FC873827

Overview
NameFC873827
Unique NameFC873827
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length856
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10185 contig Ccv1_Contig10185:1..856. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873827 vs. ExPASy Swiss-Prot
Match: IPYR_METKA (Inorganic pyrophosphatase OS=Methanopyrus kandleri GN=ppa PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.744e-41
Identity = 78/169 (46.15%), Postives = 110/169 (65.09%), Query Frame = 2
Query:  281 WHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASDAYNSVQQSMNLYAD 787
            W DLE GP  P +   VIEI +GS+ KYE D++ G   +DRVLYS   YP +YGFIPRTL +D DPLD+L+IMQ+P  PGC + A+ IGLM M+D  ++DDK++AV  +DP ++   D+ ++P H L EI   F +YK+ E KE  V  +  A  A  ++  ++ LY +
Sbjct:    5 WKDLEPGPNPPDVVYAVIEIPRGSRNKYEYDEERGFFKLDRVLYSPFHYPLDYGFIPRTLYDDGDPLDILVIMQDPTFPGCVIEARPIGLMKMLDDSDQDDKVLAVPTEDPRFKDVKDLDDVPKHLLDEIAHMFSEYKRLEGKETEVLGWEGADAAKEAIVHAIELYEE 173          
BLAST of FC873827 vs. ExPASy Swiss-Prot
Match: IPYR_PYRFU (Inorganic pyrophosphatase OS=Pyrococcus furiosus GN=ppa PE=1 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.089e-40
Identity = 79/171 (46.20%), Postives = 116/171 (67.84%), Query Frame = 2
Query:  275 HPWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASDAYNSVQQSMNLYAD 787
            +P+HDLE GP  P++   +IEI KGS+ KYELDKK+GL+ +DRVLYS   YP +YG IPRT  ED+DP D+++IM+EPV P   + A+ IGL  MID G+KD K++AV  +DP ++ + DI ++P   L EI  FF+ YK+ + KE+ V  +  A  A   + +++ +Y +
Sbjct:    2 NPFHDLEPGPDVPEVVYAIIEIPKGSRNKYELDKKTGLLKLDRVLYSPFFYPVDYGIIPRTWYEDDDPFDIMVIMREPVYPLTIIEARPIGLFKMIDSGDKDYKVLAVPVEDPYFKDWKDIDDVPKAFLDEIAHFFKRYKELQGKEIIVEGWEGAEAAKREILRAIEMYKE 172          
BLAST of FC873827 vs. ExPASy Swiss-Prot
Match: IPYR_THELI (Inorganic pyrophosphatase OS=Thermococcus litoralis GN=ppa PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.423e-40
Identity = 79/171 (46.20%), Postives = 115/171 (67.25%), Query Frame = 2
Query:  275 HPWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASDAYNSVQQSMNLYAD 787
            +P+HDLE GP  P++   +IEI KGS+ KYELDKK+GLI +DRVLYS   YP +YG IP+T  +D+DP D+++IM+EP  PG  + A+ IGL  MID G+KD K++AV  +DP +  + DI ++P   L EI  FF+ YK+ + KE+ V  +  A  A   + +++ LY +
Sbjct:    2 NPFHDLEPGPEVPEVVYALIEIPKGSRNKYELDKKTGLIKLDRVLYSPFHYPVDYGIIPQTWYDDDDPFDIMVIMREPTYPGVLIEARPIGLFKMIDSGDKDYKVLAVPVEDPYFNDWKDISDVPKAFLDEIAHFFQRYKELQGKEIIVEGWENAEKAKQEILRAIELYKE 172          
BLAST of FC873827 vs. ExPASy Swiss-Prot
Match: IPYR_PYRAB (Inorganic pyrophosphatase OS=Pyrococcus abyssi GN=ppa PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 5.406e-40
Identity = 78/171 (45.61%), Postives = 115/171 (67.25%), Query Frame = 2
Query:  275 HPWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASDAYNSVQQSMNLYAD 787
            +P+HDLE GP  P++   +IEI KGS+ KYELDKK+GL+ +DRVLYS   YP +YG IPRT  +D+DP D+++IM+EP  P   + A+ IGL  MID G+KD K++AV  +DP ++ + DI ++P   L EI  FF+ YK+ + KE+ V  +  A  A   + +++ LY +
Sbjct:    2 NPFHDLEPGPNVPEVVYALIEIPKGSRNKYELDKKTGLLKLDRVLYSPFFYPVDYGIIPRTWYDDDDPFDIMVIMREPTYPLTIIEARPIGLFKMIDSGDKDYKVLAVPVEDPYFKDWKDIDDVPKAFLDEIAHFFKRYKELQGKEIIVEGWEGAEAAKREILRAIELYKE 172          
BLAST of FC873827 vs. ExPASy Swiss-Prot
Match: IPYR_PYRHO (Inorganic pyrophosphatase OS=Pyrococcus horikoshii GN=ppa PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.054e-39
Identity = 77/171 (45.03%), Postives = 114/171 (66.67%), Query Frame = 2
Query:  275 HPWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASDAYNSVQQSMNLYAD 787
            +P+HDLE GP  P++   +IEI KGS+ KYELDK++GL+ +DRVLY+   YP +YG IPRT  ED DP D+++IM+EP  P   + A+ IGL  MID G+KD K++AV  +DP ++ + DI ++P   L EI  FF+ YK+ E KE+ V  +  A  A   + +++ +Y +
Sbjct:    2 NPFHDLEPGPNVPEVVYALIEIPKGSRNKYELDKETGLLKLDRVLYTPFHYPVDYGIIPRTWYEDGDPFDIMVIMREPTYPLTIIEARPIGLFKMIDSGDKDYKVLAVPVEDPYFKDWKDISDVPKAFLDEIAHFFKRYKELEGKEIIVEGWEGAEAAKREILRAIEMYKE 172          
BLAST of FC873827 vs. ExPASy Swiss-Prot
Match: IPYR_PYRKO (Inorganic pyrophosphatase OS=Pyrococcus kodakaraensis GN=ppa PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 5.060e-38
Identity = 75/171 (43.86%), Postives = 114/171 (66.67%), Query Frame = 2
Query:  275 HPWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASDAYNSVQQSMNLYAD 787
            +P+H+LE GP  P++   +IEI KGS+ KYELDKK+GL+ +DRVLYS   YP +YG IP+T  +D DP D+++IM+EPV P   + A+ IG+M M D G+KD K++AV  +DP ++ + DI ++P   L EI  FF+ YK+ + K   V  +  A +A   + +++ LY +
Sbjct:    2 NPFHELEPGPEVPEVVYALIEIPKGSRNKYELDKKTGLLKLDRVLYSPFFYPVDYGIIPQTWYDDGDPFDIMVIMREPVYPLTIVEARPIGIMKMEDSGDKDWKVLAVPVEDPYFKDWKDIDDVPKAFLDEIAHFFQRYKELQGKTTTVEGWGNAEEAKKEILRAIELYKE 172          
BLAST of FC873827 vs. ExPASy Swiss-Prot
Match: IPYR_PICTO (Inorganic pyrophosphatase OS=Picrophilus torridus GN=ppa PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 9.542e-37
Identity = 73/167 (43.71%), Postives = 101/167 (60.48%), Query Frame = 2
Query:  281 WHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASDAYNSVQQSMNLY 781
            WH +  GP  P     V+EI KG + KYE+ K+   I +DR++YSS VYP  YG IP+T   D DP+D ++ M +   PG  LRAK +G+M M+D G+ D+KII VC DDP Y   N+ +E+P H L E   FFE YKK +NKEV V  +     A   +++++  Y
Sbjct:    8 WHQVPPGPNPPDEVYVVVEIPKGERNKYEIAKEFPGIKLDRIIYSSYVYPLEYGLIPQTYYSDGDPIDAMVFMSQSTYPGVILRAKPVGMMNMVDSGDVDNKIICVCLDDPVYSKINNYREIPEHVLKETENFFETYKKLQNKEVKVTGWEGPDKAKQEIKKAIEDY 174          
BLAST of FC873827 vs. ExPASy Swiss-Prot
Match: IPYR_THEEB (Inorganic pyrophosphatase OS=Thermosynechococcus elongatus (strain BP-1) GN=ppa PE=3 SV=2)

HSP 1 Score: 153.295 bits (386), Expect = 1.628e-36
Identity = 71/143 (49.65%), Postives = 96/143 (67.13%), Query Frame = 2
Query:  287 DLEIGPGAPK--IFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENK 709
            DL   P  PK  + N ++EI  GS+ KYE DK+  +  +DRVLYS+VVYP++YGFIP TL +D DPLD L++M EP  PGC + A+ IG++ MID G++D+KI+ V  DDP Y     +K++ PHRL EI  FF  YK  + K
Sbjct:    4 DLSRIPAQPKPGVVNVLVEIAGGSRNKYEFDKEMKVFALDRVLYSAVVYPYDYGFIPNTLADDGDPLDGLVMMDEPTFPGCVIPARPIGMLEMIDSGDRDEKILCVPVDDPRYAEVKSLKDIAPHRLEEIAEFFRTYKNLQKK 146          
BLAST of FC873827 vs. ExPASy Swiss-Prot
Match: IPYR_HALSA (Inorganic pyrophosphatase OS=Halobacterium salinarium GN=ppa PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.126e-36
Identity = 75/171 (43.86%), Postives = 110/171 (64.33%), Query Frame = 2
Query:  272 AHPWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASDAYNSVQQSMNLY 781
            A+ W DLE GP AP +   V+E  KG + KYE DK    +++DRVL+S+V YP +YGFIP++  +D DP DVL+++++   PGC + A+ + LM M D GE+DDK+IAV  +DP Y    D+ +L   + AEI  FFE YK  E +KE AV  +  A  A ++++ + +LY
Sbjct:    2 ANLWEDLETGPDAPDVIYAVVECLKGERNKYEYDKDIPGVVLDRVLHSNVHYPSDYGFIPQSYYDDGDPFDVLVLVEDQTFPGCVIEARPVALMEMDDDGEQDDKVIAVPEEDPRYDDVEDVDDLTDQQKAEIAEFFETYKNLEADKETAVLGWGDAQAAKDAIEHAQDLY 172          
BLAST of FC873827 vs. ExPASy Swiss-Prot
Match: IPYR_THEAC (Inorganic pyrophosphatase OS=Thermoplasma acidophilum GN=ppa PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 6.185e-36
Identity = 72/169 (42.60%), Postives = 107/169 (63.31%), Query Frame = 2
Query:  281 WHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASDAYNSVQQSMNLYAD 787
            +H + +GP  P+    ++EI +GS+VKYE+ K    ++VDRVLYSSVVYP +YG IPRTL  D DP+DV++++ +P  PG  ++ + IG+M M+DQGE D+KI+AV   DP   +  D+K++  H L EI  FF  YK  E KE  V  +     A   ++ S+ +Y +
Sbjct:    5 YHSVPVGPKPPEEVYVIVEIPRGSRVKYEIAKDFPGMLVDRVLYSSVVYPVDYGLIPRTLYYDGDPMDVMVLISQPTFPGAIMKVRPIGMMKMVDQGETDNKILAVFDKDPNVSYIKDLKDVNAHLLDEIANFFSTYKILEKKETKVLGWEGKEAALKEIEVSIKMYEE 173          
The following BLAST results are available for this feature:
BLAST of FC873827 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 122
Match NameE-valueIdentityDescription
IPYR_METKA3.744e-4146.15Inorganic pyrophosphatase OS=Methanopyrus kandleri... [more]
IPYR_PYRFU1.089e-4046.20Inorganic pyrophosphatase OS=Pyrococcus furiosus G... [more]
IPYR_THELI1.423e-4046.20Inorganic pyrophosphatase OS=Thermococcus litorali... [more]
IPYR_PYRAB5.406e-4045.61Inorganic pyrophosphatase OS=Pyrococcus abyssi GN=... [more]
IPYR_PYRHO2.054e-3945.03Inorganic pyrophosphatase OS=Pyrococcus horikoshii... [more]
IPYR_PYRKO5.060e-3843.86Inorganic pyrophosphatase OS=Pyrococcus kodakaraen... [more]
IPYR_PICTO9.542e-3743.71Inorganic pyrophosphatase OS=Picrophilus torridus ... [more]
IPYR_THEEB1.628e-3649.65Inorganic pyrophosphatase OS=Thermosynechococcus e... [more]
IPYR_HALSA2.126e-3643.86Inorganic pyrophosphatase OS=Halobacterium salinar... [more]
IPYR_THEAC6.185e-3642.60Inorganic pyrophosphatase OS=Thermoplasma acidophi... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3DD08FM1 AbsDev Citrus clementina cDNA clone KN0AAI3DD08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873827 ID=FC873827; Name=FC873827; organism=Citrus clementina; type=EST; length=856bp
TCTCTTGCTTTCCTCTACTTAAGCGCCCGTAGAGGAACTTAACTTTAATA
TCTTCGCCATTACGCCTCTCTCTTTTCGAGATCGGTGCGTTTCTTTGTGG
TCTTGAAGCTTCGTTCTCGTTAGGCCCTGTTTGGCTTTCAGTACTTGAAC
CGTTACGGTTATGATGGCTCCACCAATTGAGACTTCAAGCAAAACTCCTG
TCTCCCAACCTCCAGCACATCCTCCGCTTAACGAAAGGATACTTTCTTCA
ATGAGCAGGAGGTCTGTTGCTGCACATCCTTGGCATGATCTTGAGATTGG
ACCTGGAGCTCCAAAGATTTTCAATTGCGTGATTGAAATTGGGAAAGGGA
GCAAGGTGAAATATGAACTTGACAAAAAATCTGGACTGATCATGGTTGAT
CGTGTTCTTTACTCTTCAGTTGTGTACCCCCATAACTATGGTTTCATACC
TCGTACTCTTTGCGAAGACAATGATCCCCTTGATGTCCTGATCATCATGC
AGGAGCCAGTTCTTCCAGGCTGCTTTCTTCGGGCTAAAGCCATTGGACTC
ATGCCTATGATTGATCAGGGTGAGAAAGATGATAAGATCATTGCTGTCTG
TGCTGATGATCCCGAGTACCGACACTACAATGACATTAAGGAGCTTCCAC
CACATCGTTTGGCTGAGATCCGCCGCTTCTTTGAAGACTACAAGAAAAAT
GAGAACAAGGAAGTTGCTGTAAATGACTTTCTGCCAGCCTCTGATGCCTA
TAATTCAGTCCAGCAGTCTATGAACCTCTATGCTGACTATATTGTGGAGA
GCTTGAGGCGGTAGTCGTTTGATCACCTGAGTGATAGATTCCGGCCGTGT
GATGTT
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