FC873825

Overview
NameFC873825
Unique NameFC873825
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length785
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14971 contig Ccv1_Contig14971:185..969. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873825 vs. ExPASy Swiss-Prot
Match: LVR_LEIAQ (Levodione reductase OS=Leifsonia aquatica GN=lvr PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.522e-22
Identity = 65/195 (33.33%), Postives = 104/195 (53.33%), Query Frame = 2
Query:   50 DVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGA-NKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDED-----LEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGG 616
            DV++E+ ++  +  T    G++D  FNNAGI G  N T       A+F++V+S+N+ GVFLG++   ++M    SG ++                Y  AKH V+GLT+N+AVE G++GIR+N ++P A+ TP+  + +   D +      E F+    N         +IA    +L SD+A YV+   + IDGG
Sbjct:   72 DVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFT--AAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQ--VNPSKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGG 262          
BLAST of FC873825 vs. ExPASy Swiss-Prot
Match: YGCW_ECOLI (Uncharacterized oxidoreductase ygcW OS=Escherichia coli (strain K12) GN=ygcW PE=3 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.853e-20
Identity = 63/196 (32.14%), Postives = 100/196 (51.02%), Query Frame = 2
Query:   38 YVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGGFTI 625
            ++   +T E   +  I       G +DI+ NNAGI   NK  ++D  +AD++ ++ VN+T  F     AA++MIP +SG I+                Y   KHA+ G TK    ELGQ+ I+VN ++P   AT +  +     + +     +  AN  G    T+D+  AA++LAS  + YV+GH L +DGG+ +
Sbjct:   70 FMQVGITAEGAPQKIIAACCERFGTVDILVNNAGICKLNK--VLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWG---DTQDLMGAAVFLASPASNYVNGHLLVVDGGYLV 260          
BLAST of FC873825 vs. ExPASy Swiss-Prot
Match: FABG_CHLPN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Chlamydia pneumoniae GN=fabG PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.195e-20
Identity = 63/205 (30.73%), Postives = 99/205 (48.29%), Query Frame = 2
Query:   35 SYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRT---------EDIAYAALYLASDEAKYVSGHNLFIDGGFT 622
            S+   DV++   +K+ + + +  H K+DI+ NNAGI   N   ++   + D++ V+S N+T ++       R MI ARSGSI+                Y  AK  ++  TK+ A E+    IRVNCL+P            G  + D+   +N   NLK   L++         ED+A  AL+LAS  + Y++   L +DGG T
Sbjct:   59 SFARVDVSHNGGVKDCVQKFLDKHNKIDILVNNAGITRDN--LLMRMSEDDWQSVISTNLTSLYYTCSSVIRHMIKARSGSIINVASIVAKIGSAGQTNYAAAKAGIIAFTKSLAKEVAARNIRVNCLAP------------GFIETDMTSVLND--NLKAEWLKSIPLGRAGTPEDVARVALFLASQLSSYMTAQTLVVDGGLT 247          
BLAST of FC873825 vs. ExPASy Swiss-Prot
Match: YXBG_BACSU (Uncharacterized oxidoreductase yxbG OS=Bacillus subtilis GN=yxbG PE=3 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 5.960e-19
Identity = 64/197 (32.49%), Postives = 102/197 (51.78%), Query Frame = 2
Query:   44 HCDVTNESHIKNAIDQTVATHGKLDIMFNNAGI---GGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDL-EGF--MNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGG 616
            H DV++E+ +K   DQ     G +DI+FNNAG+   GG      +D     F+R+++V++ G FL  K+   +M+    GSI+                Y  AK  +  LTK  A++  + GIRVN +SP  + TPL     G  ++++ E F   N      G   + +++A  AL+LASD++ YV+G ++  DGG
Sbjct:   61 HLDVSDENSVKAFADQIKDACGTIDILFNNAGVDQEGGKVHEYPVDL----FDRIIAVDLRGTFLCSKYLIPLMLE-NGGSIINTSSMSGRAADLDRSGYNAAKGGITNLTKAMAIDYARNGIRVNSISPGTIETPLIDKLAGTKEQEMGEQFREANKWITPLGRLGQPKEMATVALFLASDDSSYVTGEDITADGG 252          
BLAST of FC873825 vs. ExPASy Swiss-Prot
Match: FABG_THEMA (3-oxoacyl-[acyl-carrier-protein] reductase OS=Thermotoga maritima GN=fabG PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.017e-18
Identity = 59/192 (30.73%), Postives = 100/192 (52.08%), Query Frame = 2
Query:   50 DVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGGFTI 625
            +VT+   IK  +++ V  +G++D++ NNAGI       ++  ++ D++ V++VN+ GVF   +     MI  R+GSI+                Y  +K  V+G+TK  A EL    IRVN ++P  + TP+      + ++  E  ++      G   + E++A   L+LASDE+ YV+G  + IDGG  I
Sbjct:   62 NVTDRDQIKEVVEKVVQKYGRIDVLVNNAGI--TRDALLVRMKEEDWDAVINVNLKGVFNVTQMVVPYMIKQRNGSIVNVSSVVGIYGNPGQTNYAASKAGVIGMTKTWAKELAGRNIRVNAVAPGFIETPMTEK---LPEKARETALSRIP--LGRFGKPEEVAQVILFLASDESSYVTGQVIGIDGGLVI 246          
BLAST of FC873825 vs. ExPASy Swiss-Prot
Match: DHG2_BACSU (Glucose 1-dehydrogenase 2 OS=Bacillus subtilis GN=ycdF PE=1 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 2.265e-18
Identity = 62/200 (31.00%), Postives = 98/200 (49.00%), Query Frame = 2
Query:   41 VHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPAR-SGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRT----EDIAYAALYLASDEAKYVSGHNLFIDGGFTI 625
            V  DV+ E  I+  +D  +   G LD+M NN+G  G  +    +    D++RV+ VNVTG FLG K A   M+     G++L                Y  +K  +  +T+  A+     GIRVN ++P  +AT         ++ D +   +    LK + ++     E++A AA +L S+EA YV+G  LF+DGG T+
Sbjct:   62 VEADVSKEEGIQALLDTALEHFGTLDVMVNNSGFNGV-EAMPHEMSLEDWQRVIDVNVTGTFLGAKAALNHMMKNNIKGNVLNISSVHQQIPRPVNVQYSTSKGGIKMMTETLALNYADKGIRVNAIAPGTIATE--------SNVDTKKEESRQKQLKKIPMKAFGKPEEVAAAAAWLVSEEASYVTGATLFVDGGMTL 252          
BLAST of FC873825 vs. ExPASy Swiss-Prot
Match: BACC_BACAM (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus amyloliquefaciens GN=bacC PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.265e-18
Identity = 66/199 (33.17%), Postives = 100/199 (50.25%), Query Frame = 2
Query:   38 YVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVE-LGQFGIRVNCLSPYALATPL-ATSFVGITDEDLEGFMNSAANLKGVTL--RTEDIAYAALYLASDEAKYVSGHNLFIDGGFT 622
            +V  D+TNE   +NAI   V   G LD++ NNAGI       I + E +D+ +VL+VN+TG+FL  KHA + M+ +  G+I+                Y  +K  VL          + +  IRVNC+ P  + TPL   SF+   +  LE      A +  +    + E+IA   L+LASD + Y++G  +  DGG+T
Sbjct:   56 FVQTDITNEPACQNAILSAVDKFGGLDVLINNAGIEIV--APIHEMELSDWNKVLNVNLTGMFLMSKHALKYMLKSGKGNIINTCSVGGVVAWPDIPAYNASKGGVLQTDAFYRPSIIAKHNIRVNCVCPGIIDTPLNEKSFLENNEGTLEEIKKEKAKVNPLLRLGKPEEIANVMLFLASDLSSYMTGSAITADGGYT 252          
BLAST of FC873825 vs. ExPASy Swiss-Prot
Match: YOHF_ECOLI (Uncharacterized oxidoreductase yohF OS=Escherichia coli (strain K12) GN=yohF PE=3 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.958e-18
Identity = 62/199 (31.16%), Postives = 102/199 (51.26%), Query Frame = 2
Query:   41 VHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIP-ARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGGFTIVNP 634
            V  D+ N      A+++ +   G++D++ NNAG     K   +D    ++ ++ +V+V G FL  + AAR M+   + G I+                Y  AKHA+ GLTK  A+EL +  I VN ++P A+ATP+     G+ D D++     +  L+     T +IA   ++L S+ A Y +G +L +DGGF + NP
Sbjct:   57 VQLDLGNLPEGALALEKLIQRLGRIDVLVNNAG--AMTKAPFLDMAFDEWRKIFTVDVDGAFLCSQIAARQMVKQGQGGRIINITSVHEHTPLPDASAYTAAKHALGGLTKAMALELVRHKILVNAVAPGAIATPMN----GMDDSDVKPDAEPSIPLRRFG-ATHEIASLVVWLCSEGANYTTGQSLIVDGGFMLANP 248          
BLAST of FC873825 vs. ExPASy Swiss-Prot
Match: Y325_THEMA (Uncharacterized oxidoreductase TM_0325 OS=Thermotoga maritima GN=TM_0325 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.958e-18
Identity = 67/210 (31.90%), Postives = 110/210 (52.38%), Query Frame = 2
Query:    5 VVESIGTSNSSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATP--LATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGGFTIV 628
            +++S+G   ++++  DV  ++  +  + +TV T G+LDI+ NNAGI       I +  + DF++ ++VNV G FL  K+A   M     G I+                Y  +K A+LGLT++ AV+   +GIRVN + P    +   +A        E+L   M S   +K +  + E+IA+A L+ A DEA +++G  + IDGG T V
Sbjct:   48 LIKSMG-GEAAFIFGDVAKDA--EQIVKKTVETFGRLDILVNNAGI--VPYGNIEETSEEDFDKTMAVNVKGPFLLSKYAVEQMKKQGGGVIVNVSSEAGLIGIPRRCVYSVSKAALLGLTRSLAVDYVDYGIRVNAVCPGTTQSEGLMARVKASPNPEELLKKMTSRIPMKRLG-KEEEIAFAILFAACDEAGFMTGSIINIDGGSTAV 251          
BLAST of FC873825 vs. ExPASy Swiss-Prot
Match: BDH2_MOUSE (3-hydroxybutyrate dehydrogenase type 2 OS=Mus musculus GN=Bdh2 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.863e-18
Identity = 62/188 (32.98%), Postives = 98/188 (52.13%), Query Frame = 2
Query:   74 KNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXX-YCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITD---EDLEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGGFTI 625
            K  IDQ  +   ++D++FN AG    +   I+D E+ D++  +++NV  +FL IK     M+  +SG+I+                 Y   K AV+GLTK+ A +  Q GIR NC+ P  + TP     +   D   E L+ F+N      G     E++A   +YLASDE+ YV+G+ + IDGG+++
Sbjct:   62 KRQIDQFASEIERIDVLFNVAGF--VHHGTILDCEEKDWDFSMNLNVRSMFLMIKAFLPKMLAQKSGNIINMSSVASSIKGVENRCVYSATKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARDNPKEALKTFLNRQKT--GRFASAEEVALLCVYLASDESAYVTGNPVIIDGGWSL 245          
The following BLAST results are available for this feature:
BLAST of FC873825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
LVR_LEIAQ7.522e-2233.33Levodione reductase OS=Leifsonia aquatica GN=lvr P... [more]
YGCW_ECOLI1.853e-2032.14Uncharacterized oxidoreductase ygcW OS=Escherichia... [more]
FABG_CHLPN9.195e-2030.733-oxoacyl-[acyl-carrier-protein] reductase OS=Chla... [more]
YXBG_BACSU5.960e-1932.49Uncharacterized oxidoreductase yxbG OS=Bacillus su... [more]
FABG_THEMA1.017e-1830.733-oxoacyl-[acyl-carrier-protein] reductase OS=Ther... [more]
DHG2_BACSU2.265e-1831.00Glucose 1-dehydrogenase 2 OS=Bacillus subtilis GN=... [more]
BACC_BACAM2.265e-1833.17Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]
YOHF_ECOLI2.958e-1831.16Uncharacterized oxidoreductase yohF OS=Escherichia... [more]
Y325_THEMA2.958e-1831.90Uncharacterized oxidoreductase TM_0325 OS=Thermoto... [more]
BDH2_MOUSE3.863e-1832.983-hydroxybutyrate dehydrogenase type 2 OS=Mus musc... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3DD06FM1 AbsDev Citrus clementina cDNA clone KN0AAI3DD06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873825 ID=FC873825; Name=FC873825; organism=Citrus clementina; type=EST; length=785bp
TTCAGTTGTTGAATCCATAGGCACATCAAACTCATCCTATGTCCATTGCG
ATGTCACAAACGAATCCCACATTAAAAATGCAATCGACCAAACCGTTGCA
ACTCATGGCAAGCTGGACATAATGTTCAACAACGCCGGCATAGGCGGCGC
TAACAAGACCCGCATAATCGACAATGAAAAGGCCGATTTCGAGCGTGTCC
TGAGTGTAAATGTCACCGGAGTTTTCTTGGGCATCAAGCATGCTGCTCGT
GTCATGATTCCGGCTCGCAGTGGCAGCATTCTTTCAACTGCTAGCGTTAG
CTCAAGGGTTGGTGCTGCTGCCTCACATGCATACTGTTGTGCAAAACATG
CTGTTTTAGGACTCACCAAAAATGCTGCTGTTGAGCTAGGCCAATTTGGG
ATTAGGGTGAATTGCTTGTCACCTTATGCTCTTGCAACACCTTTGGCTAC
CAGTTTTGTTGGGATTACCGATGAGGATCTGGAAGGTTTTATGAATTCAG
CGGCTAACCTTAAGGGTGTGACTTTAAGGACCGAAGATATTGCATATGCA
GCTCTTTATCTAGCGAGTGATGAGGCGAAGTATGTGAGTGGACACAATCT
TTTCATTGACGGAGGTTTCACTATTGTCAATCCCTCCCTCGGAATGTTTC
AGTACCCAGATTCTTGATCGAGTTAGTTAATTTCATCAAGGTTTTTTCCC
ATTTGAGTGGGGAAAAAAAAAACTCTGTTCAAATAATTTCATATTTGATC
CTTGATATCGAATGAAACAAAATTGAACAAGTTTT
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