FC873817
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAB10_HUMAN (Ras-related protein Rab-10 OS=Homo sapiens GN=RAB10 PE=1 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 1.083e-55 Identity = 105/198 (53.03%), Postives = 143/198 (72.22%), Query Frame = 1 Query: 154 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADI-KNRMASQPAMNNARPPTVQIKGQPVNQKASCC 744 YD LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TVE GK +KLQIWDTAGQERF TIT+SYYRGA GI++VYD+T+ +SF N+ +WL ID +A+E+V ++L+GNKCD+ DK+VV + A E GI F ETSA ++N+E+AF+ + DI + +P N+ + G K+ CC Sbjct: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEP---NSENVDISSGGGVTGWKSKCC 200
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAB10_CANFA (Ras-related protein Rab-10 OS=Canis familiaris GN=RAB10 PE=2 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.414e-55 Identity = 105/198 (53.03%), Postives = 143/198 (72.22%), Query Frame = 1 Query: 154 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADI-KNRMASQPAMNNARPPTVQIKGQPVNQKASCC 744 YD LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TVE GK +KLQIWDTAGQERF TIT+SYYRGA GI++VYD+T+ +SF N+ +WL ID +A+E+V ++L+GNKCD+ DK+VV + A E GI F ETSA ++N+E+AF+ + DI + +P N+ + G K+ CC Sbjct: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKVNINIEKAFLTLAEDILRKTPVKEP---NSENVDISSGGGVTGWKSKCC 200
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAB10_CHICK (Ras-related protein Rab-10 OS=Gallus gallus GN=RAB10 PE=2 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 3.150e-55 Identity = 104/198 (52.53%), Postives = 142/198 (71.72%), Query Frame = 1 Query: 154 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADI-KNRMASQPAMNNARPPTVQIKGQPVNQKASCC 744 YD LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+D KI+TVE GK +KLQIWDTAGQERF TIT+SYYRGA GI++VYD+T+ +SF N+ +WL ID +A+E+V ++L+GNKCD+ DK+VV + A E GI F ETSA ++N+E+AF+ + DI + +P N+ + G K+ CC Sbjct: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDLKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEP---NSENVDISSGGGVTGWKSKCC 200
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAB10_DISOM (Ras-related protein Rab-10 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 2.667e-54 Identity = 98/165 (59.39%), Postives = 131/165 (79.39%), Query Frame = 1 Query: 154 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADI 648 YD LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TVE GK +KLQIWDTAGQERF TIT+SYYRGA GI++VYD+T+ +SF N+ +WL ID +A+E+V ++L+GNKCD+ DK+VV + A E I F ETSA ++N+E+AF+ + DI Sbjct: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELHGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDKRVVLKSKGEQIAREHAIRFFETSAKANINIEKAFLTLAEDI 170
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RABA_DICDI (Ras-related protein RabA OS=Dictyostelium discoideum GN=rabA PE=2 SV=2) HSP 1 Score: 210.305 bits (534), Expect = 1.013e-53 Identity = 102/201 (50.75%), Postives = 149/201 (74.13%), Query Frame = 1 Query: 142 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNRMAS-QPAMNNARPPTVQIKGQPVNQKASC 741 M+ +Y++LFK + +GDSGVGKS +LLRF +D++ +SYISTIGVDFKI+TV +GK +KLQIWDTAGQERFR +S YRG H +++VYDVTDQ SF NV +W+ EI+RYA +NV K+++GNK D+ +KVV A+ FAD + I F ETSA ++N+E AF+++ +R+ +P+ ++ T+ +K +P +QK++C Sbjct: 1 MSKKYEHLFKFIFVGDSGVGKSSILLRFTEDTFTESYISTIGVDFKIKTVYIEGKAIKLQIWDTAGQERFRVHNNSQYRGCHAVMVVYDVTDQRSFENVAKWIQEIERYARDNVIKMIIGNKSDMISQKVVDPFLAQEFADSLDITFKETSAKQAINIEDAFISLVKLCIDRIEEFKPSSTSS--STIILK-KPQSQKSNC 198
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAB35_RAT (Ras-related protein Rab-35 OS=Rattus norvegicus GN=Rab35 PE=2 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 1.013e-53 Identity = 106/166 (63.86%), Postives = 135/166 (81.33%), Query Frame = 1 Query: 142 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMT 639 M +YD+LFKLL+IGDSGVGKS LLLRFAD+++ SYI+TIGVDFKIRTVE +G+ VKLQIWDTAGQERFRTITS+YYRG HG+I+VYDVT ESF NVK+WL+EI++ ++V ++LVGNK D ++KVV E A FA ++GI ETSA +++NVE+ F +T Sbjct: 1 MARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC-DDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCIT 165
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAB35_MOUSE (Ras-related protein Rab-35 OS=Mus musculus GN=Rab35 PE=1 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 1.013e-53 Identity = 106/166 (63.86%), Postives = 135/166 (81.33%), Query Frame = 1 Query: 142 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMT 639 M +YD+LFKLL+IGDSGVGKS LLLRFAD+++ SYI+TIGVDFKIRTVE +G+ VKLQIWDTAGQERFRTITS+YYRG HG+I+VYDVT ESF NVK+WL+EI++ ++V ++LVGNK D ++KVV E A FA ++GI ETSA +++NVE+ F +T Sbjct: 1 MARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC-DDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCIT 165
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RAB35_HUMAN (Ras-related protein Rab-35 OS=Homo sapiens GN=RAB35 PE=1 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 1.013e-53 Identity = 106/166 (63.86%), Postives = 135/166 (81.33%), Query Frame = 1 Query: 142 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMT 639 M +YD+LFKLL+IGDSGVGKS LLLRFAD+++ SYI+TIGVDFKIRTVE +G+ VKLQIWDTAGQERFRTITS+YYRG HG+I+VYDVT ESF NVK+WL+EI++ ++V ++LVGNK D ++KVV E A FA ++GI ETSA +++NVE+ F +T Sbjct: 1 MARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC-DDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCIT 165
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: RABG2_DICDI (Ras-related protein RabG2 OS=Dictyostelium discoideum GN=rabG2 PE=3 SV=2) HSP 1 Score: 209.534 bits (532), Expect = 1.729e-53 Identity = 101/176 (57.39%), Postives = 138/176 (78.41%), Query Frame = 1 Query: 163 LFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADI-KNRM-ASQPAMNN 684 +FK+LLIGDS VGK+ LLLRFAD+S+ ++ ++ VD+K + + DG+T LQIWDTAGQERFRTITSS+YRGAHG+++ YDVTDQ ++NNV+ W+ EI RYA V+++LVGNKCDL D+K+V+ A+ +AD +GIPFME SA +NVE+AFMAM +I +N M S+P++ N Sbjct: 6 VFKILLIGDSAVGKTSLLLRFADNSFQETSVNMTSVDYKNKNIVIDGRTFNLQIWDTAGQERFRTITSSFYRGAHGVLVCYDVTDQLTYNNVRLWMQEIQRYAVLGVSRVLVGNKCDLEDRKLVNTSIAREYADSLGIPFMEASAATGVNVEEAFMAMANEIYRNHMGGSKPSVVN 181
BLAST of FC873817 vs. ExPASy Swiss-Prot
Match: SEC4_CANGA (Ras-related protein SEC4 OS=Candida glabrata GN=SEC4 PE=3 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 6.569e-53 Identity = 101/200 (50.50%), Postives = 145/200 (72.50%), Query Frame = 1 Query: 154 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAXDSMNVEQAFMAMTADIKNRMASQ--PAMNNARPPTVQIK-GQPVNQKASCC 744 YD + K+LLIGDSGVGKSCLL+RF +D + S+I+TIG+DFKI+TV+ +GK VKLQ+WDTAGQERFRTIT++YYRGA GII+VYDVTD+ +F N+KQW ++ +A++ LLVGNK D+ D +VV+YE +A A E+G+PF+E+SA + NV + F + I+ ++ S N+ + + I + + K++CC Sbjct: 17 YDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFANIKQWFKTVNEHANDEAQLLLVGNKSDM-DTRVVTYEQGEALAKELGLPFIESSAKNDDNVNEIFFTLARLIQEKIDSNKLSGPNSGKDGNISINANKGDSSKSNCC 215 The following BLAST results are available for this feature:
BLAST of FC873817 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873817 ID=FC873817; Name=FC873817; organism=Citrus clementina; type=EST; length=801bpback to top |