FC873818
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873818 vs. ExPASy Swiss-Prot
Match: CAIC_SALA4 (Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella agona (strain SL483) GN=caiC PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.606e-11 Identity = 68/257 (26.46%), Postives = 111/257 (43.19%), Query Frame = 3 Query: 30 HFTVLSEADEDQIPEV-AIKPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIR---GPQIMKGYLNDPEGTAATIDVE 788 HFT L + A+ DD + F+SGTT PKGVV+TH +L + + L + DV + V+P FHI + + + AG+ +L++K+ A + +++++ + P +R V+ L ++ +D R +L YGMTE + K+ +P S G V + E ++ D + LP + GEICI+ G I K Y PE TA ++ E Sbjct: 152 HFTQLQSRQSTTLCYTPALSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSA----WQIALRDDDVYMTVMPAFHIDCQCTAAMPAFSAGSTFVLLEKYSARAFWDQVRKYQATVTECIPMMIRTLMVQPAAPTDRQHHLREVMF-YLNLSEQEKDDFTERFGVRLL-TSYGMTETIVGIIGDRPGDKRRWP----SIGRVGFSYEAEIRD-DQNRPLPAGEIGEICIKGIPGKTIFKEYYMQPEATARALEPE 397
BLAST of FC873818 vs. ExPASy Swiss-Prot
Match: CAIC_ECOUT (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli (strain UTI89 / UPEC) GN=caiC PE=3 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 4.606e-11 Identity = 66/241 (27.39%), Postives = 106/241 (43.98%), Query Frame = 3 Query: 81 IKPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTE--AGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIR---GPQIMKGYLNDPEGTAATIDVE 788 + DD + F+SGTT PKGVV+TH +L + L + DV L V+P FHI + + + AGA +L++K+ A +Q++R + P A+ +R V+ L ++ +DA R +L YGMTE G + + P ++G C AE++ + LP + GEICI+ G I K Y +P+ TA ++ + Sbjct: 170 LSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSA----WQCALRDDDVYLTVMPAFHIDCQCTAAMAAFSAGATFVLVEKYSARAFWGQVQKYRATITECIPMMIRTLMVQPPSANDRQHRLREVMF-YLNLSEQEKDAFCERFGVRLL-TSYGMTETIVGIIGDRPGDKRRWPSIGRAGFC----YEAEIR---DDHNRPLPAGELGEICIKGVPGKTIFKEYFLNPKATAKVLEAD 397
BLAST of FC873818 vs. ExPASy Swiss-Prot
Match: CAIC_ECOSM (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=caiC PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.606e-11 Identity = 66/241 (27.39%), Postives = 105/241 (43.57%), Query Frame = 3 Query: 81 IKPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTE--AGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIR---GPQIMKGYLNDPEGTAATIDVE 788 + DD + F+SGTT PKGVV+TH +L + L + DV L V+P FHI + + + AGA +L++K+ A +Q++R + P A+ +R V+ L + +DA R +L YGMTE G + + P ++G C AE++ + LP + GEICI+ G I K Y +P+ TA ++ + Sbjct: 170 LSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSA----WQCALRDDDVYLTVMPAFHIDCQCTAAMAAFSAGATFVLVEKYSARAFWGQVQKYRATITECIPMMIRTLMVQPPSANDQQHRLREVMF-YLNLSAQEKDAFCERFGVRLL-TSYGMTETIVGIIGDRPGDKRRWPSIGRAGFC----YEAEIR---DDHNRPLPAGEIGEICIKGVPGKTIFKEYFLNPKATAKVLEAD 397
BLAST of FC873818 vs. ExPASy Swiss-Prot
Match: CAIC_ECOK1 (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli O1:K1 / APEC GN=caiC PE=3 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 4.606e-11 Identity = 66/241 (27.39%), Postives = 106/241 (43.98%), Query Frame = 3 Query: 81 IKPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTE--AGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIR---GPQIMKGYLNDPEGTAATIDVE 788 + DD + F+SGTT PKGVV+TH +L + L + DV L V+P FHI + + + AGA +L++K+ A +Q++R + P A+ +R V+ L ++ +DA R +L YGMTE G + + P ++G C AE++ + LP + GEICI+ G I K Y +P+ TA ++ + Sbjct: 170 LSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSA----WQCALRDDDVYLTVMPAFHIDCQCTAAMAAFSAGATFVLVEKYSARAFWGQVQKYRATITECIPMMIRTLMVQPPSANDRQHRLREVMF-YLNLSEQEKDAFCERFGVRLL-TSYGMTETIVGIIGDRPGDKRRWPSIGRAGFC----YEAEIR---DDHNRPLPAGELGEICIKGVPGKTIFKEYFLNPKATAKVLEAD 397
BLAST of FC873818 vs. ExPASy Swiss-Prot
Match: CAIC_ECOHS (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli O9:H4 (strain HS) GN=caiC PE=3 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 4.606e-11 Identity = 66/241 (27.39%), Postives = 106/241 (43.98%), Query Frame = 3 Query: 81 IKPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTE--AGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIR---GPQIMKGYLNDPEGTAATIDVE 788 + DD + F+SGTT PKGVV+TH +L + L + DV L V+P FHI + + + AGA +L++K+ A +Q++R + P A+ +R V+ L ++ +DA R +L YGMTE G + + P ++G C AE++ + LP + GEICI+ G I K Y +P+ TA ++ + Sbjct: 170 LSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSA----WQCALRDDDVYLTVMPAFHIDCQCTAAMAAFSAGATFVLVEKYSARAFWGQVQKYRATITECIPMMIRTLMVQPPSANDRQHRLREVMF-YLNLSEQEKDAFCERFGVRLL-TSYGMTETIVGIIGDRPGDKRRWPSIGRAGFC----YEAEIR---DDHNRPLPAGEIGEICIKGVPGKTIFKEYFLNPKATAKVLEAD 397
BLAST of FC873818 vs. ExPASy Swiss-Prot
Match: CAIC_ECO8A (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli O8 (strain IAI1) GN=caiC PE=3 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 4.606e-11 Identity = 66/241 (27.39%), Postives = 106/241 (43.98%), Query Frame = 3 Query: 81 IKPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTE--AGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIR---GPQIMKGYLNDPEGTAATIDVE 788 + DD + F+SGTT PKGVV+TH +L + L + DV L V+P FHI + + + AGA +L++K+ A +Q++R + P A+ +R V+ L ++ +DA R +L YGMTE G + + P ++G C AE++ + LP + GEICI+ G I K Y +P+ TA ++ + Sbjct: 170 LSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSA----WQCALRDDDVYLTVMPAFHIDCQCTAAMAAFSAGATFVLVEKYSARAFWGQVQKYRATITECIPMMIRTLMVQPPSANDRQHRLREVMF-YLNLSEQEKDAFCERFGVRLL-TSYGMTETIVGIIGDRPGDKRRWPSIGRAGFC----YEAEIR---DDHNRPLPAGEIGEICIKGVPGKTIFKEYFLNPKATAKVLEAD 397
BLAST of FC873818 vs. ExPASy Swiss-Prot
Match: CAIC_ECO7I (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=caiC PE=3 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 4.606e-11 Identity = 66/241 (27.39%), Postives = 105/241 (43.57%), Query Frame = 3 Query: 81 IKPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTE--AGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIR---GPQIMKGYLNDPEGTAATIDVE 788 + DD + F+SGTT PKGVV+TH +L + L + DV L V+P FHI + + + AGA +L++K+ A +Q++R + P A+ +R V+ L + +DA R +L YGMTE G + + P ++G C AE++ + LP + GEICI+ G I K Y +P+ TA ++ + Sbjct: 170 LSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSA----WQCALRDDDVYLTVMPAFHIDCQCTAAMAAFSAGATFVLVEKYSARAFWGQVQKYRATITECIPMMIRTLMVQPPSANDQQHRLREVMF-YLNLSAQEKDAFCERFGVRLL-TSYGMTETIVGIIGDRPGDKRRWPSIGRAGFC----YEAEIR---DDHNRPLPAGEIGEICIKGVPGKTIFKEYFLNPKATAKVLEAD 397
BLAST of FC873818 vs. ExPASy Swiss-Prot
Match: CAIC_SHIDS (Probable crotonobetaine/carnitine-CoA ligase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=caiC PE=3 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 6.015e-11 Identity = 66/241 (27.39%), Postives = 109/241 (45.23%), Query Frame = 3 Query: 81 IKPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEA-GPVLSMCLGFAKQ-PFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIR---GPQIMKGYLNDPEGTAATIDVE 788 + DD + F+SGTT PKGVV+TH +L + L + +V L V+P FHI + + + AGA +L++K+ A +Q++R + P A+ +R V+ L ++ +DA R +L YGMTE ++ LG ++ P ++G C AE++ + LP + GEICI+ G I K Y +P+ TA ++ + Sbjct: 170 LSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSA----WQCALRDDEVYLTVMPAFHIDCQCTAAMAAFSAGATFVLVEKYSARAFWGQVQKYRATITECIPMIIRTLMVQPPSANDRQHRLREVMF-YLNLSEQEKDAFCERFGVRLL-TSYGMTETIVGIIGDRLGDKRRWPSIGRAGFC----YEAEIR---DDHNRPLPAGEIGEICIKGVLGKTIFKEYFLNPKATAKVLEAD 397
BLAST of FC873818 vs. ExPASy Swiss-Prot
Match: CAIC_ECOSE (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli (strain SE11) GN=caiC PE=3 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 6.015e-11 Identity = 66/238 (27.73%), Postives = 105/238 (44.12%), Query Frame = 3 Query: 90 DDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTE--AGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIR---GPQIMKGYLNDPEGTAATIDVE 788 DD + F+SGTT PKGVV+TH +L + L + DV L V+P FHI + + + AGA +L++K+ A +Q++R + P A+ +R V+ L ++ +DA R +L YGMTE G + + P ++G C AE++ + LP + GEICI+ G I K Y +P+ TA ++ + Sbjct: 173 DDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSA----WQCALRDDDVYLTVMPAFHIDCQCTAAMAAFSAGATFVLVEKYSARAFWGQVQKYRATITECIPMMIRTLMVQPPSANDRQHRLREVMF-YLNLSEQEKDAFCERFGVRLL-TSYGMTETIVGIIGDRPGDKRRWPSIGRAGFC----YEAEIR---DDHNRPLPAGEIGEICIKGVPGKTIFKEYFLNPKATAKVLEAD 397
BLAST of FC873818 vs. ExPASy Swiss-Prot
Match: CAIC_CITK8 (Probable crotonobetaine/carnitine-CoA ligase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=caiC PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.856e-11 Identity = 75/270 (27.78%), Postives = 116/270 (42.96%), Query Frame = 3 Query: 6 DAPPE-NCLHFTVLSEADEDQIPEVA-----IKPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTE--AGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIR---GPQIMKGYLNDPEGTAATID 782 +AP E N HF+ L +DQ P + DD + F+SGTT PKGVV+TH +L + + L DV L V+P FHI + + + AG+ +L++K+ A ++++R + P + +R V+ L + +DA +R +L YGMTE G + + P + G C A+++ E SLP + GEICI+ G I K Y PE TA ++ Sbjct: 143 NAPVEDNVSHFSQL----KDQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYY----SSWQCALREDDVYLTVMPAFHIDCQCTAAMAAFSAGSTFVLIEKYSARAFWGQVRKYRATVTECIPMMIRTLMVQPASPEERQHCLREVMF-YLNLSVQEKDAFIARFGVRLL-TSYGMTETIVGIIGDRPGDKRRWPSIGRPGFC----YEADIR---DEQNRSLPAGEIGEICIKGVPGKTIFKEYYARPEATAKALE 395 The following BLAST results are available for this feature:
BLAST of FC873818 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 180
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873818 ID=FC873818; Name=FC873818; organism=Citrus clementina; type=EST; length=788bpback to top |