FC873827

Overview
NameFC873827
Unique NameFC873827
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length856
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873827 vs. ExPASy Swiss-Prot
Match: IPYR_HAEIN (Inorganic pyrophosphatase OS=Haemophilus influenzae GN=ppa PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.338e-22
Identity = 58/127 (45.67%), Postives = 79/127 (62.20%), Query Frame = 2
Query:  317 IFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRH-YNDIKELPPHRLAEIRRFFEDYK 694
            I N V EI +GS  K E ++K     +DRV  +    P NYGFIP+TL ED D LDVL+I ++P+  G FL AK IG+M  +D GE DDKI+ V ADD +  + YN + +LP + + +I   F +YK
Sbjct:   17 IINVVNEIPEGSCHKIEWNRKVAAFQLDRVEPAIFAKPTNYGFIPQTLDEDGDELDVLLITRQPLATGVFLEAKVIGVMKFVDDGEVDDKIVCVPADDRDTGNAYNSLADLPANLIKQIEFHFNNYK 143          
BLAST of FC873827 vs. ExPASy Swiss-Prot
Match: IPYR_VIBPA (Inorganic pyrophosphatase OS=Vibrio parahaemolyticus GN=ppa PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.282e-22
Identity = 59/161 (36.65%), Postives = 90/161 (55.90%), Query Frame = 2
Query:  299 GPGAPKIFNCVIEI-GKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAV--CADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNEN-KEVAVNDFLPASDAYNSVQQS 769
            G   P+    VIEI      +KYE+DK SG + VDR + + + YP NYG++  TL  D DP+DVL+    P++PG  +R + +G++ M D+  +D K++AV       EY H  D+ ++P    A+I  FFE YK+ E+ K V V+ +     A   + QS
Sbjct:    9 GKSLPEDIYVVIEIPANADPIKYEVDKDSGAVFVDRFMSAPMFYPCNYGYVNNTLSLDGDPVDVLVPTPYPLMPGSVIRCRPVGVLKMTDESGEDAKVVAVPHSKISKEYEHIQDVGDIPELLKAQITHFFERYKELESGKWVKVDGWADVEAAKAEILQS 169          
BLAST of FC873827 vs. ExPASy Swiss-Prot
Match: IPYR_RICCN (Inorganic pyrophosphatase OS=Rickettsia conorii GN=ppa PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.282e-22
Identity = 56/130 (43.08%), Postives = 79/130 (60.77%), Query Frame = 2
Query:  323 NCVIEIGKGS-KVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFEDYKKNE 703
            N +IEI   S  +KYE DK+SG I VDR + +++ YP NYGFIP TL  D DP+DVL++   PV+PG  ++ +A+G++ M D+   D+KIIAV     D  + H  ++ +L       I  FFE YK  E
Sbjct:   16 NVIIEIPMNSGPIKYEFDKESGAIFVDRFMQTTMSYPCNYGFIPHTLSNDGDPVDVLVVAHHPVVPGSVIKCRAVGVLMMEDESGLDEKIIAVPTSKLDITFDHIKELDDLCDMLKQRIVHFFEHYKDLE 145          
BLAST of FC873827 vs. ExPASy Swiss-Prot
Match: IPYR_VIBVY (Inorganic pyrophosphatase OS=Vibrio vulnificus (strain YJ016) GN=ppa PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.980e-22
Identity = 54/144 (37.50%), Postives = 84/144 (58.33%), Query Frame = 2
Query:  284 HDLEIGPGAPKIFNCVIEI-GKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFEDYKKNEN 706
            +++  G   P     VIEI      +KYE+DK+SG + VDR + + + YP NYG++  TL  D DP+DVL+    P++PG  +R + +G++ M D+  +D K++AV       EY H  D+ +LP    A+I  FFE YK+ E+
Sbjct:    4 NNVPAGKSLPDDLYVVIEIPANADPIKYEVDKESGAVFVDRFMSAPMFYPCNYGYVNHTLSLDGDPVDVLVPTPYPLMPGSVIRCRPVGVLKMTDESGEDAKVVAVPHSKLSKEYDHIQDVNDLPELLKAQITHFFERYKELES 147          
BLAST of FC873827 vs. ExPASy Swiss-Prot
Match: IPYR_VIBVU (Inorganic pyrophosphatase OS=Vibrio vulnificus GN=ppa PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.980e-22
Identity = 54/144 (37.50%), Postives = 84/144 (58.33%), Query Frame = 2
Query:  284 HDLEIGPGAPKIFNCVIEI-GKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFEDYKKNEN 706
            +++  G   P     VIEI      +KYE+DK+SG + VDR + + + YP NYG++  TL  D DP+DVL+    P++PG  +R + +G++ M D+  +D K++AV       EY H  D+ +LP    A+I  FFE YK+ E+
Sbjct:    4 NNVPAGKSLPDDLYVVIEIPANADPIKYEVDKESGAVFVDRFMSAPMFYPCNYGYVNHTLSLDGDPVDVLVPTPYPLMPGSVIRCRPVGVLKMTDESGEDAKVVAVPHSKLSKEYDHIQDVNDLPELLKAQITHFFERYKELES 147          
BLAST of FC873827 vs. ExPASy Swiss-Prot
Match: IPYR_RICTY (Inorganic pyrophosphatase OS=Rickettsia typhi GN=ppa PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.980e-22
Identity = 57/130 (43.85%), Postives = 79/130 (60.77%), Query Frame = 2
Query:  323 NCVIEIGKGS-KVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFEDYKKNE 703
            N +IEI   S  +KYE DK+SG I VDR + +++ YP NYGFIP TL  D DP+DVL++   PV+PG  ++ +AIG++ M D+   D+KIIAV     D  + H  ++ +L       I  FFE YK  E
Sbjct:   16 NVIIEIPMNSGPIKYEFDKESGAIFVDRFMQTTMSYPCNYGFIPDTLSNDGDPVDVLVVAHHPVVPGSVIKCRAIGVLMMEDESGLDEKIIAVPTSKLDITFDHIQELDDLCKMLKKRIVHFFEHYKDLE 145          
BLAST of FC873827 vs. ExPASy Swiss-Prot
Match: IPYR_PSEAE (Inorganic pyrophosphatase OS=Pseudomonas aeruginosa GN=ppa PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.980e-22
Identity = 59/139 (42.45%), Postives = 81/139 (58.27%), Query Frame = 2
Query:  299 GPGAPKIFNCVIEI-GKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKE---LPPHRLAEIRRFFEDYKKNE 703
            G   P      IEI    + +KYE+DK +  + VDR + + + YP NYGFIP TL +D DPLDVL++   PV PG  +RA+ +G++ M D+   D K+IAV  D      Y D+KE   LP   L +I+ FFE+YK  E
Sbjct:    9 GKDLPNDIYVAIEIPANHAPIKYEIDKDTDCLFVDRFMATPMFYPANYGFIPNTLADDGDPLDVLVVTPYPVAPGSVIRARPVGVLHMTDEAGGDAKLIAVPHDKLSVL-YKDVKEYTDLPALLLEQIKHFFENYKDLE 146          
BLAST of FC873827 vs. ExPASy Swiss-Prot
Match: IPYR_RHORT (Inorganic pyrophosphatase OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=ppa PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.892e-22
Identity = 57/165 (34.55%), Postives = 97/165 (58.79%), Query Frame = 2
Query:  290 LEIGPGAPKIFNCVIEIGK-GSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADD--PEYRHYNDIKELPPHRLAEIRRFFEDYKK-NENKEVAVNDFLPASDAYNSVQQSM 772
            + +G   P+  N +IEI      VKYE+DK+SG + VDR L++++ YP NYGF+P TL +D DP+DV+++ + PV  G  +R + +G++ M D+  +D+KI+ V      P + + N+  +L P  L  I  FF  YK   E K V +  +    +A++ +++ +
Sbjct:    6 IPVGKNPPQDVNVIIEIPLLADPVKYEVDKESGAMFVDRFLHTAMHYPCNYGFVPHTLSDDGDPVDVMVVGRIPVAVGSVMRTRPVGVLYMEDEAGRDEKILGVPHSKLYPYHDNVNNFGDLRPIELRRIEHFFAHYKDLEEGKWVKILGWGNYKEAWDVIERGI 170          
BLAST of FC873827 vs. ExPASy Swiss-Prot
Match: IPYR_RICPR (Inorganic pyrophosphatase OS=Rickettsia prowazekii GN=ppa PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.083e-22
Identity = 56/130 (43.08%), Postives = 79/130 (60.77%), Query Frame = 2
Query:  323 NCVIEIGKGS-KVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFEDYKKNE 703
            N +IEI   S  +KYE DK+SG + VDR + +++ YP NYGFIP TL  D DP+DVL++   PV+PG  ++ +AIG++ M D+   D+KIIAV     D  + H  ++ +L       I  FFE YK  E
Sbjct:   16 NVIIEIPMNSGPIKYEFDKESGALFVDRFMQTTMSYPCNYGFIPDTLSNDGDPVDVLVVAHHPVVPGSVIKCRAIGVLMMEDESGLDEKIIAVPTSKLDITFDHIKELDDLCEMLKKRIVHFFEHYKDLE 145          
BLAST of FC873827 vs. ExPASy Swiss-Prot
Match: IPYR_HAEDU (Inorganic pyrophosphatase OS=Haemophilus ducreyi GN=ppa PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.083e-22
Identity = 60/161 (37.27%), Postives = 89/161 (55.28%), Query Frame = 2
Query:  299 GPGAPKIFNCVIEIGKGSK-VKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAV--CADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASDAYNSVQQS 769
            G   P     VIEI   S  +KYE+DK+SG + VDR + +++ YP NYG++  TL  D DP+DVL+    P+ PG  +R + +G++ M D+   D K++AV       EY H  D+ +LP    A+I+ FFE YK  E  K V V  +   ++A   +  S
Sbjct:    9 GKALPDDIYVVIEIPANSDPIKYEVDKESGSLFVDRFMSTAMFYPANYGYVNHTLSSDGDPVDVLVPTPYPLQPGSVIRCRPVGVLKMTDEAGGDAKVVAVPHTKLTKEYDHIKDVNDLPALLKAQIQHFFESYKALEVGKWVKVEGWGDVNEARQEILDS 169          
The following BLAST results are available for this feature:
BLAST of FC873827 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 122
Match NameE-valueIdentityDescription
IPYR_HAEIN1.338e-2245.67Inorganic pyrophosphatase OS=Haemophilus influenza... [more]
IPYR_VIBPA2.282e-2236.65Inorganic pyrophosphatase OS=Vibrio parahaemolytic... [more]
IPYR_RICCN2.282e-2243.08Inorganic pyrophosphatase OS=Rickettsia conorii GN... [more]
IPYR_VIBVY2.980e-2237.50Inorganic pyrophosphatase OS=Vibrio vulnificus (st... [more]
IPYR_VIBVU2.980e-2237.50Inorganic pyrophosphatase OS=Vibrio vulnificus GN=... [more]
IPYR_RICTY2.980e-2243.85Inorganic pyrophosphatase OS=Rickettsia typhi GN=p... [more]
IPYR_PSEAE2.980e-2242.45Inorganic pyrophosphatase OS=Pseudomonas aeruginos... [more]
IPYR_RHORT3.892e-2234.55Inorganic pyrophosphatase OS=Rhodospirillum rubrum... [more]
IPYR_RICPR5.083e-2243.08Inorganic pyrophosphatase OS=Rickettsia prowazekii... [more]
IPYR_HAEDU5.083e-2237.27Inorganic pyrophosphatase OS=Haemophilus ducreyi G... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3DD08FM1 AbsDev Citrus clementina cDNA clone KN0AAI3DD08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873827 ID=FC873827; Name=FC873827; organism=Citrus clementina; type=EST; length=856bp
TCTCTTGCTTTCCTCTACTTAAGCGCCCGTAGAGGAACTTAACTTTAATA
TCTTCGCCATTACGCCTCTCTCTTTTCGAGATCGGTGCGTTTCTTTGTGG
TCTTGAAGCTTCGTTCTCGTTAGGCCCTGTTTGGCTTTCAGTACTTGAAC
CGTTACGGTTATGATGGCTCCACCAATTGAGACTTCAAGCAAAACTCCTG
TCTCCCAACCTCCAGCACATCCTCCGCTTAACGAAAGGATACTTTCTTCA
ATGAGCAGGAGGTCTGTTGCTGCACATCCTTGGCATGATCTTGAGATTGG
ACCTGGAGCTCCAAAGATTTTCAATTGCGTGATTGAAATTGGGAAAGGGA
GCAAGGTGAAATATGAACTTGACAAAAAATCTGGACTGATCATGGTTGAT
CGTGTTCTTTACTCTTCAGTTGTGTACCCCCATAACTATGGTTTCATACC
TCGTACTCTTTGCGAAGACAATGATCCCCTTGATGTCCTGATCATCATGC
AGGAGCCAGTTCTTCCAGGCTGCTTTCTTCGGGCTAAAGCCATTGGACTC
ATGCCTATGATTGATCAGGGTGAGAAAGATGATAAGATCATTGCTGTCTG
TGCTGATGATCCCGAGTACCGACACTACAATGACATTAAGGAGCTTCCAC
CACATCGTTTGGCTGAGATCCGCCGCTTCTTTGAAGACTACAAGAAAAAT
GAGAACAAGGAAGTTGCTGTAAATGACTTTCTGCCAGCCTCTGATGCCTA
TAATTCAGTCCAGCAGTCTATGAACCTCTATGCTGACTATATTGTGGAGA
GCTTGAGGCGGTAGTCGTTTGATCACCTGAGTGATAGATTCCGGCCGTGT
GATGTT
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