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEP---NSENVDISSGGGVTGWKSKCC 200
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAB10_MOUSE (Ras-related protein Rab-10 OS=Mus musculus GN=Rab10 PE=1 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 1.083e-55 Identity = 105/198 (53.03%), Postives = 143/198 (72.22%), Query Frame = 1 Query: 154 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADI-KNRMASQPAMNNARPPTVQIKGQPVNQKASCC 744 YD LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TVE GK +KLQIWDTAGQERF TIT+SYYRGA GI++VYD+T+ +SF N+ +WL ID +A+E+V ++L+GNKCD+ DK+VV + A E GI F ETSA ++N+E+AF+ + DI + +P N+ + G K+ CC Sbjct: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEP---NSENVDISSGGGVTGWKSKCC 200 The following BLAST results are available for this feature:
BLAST of FC873817 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873817 ID=FC873817; Name=FC873817; organism=Citrus clementina; type=EST; length=801bpback to top |