FC873827

Overview
NameFC873827
Unique NameFC873827
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length856
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873827 vs. ExPASy Swiss-Prot
Match: IPYR_METMA (Inorganic pyrophosphatase OS=Methanosarcina mazei GN=ppa PE=3 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 2.973e-30
Identity = 63/153 (41.18%), Postives = 94/153 (61.44%), Query Frame = 2
Query:  329 VIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASDAYNSVQQSMNLYAD 787
            +IEI +GS+ KYE DK+  +I  DR+L+SS+VYP +YGF P TL  D DPLD +++M EP  PGC +    + ++ M D   +D+KI+ V   DP + +   I+++PPH L EI  FFE YK  E K+V V  +     A   +Q++ + Y +
Sbjct:   10 LIEIPQGSRNKYEYDKERKVIRFDRMLFSSIVYPCDYGFFPDTLALDGDPLDAMVLMWEPTFPGCVIDVHPVAMLDMEDDKGRDEKILCVPQRDPLWNYIKTIEQVPPHLLKEITHFFETYKNLERKDVVVYGWRDLETARKVIQEAKDRYTE 162          
BLAST of FC873827 vs. ExPASy Swiss-Prot
Match: IPYR_BACST (Inorganic pyrophosphatase OS=Bacillus stearothermophilus GN=ppa PE=1 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 2.973e-30
Identity = 61/136 (44.85%), Postives = 83/136 (61.03%), Query Frame = 2
Query:  314 KIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAV 721
            KI    IEI  GS+ KYE DK+ G+  +DRVLYS + YP  YG++  TL  D DPLD+L+I   P  PGC +  + IG + M+D GE+D K+I V  +DP +     I++LP H+L EI  FFE YK  + K   +
Sbjct:    6 KIVEAFIEIPTGSQNKYEFDKERGIFKLDRVLYSPMFYPAEYGYLQNTLALDGDPLDILVITTNPTFPGCVIDTRVIGYLNMVDSGEEDAKLIGVPVEDPRFDEVRSIEDLPQHKLKEIAHFFERYKDLQGKRTEI 141          
BLAST of FC873827 vs. ExPASy Swiss-Prot
Match: IPYR_STRCO (Inorganic pyrophosphatase OS=Streptomyces coelicolor GN=ppa PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.071e-30
Identity = 66/157 (42.04%), Postives = 95/157 (60.51%), Query Frame = 2
Query:  320 FNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASDAYNSVQQSMNLYAD 787
            F+  IEI KGS+ KYE+D ++G I +DR L++S  YP +YGF+  TL ED DPLD L+I+ EP  PGC +R +AIG+  M D+   DDK++ V + DP   H  DI  +      EI+ FFE YK  E  K V   D++  ++A   +++S   + D
Sbjct:    3 FDVTIEIPKGSRNKYEVDHETGRIRLDRRLFTSTAYPTDYGFVENTLGEDGDPLDALVILDEPTFPGCLIRCRAIGMFRMTDEAGGDDKLLCVPSTDPRVEHLRDIHHVSEFDRLEIQHFFEVYKDLEPGKSVEGADWVGRTEAEAEIERSYKRFKD 159          
BLAST of FC873827 vs. ExPASy Swiss-Prot
Match: IPYR_BACP3 (Inorganic pyrophosphatase OS=Bacillus PS3 GN=ppa PE=1 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 5.071e-30
Identity = 61/136 (44.85%), Postives = 83/136 (61.03%), Query Frame = 2
Query:  314 KIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAV 721
            KI    IEI  GS+ KYE DK+ G+  +DRVLYS + YP  YG++  TL  D DPLD+L+I   P  PGC +  + IG + M+D GE+D K+I V  +DP +     I++LP H+L EI  FFE YK  + K   +
Sbjct:    6 KIVEAFIEIPTGSQNKYEFDKERGIFKLDRVLYSPMFYPAEYGYLQNTLALDGDPLDILVITTNPPFPGCVIDTRVIGYLNMVDSGEEDAKLIGVPVEDPRFDEVRSIEDLPQHKLKEIAHFFERYKDLQGKRTEI 141          
BLAST of FC873827 vs. ExPASy Swiss-Prot
Match: IPYR_SULTO (Inorganic pyrophosphatase OS=Sulfolobus tokodaii GN=ppa PE=1 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 3.287e-29
Identity = 72/166 (43.37%), Postives = 105/166 (63.25%), Query Frame = 2
Query:  290 LEIGPG--APKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASDAYNSVQQSM 772
            +++ PG  AP   N +IEI  GS +KYE D++  ++ VDR+LY+S+VYP NYGFIP TL ED DPLDVL+I   P+LPG  +  + IG++ M D+  +D KIIAV  D  DP + +  DI +LP     +I  FFE YK+ E  K V ++ +   S+A   + +++
Sbjct:    1 MKLSPGKKAPDEVNVLIEIPLGSNIKYEYDEEEEVVKVDRILYTSMVYPFNYGFIPGTLEEDGDPLDVLVISNYPLLPGTAIEVRPIGILYMRDEEGEDAKIIAVPKDKVDPTFSNIKDIIDLPQAIKDKINHFFEHYKELEPGKWVKISGWGGVSEAKTRINEAI 166          
BLAST of FC873827 vs. ExPASy Swiss-Prot
Match: IPYR_METAC (Inorganic pyrophosphatase OS=Methanosarcina acetivorans GN=ppa PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 7.323e-29
Identity = 63/158 (39.87%), Postives = 96/158 (60.76%), Query Frame = 2
Query:  314 KIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASDAYNSVQQSMNLYAD 787
            ++ + +IEI KGS+ KYE DK+  +I  DR+L+SS+VYP +YGF P TL  D DPLD L++  EP  PGC +    + L+ M D   +D+KI+ V   DP + +   ++++PPH L EI  FFE YK  E K V V  +     A + ++++ + Y +
Sbjct:    8 QVESVLIEIPKGSRNKYEYDKEKKVIKFDRMLFSSMVYPCDYGFFPDTLALDGDPLDALVLTWEPTFPGCVIDVHPVALLDMKDDKGRDEKILCVPETDPLWNYIETLEQVPPHLLKEIVHFFETYKNLEGKHVIVIGWEGLDAAVDMLREAKSRYLE 165          
BLAST of FC873827 vs. ExPASy Swiss-Prot
Match: IPYR_MYCTU (Inorganic pyrophosphatase OS=Mycobacterium tuberculosis GN=ppa PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.631e-28
Identity = 62/155 (40.00%), Postives = 96/155 (61.94%), Query Frame = 2
Query:  320 FNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASDAYNSVQQSMNLY 781
            F+  IEI KG + KYE+D ++G + +DR LY+ + YP +YGFI  TL +D DPLD L+++ +PV PG  + A+ +G+  M+D+   DDK++ V A DP + H  DI ++P   L  I+ FF  YK  E  K V   D++  ++A   VQ+S+  +
Sbjct:    3 FDVTIEIPKGQRNKYEVDHETGRVRLDRYLYTPMAYPTDYGFIEDTLGDDGDPLDALVLLPQPVFPGVLVAARPVGMFRMVDEHGGDDKVLCVPAGDPRWDHVQDIGDVPAFELDAIKHFFVHYKDLEPGKFVKAADWVDRAEAEAEVQRSVERF 157          
BLAST of FC873827 vs. ExPASy Swiss-Prot
Match: IPYR_MYCBO (Inorganic pyrophosphatase OS=Mycobacterium bovis GN=ppa PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.631e-28
Identity = 62/155 (40.00%), Postives = 96/155 (61.94%), Query Frame = 2
Query:  320 FNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASDAYNSVQQSMNLY 781
            F+  IEI KG + KYE+D ++G + +DR LY+ + YP +YGFI  TL +D DPLD L+++ +PV PG  + A+ +G+  M+D+   DDK++ V A DP + H  DI ++P   L  I+ FF  YK  E  K V   D++  ++A   VQ+S+  +
Sbjct:    3 FDVTIEIPKGQRNKYEVDHETGRVRLDRYLYTPMAYPTDYGFIEDTLGDDGDPLDALVLLPQPVFPGVLVAARPVGMFRMVDEHGGDDKVLCVPAGDPRWDHVQDIGDVPAFELDAIKHFFVHYKDLEPGKFVKAADWVDRAEAEAEVQRSVERF 157          
BLAST of FC873827 vs. ExPASy Swiss-Prot
Match: IPYR_LEIXX (Inorganic pyrophosphatase OS=Leifsonia xyli subsp. xyli GN=ppa PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.783e-28
Identity = 62/149 (41.61%), Postives = 96/149 (64.43%), Query Frame = 2
Query:  320 FNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASDAYNSVQ 763
            ++ VIEI KGS+ KYE+D ++G + +DRVL+++ VYP +YGF   TL +D DPLDVL++++ PV PG  ++ + +G++ M D+   D KIIAV   DP ++H  D+ ++P +   EI  FF  YK  E  K V +  +  A++A   VQ
Sbjct:    4 YDVVIEIPKGSRNKYEVDHETGRVYLDRVLFTAFVYPADYGFFENTLGDDGDPLDVLVLLEYPVFPGVGIKVRPVGVLKMSDEAGGDAKIIAVQHKDPRWQHIQDVNDIPEYTRKEIEHFFARYKDLEPGKFVTIEGWGDAAEAEKIVQ 152          
BLAST of FC873827 vs. ExPASy Swiss-Prot
Match: IPYR_BRUSU (Inorganic pyrophosphatase OS=Brucella suis GN=ppa PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.634e-28
Identity = 64/151 (42.38%), Postives = 93/151 (61.59%), Query Frame = 2
Query:  290 LEIGPGAPKIFNCVIEIGKGSK-VKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFEDYKKNE-NKEVAVNDF 730
            + IG   P+  N +IE+  G + +KYE+DKK+G ++VDR LY+ + YP NYGF+P TL ED DP+DVL+    P++PGC +  + IG++ M D   KD+KIIAV +      Y   +D  ++P   L +I  FFE YK  E  K V + D+
Sbjct:    6 ISIGSNPPEDVNVIIEVPVGGQPIKYEMDKKAGALIVDRFLYTPMTYPGNYGFVPHTLSEDGDPIDVLVCNTRPLIPGCVINVRPIGVLVMEDNSGKDEKIIAVPSPHLTRRYEKIHDYTDMPEITLKQIAHFFEHYKDLEPGKWVKIGDW 156          
The following BLAST results are available for this feature:
BLAST of FC873827 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 122
Match NameE-valueIdentityDescription
IPYR_METMA2.973e-3041.18Inorganic pyrophosphatase OS=Methanosarcina mazei ... [more]
IPYR_BACST2.973e-3044.85Inorganic pyrophosphatase OS=Bacillus stearothermo... [more]
IPYR_STRCO5.071e-3042.04Inorganic pyrophosphatase OS=Streptomyces coelicol... [more]
IPYR_BACP35.071e-3044.85Inorganic pyrophosphatase OS=Bacillus PS3 GN=ppa P... [more]
IPYR_SULTO3.287e-2943.37Inorganic pyrophosphatase OS=Sulfolobus tokodaii G... [more]
IPYR_METAC7.323e-2939.87Inorganic pyrophosphatase OS=Methanosarcina acetiv... [more]
IPYR_MYCTU1.631e-2840.00Inorganic pyrophosphatase OS=Mycobacterium tubercu... [more]
IPYR_MYCBO1.631e-2840.00Inorganic pyrophosphatase OS=Mycobacterium bovis G... [more]
IPYR_LEIXX2.783e-2841.61Inorganic pyrophosphatase OS=Leifsonia xyli subsp.... [more]
IPYR_BRUSU3.634e-2842.38Inorganic pyrophosphatase OS=Brucella suis GN=ppa ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3DD08FM1 AbsDev Citrus clementina cDNA clone KN0AAI3DD08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873827 ID=FC873827; Name=FC873827; organism=Citrus clementina; type=EST; length=856bp
TCTCTTGCTTTCCTCTACTTAAGCGCCCGTAGAGGAACTTAACTTTAATA
TCTTCGCCATTACGCCTCTCTCTTTTCGAGATCGGTGCGTTTCTTTGTGG
TCTTGAAGCTTCGTTCTCGTTAGGCCCTGTTTGGCTTTCAGTACTTGAAC
CGTTACGGTTATGATGGCTCCACCAATTGAGACTTCAAGCAAAACTCCTG
TCTCCCAACCTCCAGCACATCCTCCGCTTAACGAAAGGATACTTTCTTCA
ATGAGCAGGAGGTCTGTTGCTGCACATCCTTGGCATGATCTTGAGATTGG
ACCTGGAGCTCCAAAGATTTTCAATTGCGTGATTGAAATTGGGAAAGGGA
GCAAGGTGAAATATGAACTTGACAAAAAATCTGGACTGATCATGGTTGAT
CGTGTTCTTTACTCTTCAGTTGTGTACCCCCATAACTATGGTTTCATACC
TCGTACTCTTTGCGAAGACAATGATCCCCTTGATGTCCTGATCATCATGC
AGGAGCCAGTTCTTCCAGGCTGCTTTCTTCGGGCTAAAGCCATTGGACTC
ATGCCTATGATTGATCAGGGTGAGAAAGATGATAAGATCATTGCTGTCTG
TGCTGATGATCCCGAGTACCGACACTACAATGACATTAAGGAGCTTCCAC
CACATCGTTTGGCTGAGATCCGCCGCTTCTTTGAAGACTACAAGAAAAAT
GAGAACAAGGAAGTTGCTGTAAATGACTTTCTGCCAGCCTCTGATGCCTA
TAATTCAGTCCAGCAGTCTATGAACCTCTATGCTGACTATATTGTGGAGA
GCTTGAGGCGGTAGTCGTTTGATCACCTGAGTGATAGATTCCGGCCGTGT
GATGTT
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