FC873825

Overview
NameFC873825
Unique NameFC873825
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length785
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14971 contig Ccv1_Contig14971:185..969. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873825 vs. ExPASy Swiss-Prot
Match: FABG_RICFE (3-oxoacyl-[acyl-carrier-protein] reductase OS=Rickettsia felis GN=fabG PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.907e-15
Identity = 52/194 (26.80%), Postives = 94/194 (48.45%), Query Frame = 2
Query:   47 CDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGGFTIV 628
            C++ N+    N I +      KLDI+  NAGI   + T  I  +  DF++V+ +N+   F+  + A + M+  R G I+                YC +K  ++G+TK+ + E+   GI VN ++P  + + +      + ++  E  +       G     ED+A A  +LASD+A Y++G  + ++GG  +V
Sbjct:   59 CNLANKEECSNLISKAP----KLDILVCNAGI--TSDTLAIRMKDEDFDKVIDINLKANFILNREAIKKMMQNRYGRIINISSIVGISGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDK---LNEKQREAIVQKIP--LGTYGMPEDVANAVAFLASDQASYITGQTIHVNGGMLMV 241          
BLAST of FC873825 vs. ExPASy Swiss-Prot
Match: FABG2_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 2, chloroplastic OS=Brassica napus GN=bkr2 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.907e-15
Identity = 59/193 (30.57%), Postives = 92/193 (47.67%), Query Frame = 2
Query:   50 DVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLA-SDEAKYVSGHNLFIDGGFTI 625
            DV+ E+ +   +   V   G +D++ NNAGI     T +I  +K+ ++ V+ +N+TGVFL  + A ++M+  R G I+                Y  AK  V+G +K AA E     I VN + P  +A+ +         ED+E  +     L G   + ED+A    +LA S  A Y++G    IDGG  I
Sbjct:  143 DVSKEADVDAMMKTAVDAWGTIDVVVNNAGI--TRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKL----GEDMEKKILGTIPL-GRYGQPEDVAGLVEFLALSPAASYITGQAFTIDGGIAI 328          
BLAST of FC873825 vs. ExPASy Swiss-Prot
Match: FABG5_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 5, chloroplastic (Fragment) OS=Brassica napus GN=bkr1 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.163e-14
Identity = 58/193 (30.05%), Postives = 93/193 (48.19%), Query Frame = 2
Query:   50 DVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLA-SDEAKYVSGHNLFIDGGFTI 625
            DV+ E+ + + +   V   G +D++ NNAGI     T +I  +K+ ++ V+ +N+TGVFL  + A ++M+  R G I+                Y  AK  V+G +K AA E     I VN + P  +A+ +         ED+E  +     L G   + E +A    +LA S  + Y++GH   I GGF I
Sbjct:  132 DVSKEADVDSMMKTAVDKWGTIDVVVNNAGI--TRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKL----GEDMEKKILGTIPL-GRYGQPEYVAGLVEFLALSPASSYITGHTFSIHGGFAI 317          
BLAST of FC873825 vs. ExPASy Swiss-Prot
Match: NODG_RHIS3 (Nodulation protein G OS=Rhizobium sp. (strain N33) GN=nodG PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.384e-14
Identity = 52/193 (26.94%), Postives = 91/193 (47.15%), Query Frame = 2
Query:   50 DVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGGFTIV 628
            +++N   +K    +  A    +DI+ NNAGI        +    AD++ VL VN+T VF   +     M+  R G I+                YC +K  ++G +K+ A E+    I VNC++P  + + +      + D+  E  M +    +  T  + ++A A  YLAS+EA YV+G  + ++GG  ++
Sbjct:   60 NLSNRDEVKALGQKAEADLEGVDILVNNAGI--TKDGLFVRMSDADWDTVLEVNLTAVFRLTRELTHPMMRRRHGRIINITSVVGVTGNPGQTNYCASKAGMIGFSKSLAQEIATRNITVNCVAPGFIESAMTDK---LNDKQKEAIMAAIPTRRMGT--SVEVASAVAYLASNEAAYVTGQTIHVNGGLAMI 245          
BLAST of FC873825 vs. ExPASy Swiss-Prot
Match: DHK1_STRVN (Granaticin polyketide synthase putative ketoacyl reductase 1 OS=Streptomyces violaceoruber GN=gra-orf5 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.384e-14
Identity = 59/198 (29.80%), Postives = 90/198 (45.45%), Query Frame = 2
Query:   47 CDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARV--MIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLA----TSFVGITDEDLEGFMNSAANL--KGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGG 616
            CDV + + I+  +   V  +G +DI+ NNAG  G   T  I +E   +  V++ N+T VFL  K       M+  + G I+                Y  +KH V+GLTK   +EL + GI VN + P  + TP+A      + GI     E   +   N    G  + T ++A    YL +D+A  V+   L + GG
Sbjct:   73 CDVADPAQIRAYVAAAVQRYGTVDILVNNAGRSGGGATAEIADEL--WLDVITTNLTSVFLMTKEVLNAGGMLAKKRGRIINIASTGGKQGVVHAVPYSASKHGVVGLTKALGLELARTGITVNAVCPGFVETPMAERVREHYAGIWQVSEEETFDRITNRVPLGRYVETREVAAMVEYLVADDAAAVTAQALNVCGG 268          
BLAST of FC873825 vs. ExPASy Swiss-Prot
Match: BUDC_KLEPN (Acetoin(diacetyl) reductase OS=Klebsiella pneumoniae GN=budC PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 4.420e-14
Identity = 61/199 (30.65%), Postives = 89/199 (44.72%), Query Frame = 2
Query:   41 VHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIP-ARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMN--SAANLKGVTL----RTEDIAYAALYLASDEAKYVSGHNLFIDGG 616
            V  DV++   +  A++Q   T G  D++ NNAG+  +     I  E  D  +V ++NV GV  GI+ A          G I+                Y  +K AV GLT+ AA +L   GI VN   P  + TP+         E     +   +A   K +TL      ED+A    YLAS ++ Y++G +L IDGG
Sbjct:   56 VKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVD--KVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGG 252          
BLAST of FC873825 vs. ExPASy Swiss-Prot
Match: FABG4_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 4 (Fragment) OS=Brassica napus GN=bkr4 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.773e-14
Identity = 58/193 (30.05%), Postives = 91/193 (47.15%), Query Frame = 2
Query:   50 DVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLA-SDEAKYVSGHNLFIDGGFTI 625
            DV+ E+ +   +   V   G +D++ NNAG      T +I  +K+ ++ V+ +N+TGVFL  + A ++M+  R G I+                Y  AK  V+G +K AA E     I VN + P  +A+ +         ED+E  +     L G   + ED+A    +LA S  A Y++G    IDGG  I
Sbjct:   72 DVSKEADVDAMMKTAVDKWGTIDVVVNNAG-----DTLLIRMKKSQWDEVMDLNLTGVFLCSQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKL----GEDMEKKILGTIPL-GRYGQPEDVAGLVEFLALSPAASYITGQTFTIDGGIAI 254          
BLAST of FC873825 vs. ExPASy Swiss-Prot
Match: DHB14_BOVIN (17-beta-hydroxysteroid dehydrogenase 14 OS=Bos taurus GN=HSD17B14 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.286e-13
Identity = 54/194 (27.84%), Postives = 92/194 (47.42%), Query Frame = 2
Query:   38 YVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFM-NSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGG 616
            ++ CDVT E  ++  + +T+   G+LD + NNAG     +    +     F ++L +N+ G +   K A   +  +R G+++                Y   K AV  +TK  A++  Q+G+RVNC+SP  + TPL       T +        + A   G   +  ++A AA++LAS EA + +G  L + GG
Sbjct:   58 FLLCDVTREEDVRTLVSETIRRFGRLDCIVNNAGYHPPPQWPE-ETSAQGFRQLLELNLLGTYTLTKLALPHLRKSR-GNVINISSLVGAIGQSQAVPYVATKGAVTAMTKALALDESQYGVRVNCISPGNIWTPLWEELAASTPDPTATIREGTLAQPLGRMGQPAEVAAAAVFLAS-EATFCTGTELLVTGG 248          
BLAST of FC873825 vs. ExPASy Swiss-Prot
Match: DHRS4_PIG (Dehydrogenase/reductase SDR family member 4 OS=Sus scrofa GN=DHRS4 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.680e-13
Identity = 57/190 (30.00%), Postives = 87/190 (45.79%), Query Frame = 2
Query:   47 CDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGG 616
            C V      +  +   V  HG +DI+ +NA +       IID  +  ++++L VNV    L  K     M     GS+L                Y  +K A+LGLTKN AVEL    IRVNCL+P  + T    S V   D+  + +M  +  ++ +    ED A    +L S++A Y++G  + + GG
Sbjct:   70 CHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGN-IIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNF--SQVLWMDKARKEYMKESLRIRRLG-NPEDCAGIVSFLCSEDASYITGETVVVGGG 255          
BLAST of FC873825 vs. ExPASy Swiss-Prot
Match: BAIA1_EUBSP (Bile acid 7-dehydroxylase 1/3 OS=Eubacterium sp. (strain VPI 12708) GN=baiA1 PE=1 SV=3)

HSP 1 Score: 76.6406 bits (187), Expect = 1.680e-13
Identity = 54/190 (28.42%), Postives = 91/190 (47.89%), Query Frame = 2
Query:   50 DVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPLATSFVGITDEDLEGFMNSAANLKGVTLRTEDIAYAALYLASDEAKYVSGHNLFIDGGF 619
            D+T+   +  A+      +G+LD+M NNAGI   +    +  E  DF+ ++ +NV GVF G   A + M  A+ G I+                Y  +K  V+GLT     E+ +  IRV  ++P  + T +     G+  E LE ++ +    +   L+ E+IA   L+LASD A  ++   + +DG +
Sbjct:   65 DLTSRDAVMAAVGTVAQKYGRLDVMINNAGITMNSVFSRVSEE--DFKNIMDINVNGVFNGAWSAYQCMKDAKQGVIINTASVTGIYGSLSGIGYPTSKAGVIGLTHGLGREIIRKNIRVVGVAPGVVDTDMTK---GLPPEILEDYLKTLPMKR--MLKPEEIANVYLFLASDLASGITATTISVDGAY 247          
The following BLAST results are available for this feature:
BLAST of FC873825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
FABG_RICFE8.907e-1526.803-oxoacyl-[acyl-carrier-protein] reductase OS=Rick... [more]
FABG2_BRANA8.907e-1530.573-oxoacyl-[acyl-carrier-protein] reductase 2, chlo... [more]
FABG5_BRANA1.163e-1430.053-oxoacyl-[acyl-carrier-protein] reductase 5, chlo... [more]
NODG_RHIS33.384e-1426.94Nodulation protein G OS=Rhizobium sp. (strain N33)... [more]
DHK1_STRVN3.384e-1429.80Granaticin polyketide synthase putative ketoacyl r... [more]
BUDC_KLEPN4.420e-1430.65Acetoin(diacetyl) reductase OS=Klebsiella pneumoni... [more]
FABG4_BRANA5.773e-1430.053-oxoacyl-[acyl-carrier-protein] reductase 4 (Frag... [more]
DHB14_BOVIN1.286e-1327.8417-beta-hydroxysteroid dehydrogenase 14 OS=Bos tau... [more]
DHRS4_PIG1.680e-1330.00Dehydrogenase/reductase SDR family member 4 OS=Sus... [more]
BAIA1_EUBSP1.680e-1328.42Bile acid 7-dehydroxylase 1/3 OS=Eubacterium sp. (... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3DD06FM1 AbsDev Citrus clementina cDNA clone KN0AAI3DD06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873825 ID=FC873825; Name=FC873825; organism=Citrus clementina; type=EST; length=785bp
TTCAGTTGTTGAATCCATAGGCACATCAAACTCATCCTATGTCCATTGCG
ATGTCACAAACGAATCCCACATTAAAAATGCAATCGACCAAACCGTTGCA
ACTCATGGCAAGCTGGACATAATGTTCAACAACGCCGGCATAGGCGGCGC
TAACAAGACCCGCATAATCGACAATGAAAAGGCCGATTTCGAGCGTGTCC
TGAGTGTAAATGTCACCGGAGTTTTCTTGGGCATCAAGCATGCTGCTCGT
GTCATGATTCCGGCTCGCAGTGGCAGCATTCTTTCAACTGCTAGCGTTAG
CTCAAGGGTTGGTGCTGCTGCCTCACATGCATACTGTTGTGCAAAACATG
CTGTTTTAGGACTCACCAAAAATGCTGCTGTTGAGCTAGGCCAATTTGGG
ATTAGGGTGAATTGCTTGTCACCTTATGCTCTTGCAACACCTTTGGCTAC
CAGTTTTGTTGGGATTACCGATGAGGATCTGGAAGGTTTTATGAATTCAG
CGGCTAACCTTAAGGGTGTGACTTTAAGGACCGAAGATATTGCATATGCA
GCTCTTTATCTAGCGAGTGATGAGGCGAAGTATGTGAGTGGACACAATCT
TTTCATTGACGGAGGTTTCACTATTGTCAATCCCTCCCTCGGAATGTTTC
AGTACCCAGATTCTTGATCGAGTTAGTTAATTTCATCAAGGTTTTTTCCC
ATTTGAGTGGGGAAAAAAAAAACTCTGTTCAAATAATTTCATATTTGATC
CTTGATATCGAATGAAACAAAATTGAACAAGTTTT
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