FC873825

Overview
NameFC873825
Unique NameFC873825
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length785
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14971 contig Ccv1_Contig14971:185..969. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873825 vs. ExPASy Swiss-Prot
Match: FABG_RICCN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Rickettsia conorii GN=fabG PE=3 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 2.344e-15
Identity = 52/194 (26.80%), Postives = 96/194 (49.48%), Query Frame = 2
Query:   47 CDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGGFTIV 628
            C++ ++   +N I +      KLDI+  NAGI   + T  I  +  DF++V+ +N+   F+  + A + MI  R G I+                YC +K  ++G+TK+ + E+   GI VN ++P  + + +      + ++  E  +       G     ED+A+A  +LASD+A Y++G  + ++GG  +V
Sbjct:   59 CNLADKEECRNLISKA----SKLDILVCNAGI--TSDTLAIRMKDEDFDKVIDINLKANFILNREAIKKMIQNRYGRIINISSIVGISGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNTVAPGFIKSDMTDK---LNEKQREAIVQKIP--LGTYGMPEDVAHAVAFLASDQASYITGQTIHVNGGMLMV 241          
BLAST of FC873825 vs. ExPASy Swiss-Prot
Match: DHGB_BACME (Glucose 1-dehydrogenase B OS=Bacillus megaterium GN=gdhB PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 2.344e-15
Identity = 61/193 (31.61%), Postives = 90/193 (46.63%), Query Frame = 2
Query:   50 DVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMI--PARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGGFT 622
            DVT ES + N +   +   GKLD+M NNAG+   N     +   +D+ +V+  N+TG FLG + A +  +    +   I                 Y  +K  +  +T+  A+E    GIRVN + P A+ TP+        D +    + S   + G     E+IA A  +LAS EA YV+G  LF DGG T
Sbjct:   66 DVTVESDVINLVQSAIKEFGKLDVMINNAGM--ENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEWKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAE--KFADPEQRADVESMIPM-GYIGEPEEIA-AVAWLASSEASYVTGITLFADGGMT 252          
BLAST of FC873825 vs. ExPASy Swiss-Prot
Match: FABG_RICTY (3-oxoacyl-[acyl-carrier-protein] reductase OS=Rickettsia typhi GN=fabG PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.998e-15
Identity = 57/201 (28.36%), Postives = 95/201 (47.26%), Query Frame = 2
Query:   47 CDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSA---ANLKGVTLRT----EDIAYAALYLASDEAKYVSGHNLFIDGGFTIV 628
            C++ N+    N I +       LDI+  NAGI   + T  I  +  DF++V+ +N+   F+  + A + MI  R G I+                YC +K  ++G+TK+ + E+   GI VN ++P            G    D+   +N     A ++ + L T    ED+AYA  +LAS+ A Y++G  L ++GG  +V
Sbjct:   59 CNLANKEECNNLISKI----SNLDILVCNAGI--TSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAP------------GFIKSDMTDKLNEKQREAIVQKIPLGTYGIPEDVAYAVAFLASNHASYITGQTLHVNGGMLMV 241          
BLAST of FC873825 vs. ExPASy Swiss-Prot
Match: FABG_BUCBP (3-oxoacyl-[acyl-carrier-protein] reductase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=fabG PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.998e-15
Identity = 52/197 (26.40%), Postives = 97/197 (49.24%), Query Frame = 2
Query:   26 SNSSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGG 616
            +N   +  D+TN + I   +D      G++DI+ NNAGI       +I+ +  D+  VL+VN+  +F   K   R MI  + G I+                Y  AK  ++G  K+ A+EL   GI VN ++P  + T +  +   ++ + L  +++     +  T++  +I+   L+L S++A Y++G  + ++GG
Sbjct:   52 NNGIGIKLDITNPNEITKTMDFVYKNFGRVDILINNAGI--IRDKLLINMKTQDWNSVLNVNLNSIFYMSKSVIRNMIKNKQGKIITIGSVIAHIGNCGQTNYSAAKLGLVGFHKSLALELAPKGITVNMIAPGLIKTGMTNN---LSQKQLSKYLSKIPMKRLGTIK--EISKITLFLISNDANYITGQVIHVNGG 241          
BLAST of FC873825 vs. ExPASy Swiss-Prot
Match: GNO_GLUOX (Gluconate 5-dehydrogenase OS=Gluconobacter oxydans GN=gno PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.222e-15
Identity = 55/192 (28.65%), Postives = 93/192 (48.44%), Query Frame = 2
Query:   50 DVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGGFTI 625
            DVT++  + + +       G +DI+ NNAGI    +  + +  + D++ ++S NV  VF   +  AR MIP   G I+                Y   K AV  LTK  A + G+ G+++N L+P   AT +    V   DE+   ++       G   + E++  AA++L+S  + +V+G  L +DGG T+
Sbjct:   68 DVTDQDAVIDGVAAIERDMGPIDILINNAGI--QRRAPLEEFSRKDWDDLMSTNVNAVFFVGQAVARHMIPRGRGKIVNICSVQSELARPGIAPYTATKGAVKNLTKGMATDWGRHGLQINGLAPGYFATEMTERLV--ADEEFTDWL-CKRTPAGRWGQVEELVGAAVFLSSRASSFVNGQVLMVDGGITV 254          
BLAST of FC873825 vs. ExPASy Swiss-Prot
Match: BAIA2_EUBSP (Bile acid 7-dehydroxylase 2 OS=Eubacterium sp. (strain VPI 12708) GN=baiA2 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.222e-15
Identity = 56/190 (29.47%), Postives = 93/190 (48.95%), Query Frame = 2
Query:   50 DVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGGF 619
            D+T+   +  A+ Q    +G+LD+M NNAGI   N    +  E  +F+ ++ +NVTGVF G   A + M  A+ G I+                Y  +K +V+GLT     E+ +  IRV  ++P  + T +     G   E +EG++ +    +   L  E+IA   L+LASD A  ++   + +DG +
Sbjct:   65 DLTSRDAVMAAVGQVAQKYGRLDVMINNAGITSNNVFSRVSEE--EFKHIMDINVTGVFNGAWCAYQCMKDAKKGVIINTASVTGIFGSLSGVGYPASKASVIGLTHGLGREIIRKNIRVVGVAPGVVNTDMTN---GNPPEIMEGYLKALPMKR--MLEPEEIANVYLFLASDLASGITATTVSVDGAY 247          
BLAST of FC873825 vs. ExPASy Swiss-Prot
Match: HDHA_ECOLI (7-alpha-hydroxysteroid dehydrogenase OS=Escherichia coli (strain K12) GN=hdhA PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.820e-15
Identity = 61/190 (32.11%), Postives = 89/190 (46.84%), Query Frame = 2
Query:   47 CDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGG 616
            CD+T+E  +    D  ++  GK+DI+ NNAG GG    +  D   ADF R   +NV   F   +  A  M     G IL                Y  +K A   L +N A +LG+  IRVN ++P A+ T    S   +   ++E  M     ++ +  + +DIA AAL+L S  A +VSG  L + GG
Sbjct:   67 CDITSEQELSALADFAISKLGKVDILVNNAGGGG---PKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKS---VITPEIEQKMLQHTPIRRLG-QPQDIANAALFLCSPAASWVSGQILTVSGG 249          
BLAST of FC873825 vs. ExPASy Swiss-Prot
Match: HDHA_ECO57 (7-alpha-hydroxysteroid dehydrogenase OS=Escherichia coli O157:H7 GN=hdhA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.820e-15
Identity = 61/190 (32.11%), Postives = 89/190 (46.84%), Query Frame = 2
Query:   47 CDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGG 616
            CD+T+E  +    D  ++  GK+DI+ NNAG GG    +  D   ADF R   +NV   F   +  A  M     G IL                Y  +K A   L +N A +LG+  IRVN ++P A+ T    S   +   ++E  M     ++ +  + +DIA AAL+L S  A +VSG  L + GG
Sbjct:   67 CDITSEQELSALADFAISKLGKVDILVNNAGGGG---PKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKS---VITPEIEQKMLQHTPIRRLG-QPQDIANAALFLCSPAASWVSGQILTVSGG 249          
BLAST of FC873825 vs. ExPASy Swiss-Prot
Match: FABG3_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 3, chloroplastic OS=Brassica napus GN=bkr3 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.820e-15
Identity = 58/193 (30.05%), Postives = 93/193 (48.19%), Query Frame = 2
Query:   50 DVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLA-SDEAKYVSGHNLFIDGGFTI 625
            DV+ E+ ++  +   +   G +D++ NNAGI     T +I  +K+ ++ V+ +N+TGVFL  + A ++M+  R G I+                Y  AK  V+G +K AA E     I VN + P  +A+ +         ED+E  +     L G   + ED+A    +LA S  A Y++G    IDGG  I
Sbjct:  130 DVSKEADVEAMMKTAIDAWGTIDVVVNNAGI--TRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKL----GEDMEKKILGTIPL-GRYGQPEDVAGLVEFLALSPAASYITGQAFTIDGGIAI 315          
BLAST of FC873825 vs. ExPASy Swiss-Prot
Match: FABG1_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 1, chloroplastic OS=Brassica napus GN=gbkr1 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.820e-15
Identity = 58/193 (30.05%), Postives = 93/193 (48.19%), Query Frame = 2
Query:   50 DVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLA-SDEAKYVSGHNLFIDGGFTI 625
            DV+ E+ ++  +   +   G +D++ NNAGI     T +I  +K+ ++ V+ +N+TGVFL  + A ++M+  R G I+                Y  AK  V+G +K AA E     I VN + P  +A+ +         ED+E  +     L G   + ED+A    +LA S  A Y++G    IDGG  I
Sbjct:  135 DVSKEADVEAMMKTAIDAWGTIDVVVNNAGI--TRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKL----GEDMEKKILGTIPL-GRYGQPEDVAGLVEFLALSPAASYITGQAFTIDGGIAI 320          
The following BLAST results are available for this feature:
BLAST of FC873825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
FABG_RICCN2.344e-1526.803-oxoacyl-[acyl-carrier-protein] reductase OS=Rick... [more]
DHGB_BACME2.344e-1531.61Glucose 1-dehydrogenase B OS=Bacillus megaterium G... [more]
FABG_RICTY3.998e-1528.363-oxoacyl-[acyl-carrier-protein] reductase OS=Rick... [more]
FABG_BUCBP3.998e-1526.403-oxoacyl-[acyl-carrier-protein] reductase OS=Buch... [more]
GNO_GLUOX5.222e-1528.65Gluconate 5-dehydrogenase OS=Gluconobacter oxydans... [more]
BAIA2_EUBSP5.222e-1529.47Bile acid 7-dehydroxylase 2 OS=Eubacterium sp. (st... [more]
HDHA_ECOLI6.820e-1532.117-alpha-hydroxysteroid dehydrogenase OS=Escherichi... [more]
HDHA_ECO576.820e-1532.117-alpha-hydroxysteroid dehydrogenase OS=Escherichi... [more]
FABG3_BRANA6.820e-1530.053-oxoacyl-[acyl-carrier-protein] reductase 3, chlo... [more]
FABG1_BRANA6.820e-1530.053-oxoacyl-[acyl-carrier-protein] reductase 1, chlo... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3DD06FM1 AbsDev Citrus clementina cDNA clone KN0AAI3DD06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873825 ID=FC873825; Name=FC873825; organism=Citrus clementina; type=EST; length=785bp
TTCAGTTGTTGAATCCATAGGCACATCAAACTCATCCTATGTCCATTGCG
ATGTCACAAACGAATCCCACATTAAAAATGCAATCGACCAAACCGTTGCA
ACTCATGGCAAGCTGGACATAATGTTCAACAACGCCGGCATAGGCGGCGC
TAACAAGACCCGCATAATCGACAATGAAAAGGCCGATTTCGAGCGTGTCC
TGAGTGTAAATGTCACCGGAGTTTTCTTGGGCATCAAGCATGCTGCTCGT
GTCATGATTCCGGCTCGCAGTGGCAGCATTCTTTCAACTGCTAGCGTTAG
CTCAAGGGTTGGTGCTGCTGCCTCACATGCATACTGTTGTGCAAAACATG
CTGTTTTAGGACTCACCAAAAATGCTGCTGTTGAGCTAGGCCAATTTGGG
ATTAGGGTGAATTGCTTGTCACCTTATGCTCTTGCAACACCTTTGGCTAC
CAGTTTTGTTGGGATTACCGATGAGGATCTGGAAGGTTTTATGAATTCAG
CGGCTAACCTTAAGGGTGTGACTTTAAGGACCGAAGATATTGCATATGCA
GCTCTTTATCTAGCGAGTGATGAGGCGAAGTATGTGAGTGGACACAATCT
TTTCATTGACGGAGGTTTCACTATTGTCAATCCCTCCCTCGGAATGTTTC
AGTACCCAGATTCTTGATCGAGTTAGTTAATTTCATCAAGGTTTTTTCCC
ATTTGAGTGGGGAAAAAAAAAACTCTGTTCAAATAATTTCATATTTGATC
CTTGATATCGAATGAAACAAAATTGAACAAGTTTT
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