FC873818
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873818 vs. ExPASy Swiss-Prot
Match: ACSF2_MACFA (Acyl-CoA synthetase family member 2, mitochondrial OS=Macaca fascicularis GN=ACSF2 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.292e-21 Identity = 67/233 (28.76%), Postives = 111/233 (47.64%), Query Frame = 3 Query: 93 DPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLP--LFH-IYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMKGYLNDPEGTAATID 782 DP+ + F+SGTTG PKG L+H +++ + + GE L+ + + +LP L+H + S+ ++C + +L F LE I R R S P + YD+S++R + +P EL A+ +++ L YG TE PV F + K+ S G ++ + E ++++ E G N PGE+CIRG +M GY +P+ T +D Sbjct: 259 DPINIQFTSGTTGSPKGATLSHYNIVNN--SSILGERLKLHEKTPEQLRMILPSPLYHCLGSVGGTMMCLMYGATLILASPVFNGKKALEAISRERGSFLYGTPTMFVDILNQPDFSSYDISTMRGGVIAGSPAPPELIRAIINKINMKDLVVAYGTTENSPVTFA--NFPEDTVEQKAESVGRIMPHTEARIMNMEAGMLAELNTPGELCIRGYCVMLGYWGEPQKTGEAVD 487
BLAST of FC873818 vs. ExPASy Swiss-Prot
Match: ACSF2_BOVIN (Acyl-CoA synthetase family member 2, mitochondrial OS=Bos taurus GN=ACSF2 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.412e-21 Identity = 71/232 (30.60%), Postives = 109/232 (46.98%), Query Frame = 3 Query: 93 DPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLP--LFHIYSLNSVLLCSLRAGAGVLLMQK-FEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMKGYLNDPEGTAATI 779 DP+ + F+SGTTG PKG L+H +++ + + G+ L+ + VLP L+H + SL G ++L FE LE I R R P + YD+S++R + +P EL A+ +++ L YG TE PV M F + K+ S G V+ + E ++++ ETG N PGE+CIRG +M GY +P+ T I Sbjct: 256 DPINIQFTSGTTGSPKGATLSHYNIVNNA--NMIGQRLRLHQKTPEESRVVLPSPLYHCLGSVGGTMVSLMHGVTLILCSPVFEGKKTLEAISRERGCFLYGTPTMFVDVLNQPDFSSYDISTMRGGVIAGSPAPPELIRAIINKLNMKELVVAYGTTENSPVTFM--NFTEDTVEQKAESVGRVMPHTEAQIVNTETGTLTELNTPGELCIRGYCVMLGYWGEPQKTEEAI 483
BLAST of FC873818 vs. ExPASy Swiss-Prot
Match: ACSF2_RAT (Acyl-CoA synthetase family member 2, mitochondrial OS=Rattus norvegicus GN=Acsf2 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.428e-20 Identity = 72/234 (30.77%), Postives = 113/234 (48.29%), Query Frame = 3 Query: 93 DPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLP--LFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSIR--VVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMKGYLNDPEGTAATI 779 DP+ + F+SGTTG PKG L+H +++ + + G+ + + + VLP L+H + S+ GA +LL F LE I R + + P + YD ++IR V+ AP EL A+ S++ L YG TE PV M F + K+GS G ++ + E ++++ ETG N PGE+CIRG +M+GY +P+ T T+ Sbjct: 256 DPINIQFTSGTTGNPKGATLSHHNIVNN--SNLIGQRLKMPAKTAEELRMVLPCPLYHCLGSVGGTMVSVVHGATLLLSSPSFNGKKALEAISREKGTLLYGTPTMFVDILNQPDFSSYDFTTIRGGVIAGSLAP--PELIRAIISKMNMKELVVVYGTTENSPVTFM--NFPEDTLEQKAGSVGRIMPHTEAQIVNMETGELTKLNMPGELCIRGYCVMQGYWGEPQKTFETV 483
BLAST of FC873818 vs. ExPASy Swiss-Prot
Match: ACSF2_MOUSE (Acyl-CoA synthetase family member 2, mitochondrial OS=Mus musculus GN=Acsf2 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.182e-20 Identity = 69/232 (29.74%), Postives = 111/232 (47.84%), Query Frame = 3 Query: 93 DPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLP--LFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMKGYLNDPEGTAATI 779 DP+ + F+SGTTG PKG L+H +++ + + G+ + + + VLP L+H + S+ GA +LL F LE I R + + P + YD +SIR + +P EL A+ +++ L YG TE PV M F + K+GS G ++ + E ++++ ETG N PGE+ IRG +M+GY +P+ T T+ Sbjct: 256 DPINIQFTSGTTGNPKGATLSHHNIVNN--SMLIGQRLKMPTKTAEELRLVLPSPLYHCLGSVGGTMVSMMHGATLLLSSPSFNGKKALEAISREKGTLLYGTPTMFVDILNQPDFSSYDFTSIRGGVIAGSPAPPELIRAIINKMNMKELVVVYGTTENSPVTFM--NFPEDTLEQKAGSVGRIMPHTEAQIVNVETGELTNLNVPGELYIRGYCVMQGYWGEPQKTFETV 483
BLAST of FC873818 vs. ExPASy Swiss-Prot
Match: LCFA_YERPE (Long-chain-fatty-acid--CoA ligase OS=Yersinia pestis GN=fadD PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.428e-20 Identity = 67/237 (28.27%), Postives = 121/237 (51.05%), Query Frame = 3 Query: 81 IKPD----DPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSL--NSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTK--SGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMKGYLNDPEGT 767 +KPD D L ++ GTTG+ KG +LTH+++ +++ Q P L D+V+ LPL+HI++L N +L L G +L+ +I +++ + R+ + N D S++R+ + G P+ K + + + + +L +GYG+TE P+++ P+ K SGS G V + ++++ D + G + +PGE+ +RGPQ+M GY P+ T Sbjct: 199 VKPDVINTDTAFLQYTGGTTGVAKGAILTHRNMQSNLEQAKAAYAP-LLQPGRDLVVTALPLYHIFALTVNCLLFIEL-GGRSLLITNPRDIPGMVKELSRYPFTAITGVNTLFNALLNNEEFTHLDFSTLRLSVGGGMPVQKAVAEKWETLTGKHLL-EGYGLTECSPLVT------GNPYDLKHYSGSIGLPVPSTDVRLRD-DDGNDVELGKPGELWVRGPQVMLGYWQRPDAT 425
BLAST of FC873818 vs. ExPASy Swiss-Prot
Match: ACSF2_HUMAN (Acyl-CoA synthetase family member 2, mitochondrial OS=Homo sapiens GN=ACSF2 PE=1 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 5.428e-20 Identity = 67/246 (27.24%), Postives = 115/246 (46.75%), Query Frame = 3 Query: 54 DEDQIPEVAIKPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLP--LFH-IYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMKGYLNDPEGTAATID 782 D+ Q + + DP+ + F+SGTTG PKG L+H +++ + + GE L+ + + +LP L+H + S+ ++C + +L F LE I R R + P + YD+S++ + +P EL A+ +++ L YG TE PV F + K+ S G ++ + E ++++ E G N PGE+CIRG +M GY +P+ T +D Sbjct: 243 DQLQYNQQFLSCHDPINIQFTSGTTGSPKGATLSHYNIVNN--SNILGERLKLHEKTPEQLRMILPNPLYHCLGSVAGTMMCLMYGATLILASPIFNGKKALEAISRERGTFLYGTPTMFVDILNQPDFSSYDISTMCGGVIAGSPAPPELIRAIINKINMKDLVVAYGTTENSPVTFA--HFPEDTVEQKAESVGRIMPHTEARIMNMEAGTLAKLNTPGELCIRGYCVMLGYWGEPQKTEEAVD 484
BLAST of FC873818 vs. ExPASy Swiss-Prot
Match: ACSF2_PONAB (Acyl-CoA synthetase family member 2, mitochondrial OS=Pongo abelii GN=ACSF2 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 9.258e-20 Identity = 67/246 (27.24%), Postives = 114/246 (46.34%), Query Frame = 3 Query: 54 DEDQIPEVAIKPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLP--LFH-IYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMKGYLNDPEGTAATID 782 D+ Q + + DP+ + F+SGTTG PKG L+H +++ + + GE L+ + + +LP L+H + S+ ++C + +L F LE I R R S P + YD+S++ + +P EL A+ +++ L YG E PV F + K+ S G ++ + E ++++ E G N PGE+CIRG +M GY +P+ T +D Sbjct: 243 DQLQYNQQFLSCHDPINIQFTSGTTGSPKGATLSHYNIVNN--SNMLGERLKLHEKTPEQLRMILPSPLYHCLGSVGGTMMCLMYGATLILASPVFNGKKALEAISRERGSFLYGTPTMFVDILNQPDFSSYDISTMCGGVIAGSPAPPELIRAIINKINMKDLVVAYGTPENSPVTFA--HFPEDTVEQKAESVGRIMPHTEARIMNMEAGTLAELNTPGELCIRGYCVMLGYWGEPQKTEEAVD 484
BLAST of FC873818 vs. ExPASy Swiss-Prot
Match: 4CLL7_ORYSJ (4-coumarate--CoA ligase-like 7 OS=Oryza sativa subsp. japonica GN=4CLL7 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.579e-19 Identity = 77/265 (29.06%), Postives = 109/265 (41.13%), Query Frame = 3 Query: 3 IDAPPENCLHFTVLSEADEDQIPEVAIKPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLL---MQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMKGYLNDPEGTAATIDVE 788 +D+P L ++ +P V ++ + A+ +SSGTTG K L H+S I VA G + L P+FH VL V++ + + I L+E +R V K L ++ + G APL + R R P L GYG TEAG + M Q GS G V N E+K++D TG LP Q GE+ +RGP +M GY+ D E A T + E Sbjct: 175 LDSPHFRSLLMDCGQAQGQEPLPVVVVRQSETAAIQYSSGTTGRVKAAALPHRSFIAMVA----GFHALRAKAREVRTLLGAPMFHSMGFLFVLQGVALGATTVVVTDAVARAGIRGLVEAAERWAVMDMTASPPVVLGMTKQRC----RLPALERITCGGAPLPAPAIERFRRRFPHVDLCMGYGSTEAGGISRMI----SQEECNHIGSAGRVTENVEVKIVDHVTGKPLPAGQQGELWVRGPAVMTGYVGDNEANATTFNSE 427
BLAST of FC873818 vs. ExPASy Swiss-Prot
Match: LCFA_SALTY (Long-chain-fatty-acid--CoA ligase OS=Salmonella typhimurium GN=fadD PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.063e-19 Identity = 66/235 (28.09%), Postives = 115/235 (48.94%), Query Frame = 3 Query: 69 PEVAIKPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSL--NSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMKGYLNDPEGT 767 PEV +D L ++ GTTG+ KG +LTH++++ ++ Q P L+ ++V+ LPL+HI++L N +L L G +L+ +I L++ + ++ + N D SS+ + G P+ + + Q +L +GYG+TE P++S+ SGS G V + E K++D + P + GE+C++GPQ+M GY P+ T Sbjct: 201 PEVVA--EDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQVKATYGPLLH-PGKELVVTALPLYHIFALTMNCLLFIEL-GGQNLLITNPRDIPGLVKELAKYPFTAMTGVNTLFNALLNNKEFQQLDFSSLHLSAGGGMPVQNVVAERWVKLTGQYLL-EGYGLTECAPLVSV----NPHDIDYHSGSIGLPVPSTEAKLVDDDDNEVAP-GEAGELCVKGPQVMLGYWQRPDAT 425
BLAST of FC873818 vs. ExPASy Swiss-Prot
Match: LCFA_SALTI (Long-chain-fatty-acid--CoA ligase OS=Salmonella typhi GN=fadD PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.063e-19 Identity = 66/235 (28.09%), Postives = 115/235 (48.94%), Query Frame = 3 Query: 69 PEVAIKPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSL--NSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMKGYLNDPEGT 767 PEV +D L ++ GTTG+ KG +LTH++++ ++ Q P L+ ++V+ LPL+HI++L N +L L G +L+ +I L++ + ++ + N D SS+ + G P+ + + Q +L +GYG+TE P++S+ SGS G V + E K++D + P + GE+C++GPQ+M GY P+ T Sbjct: 201 PEVVA--EDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQVKATYGPLLH-PGKELVVTALPLYHIFALTMNCLLFIEL-GGQNLLITNPRDIPGLVKELAKYPFTAMTGVNTLFNALLNNKEFQQLDFSSLHLSAGGGMPVQNVVAERWVKLTGQYLL-EGYGLTECAPLVSV----NPHDIDYHSGSIGLPVPSTEAKLVDDDDNEVAP-GEAGELCVKGPQVMLGYWQRPDAT 425 The following BLAST results are available for this feature:
BLAST of FC873818 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 180
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873818 ID=FC873818; Name=FC873818; organism=Citrus clementina; type=EST; length=788bpback to top |