FC873851
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873851 vs. ExPASy Swiss-Prot
Match: CLPB_STAAN (Chaperone protein clpB OS=Staphylococcus aureus (strain N315) GN=clpB PE=1 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 4.901e-67 Identity = 144/331 (43.50%), Postives = 198/331 (59.82%), Query Frame = 2 Query: 2 RYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQIT----------------------------KEKNEAVRGQ---DFEKAGELRDREMDLKAQISALVDKG--------------------KEMSKAETEAGD---------VGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIER 814 RYE++H +R D ALV+AA+LS +YI+DRFLPDKAIDL+D+A + +R P E ++ + + Q+ KEK A++ + + EK L+++ L AL D KE+ + E D + VVT+ +I IVS WTGIPV K+ E ++LL + + LHKRV+GQD+AV +S A+ RAR G+K+PNRPI SF+F GPTGVGK+ELAK+LAA F SE+ MIR+DMSE+ME+H VS+LIG+PPGY+G+ EGGQLTEAVRR PY+V+L DE+E+ Sbjct: 355 RYEVYHGVRIQDRALVAAAELSDRYITDRFLPDKAIDLVDQACATIRTEMGSNPTELDQVNRRVMQLEIEESALKNESDNASKQRLQELQEELANEKEKQAALQSRVESEKEKIANLQEKRAQLDESRQALEDAQTNNNLEKAAELQYGTIPQLEKELRELEDNFQDEQGEDTDRMIREVVTDEEIGDIVSQWTGIPVSKLVETEREKLLHLSDILHKRVVGQDKAVDLVSDAVVRARAGIKDPNRPIGSFLFLGPTGVGKTELAKSLAASLFDSEKHMIRIDMSEYMEKHAVSRLIGAPPGYIGHDEGGQLTEAVRRNPYSVILLDEVEK 685
BLAST of FC873851 vs. ExPASy Swiss-Prot
Match: CLPB_STAAM (Chaperone protein clpB OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=clpB PE=1 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 4.901e-67 Identity = 144/331 (43.50%), Postives = 198/331 (59.82%), Query Frame = 2 Query: 2 RYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQIT----------------------------KEKNEAVRGQ---DFEKAGELRDREMDLKAQISALVDKG--------------------KEMSKAETEAGD---------VGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIER 814 RYE++H +R D ALV+AA+LS +YI+DRFLPDKAIDL+D+A + +R P E ++ + + Q+ KEK A++ + + EK L+++ L AL D KE+ + E D + VVT+ +I IVS WTGIPV K+ E ++LL + + LHKRV+GQD+AV +S A+ RAR G+K+PNRPI SF+F GPTGVGK+ELAK+LAA F SE+ MIR+DMSE+ME+H VS+LIG+PPGY+G+ EGGQLTEAVRR PY+V+L DE+E+ Sbjct: 355 RYEVYHGVRIQDRALVAAAELSDRYITDRFLPDKAIDLVDQACATIRTEMGSNPTELDQVNRRVMQLEIEESALKNESDNASKQRLQELQEELANEKEKQAALQSRVESEKEKIANLQEKRAQLDESRQALEDAQTNNNLEKAAELQYGTIPQLEKELRELEDNFQDEQGEDTDRMIREVVTDEEIGDIVSQWTGIPVSKLVETEREKLLHLSDILHKRVVGQDKAVDLVSDAVVRARAGIKDPNRPIGSFLFLGPTGVGKTELAKSLAASLFDSEKHMIRIDMSEYMEKHAVSRLIGAPPGYIGHDEGGQLTEAVRRNPYSVILLDEVEK 685
BLAST of FC873851 vs. ExPASy Swiss-Prot
Match: CLPB_STAAC (Chaperone protein clpB OS=Staphylococcus aureus (strain COL) GN=clpB PE=3 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 4.901e-67 Identity = 144/331 (43.50%), Postives = 198/331 (59.82%), Query Frame = 2 Query: 2 RYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQIT----------------------------KEKNEAVRGQ---DFEKAGELRDREMDLKAQISALVDKG--------------------KEMSKAETEAGD---------VGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIER 814 RYE++H +R D ALV+AA+LS +YI+DRFLPDKAIDL+D+A + +R P E ++ + + Q+ KEK A++ + + EK L+++ L AL D KE+ + E D + VVT+ +I IVS WTGIPV K+ E ++LL + + LHKRV+GQD+AV +S A+ RAR G+K+PNRPI SF+F GPTGVGK+ELAK+LAA F SE+ MIR+DMSE+ME+H VS+LIG+PPGY+G+ EGGQLTEAVRR PY+V+L DE+E+ Sbjct: 355 RYEVYHGVRIQDRALVAAAELSDRYITDRFLPDKAIDLVDQACATIRTEMGSNPTELDQVNRRVMQLEIEESALKNESDNASKQRLQELQEELANEKEKQAALQSRVESEKEKIANLQEKRAQLDESRQALEDAQTNNNLEKAAELQYGTIPQLEKELRELEDNFQDEQGEDTDRMIREVVTDEEIGDIVSQWTGIPVSKLVETEREKLLHLSDILHKRVVGQDKAVDLVSDAVVRARAGIKDPNRPIGSFLFLGPTGVGKTELAKSLAASLFDSEKHMIRIDMSEYMEKHAVSRLIGAPPGYIGHDEGGQLTEAVRRNPYSVILLDEVEK 685
BLAST of FC873851 vs. ExPASy Swiss-Prot
Match: CLPB_RHOPA (Chaperone protein clpB OS=Rhodopseudomonas palustris GN=clpB PE=3 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 4.901e-67 Identity = 150/331 (45.32%), Postives = 195/331 (58.91%), Query Frame = 2 Query: 2 RYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEA--------------------------------------GSRVRL------------RHAQLPE----------EARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIER 814 +YE HH +R D ALV+A LS +YI+DRFLPDKAIDL+DEA GS+ RL + A L + +A++L+ EL + E A R ++++AGEL +I L K E+ E V VT I +VS WTG+PV+K+ E ++LL+MEE L +RV+GQ EAV A+S A+RRAR GL++PNRP+ SF+F GPTGVGK+EL KALA Y F E AM+R+DMSEFME+H+V++LIG+PPGYVGY EGG LTEAVRRRPY V+LFDEIE+ Sbjct: 358 KYEQHHGVRIADSALVAAVTLSNRYITDRFLPDKAIDLMDEAAARLKMQVDSKPEELDSMDREIVRLKIEQEALKKETDPGSKARLVTLEKELADLEEKSAALTQRWSAEKNKLSDAQKLKSELDALRIELANAQRRGEYQRAGELA------YGRIPELEKKIAEIEANENSGAMVEEAVTANHIAQVVSRWTGVPVDKMLEGEKEKLLRMEEQLGQRVVGQFEAVHAVSTAVRRARAGLQDPNRPMGSFMFLGPTGVGKTELTKALAEYLFDDETAMVRIDMSEFMEKHSVARLIGAPPGYVGYDEGGVLTEAVRRRPYQVILFDEIEK 682
BLAST of FC873851 vs. ExPASy Swiss-Prot
Match: CLPB_CHRVO (Chaperone protein clpB OS=Chromobacterium violaceum GN=clpB PE=3 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 4.901e-67 Identity = 148/330 (44.85%), Postives = 201/330 (60.91%), Query Frame = 2 Query: 2 RYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ-------ITKEKNEA-------VRGQDFEKAGELRD-------------------REMD-LKAQISALVDKGKEMSKAETE----------------AGDVGPV---------VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIER 814 +YEIHH + TD A+V+AA+LS +YI+DRFLPDKAIDLIDEA SR+++ PE +L++ L Q + KE +EA + + E + E D E+D LK + L KG AE + AGD G V +I +VS TGIPV K+ T E ++LLKME+ LH+RV+GQDEAV A++ AIRR+R GL +PN+P SF+F GPTGVGK+EL K LA++ F S++ +IR+DMSE+ME+H+V++LIG+PPGYVGY EGG LTE VRR+PY+V+L DE+E+ Sbjct: 356 KYEIHHGVDITDPAIVAAAELSQRYITDRFLPDKAIDLIDEAASRIKMELDSKPEAMDKLDRRLIQLKIEREAVNKESDEASQKRLKLIEDEIAELSREYADLEEIWKAEKAAQQGSQSIKEEIDRLKVDMEELKRKGDWQKLAELQYGKLPQLEARLKEAESAGDKGEAKPNRLLRTQVGAEEIAEVVSRATGIPVSKMLTGEREKLLKMEDVLHQRVVGQDEAVSAVADAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKTLASFLFDSKDHLIRIDMSEYMEKHSVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEK 685
BLAST of FC873851 vs. ExPASy Swiss-Prot
Match: HSP78_SCHPO (Heat shock protein 78, mitochondrial OS=Schizosaccharomyces pombe GN=hsp78 PE=2 SV=1) HSP 1 Score: 253.832 bits (647), Expect = 8.360e-67 Identity = 144/327 (44.04%), Postives = 199/327 (60.86%), Query Frame = 2 Query: 2 RYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD---FEKAGELRDREMDLKAQ---ISALVDKGKEM----SKAETEAGD----------------------------------------------VGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIER 814 RYE+HH +R TD+ALV+AA S +YI+DRFLPDKAIDL+DEA S +RL+ P+E R L++++ I E + D E+ +L + DLK + +SA ++ +++ KA+TE V VT DI +VS TGIP + E D+LL ME+T+ K++IGQDEA+KAI+ A+R +R GL+N NRP+ASF+F GPTGVGK+ L KALA + F +++AMIR DMSEF E+HT+++LIGSPPGY+GY E G+LTEAVRR+PY V+LFDE+E+ Sbjct: 289 RYEVHHGVRITDDALVTAATYSARYITDRFLPDKAIDLVDEACSSLRLQQESKPDELRRLDRQIMTIQIELESLRKETDTTSVERREKLESKLTDLKEEQDKLSAAWEEERKLLDSIKKAKTELEQARIELERTQREGNYARASELQYAIIPELERSVPKEEKTLEEKKPSMVHDSVTSDDIAVVVSRATGIPTTNLMRGERDKLLNMEQTIGKKIIGQDEALKAIADAVRLSRAGLQNTNRPLASFLFLGPTGVGKTALTKALAEFLFDTDKAMIRFDMSEFQEKHTIARLIGSPPGYIGYEESGELTEAVRRKPYAVLLFDELEK 615
BLAST of FC873851 vs. ExPASy Swiss-Prot
Match: CLPB_RICBR (Chaperone protein clpB OS=Rickettsia bellii (strain RML369-C) GN=clpB PE=3 SV=1) HSP 1 Score: 253.832 bits (647), Expect = 8.360e-67 Identity = 145/325 (44.62%), Postives = 203/325 (62.46%), Query Frame = 2 Query: 2 RYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEK-------ELRQITKEKNE--------------------------------AVRGQDFEKAGELRDREMDL-KAQISALVDKGKEMSKA----------ETEAGD----VGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIER 814 +YE+HH +R +D A+V+AA LS +YI+DRFLPDKAIDLIDEA SR+++ + PEE EL++ EL + KE +E ++GQ K EL +DL +A+ A + K E+ ETE D + +V+E DI I+S TGIP++ + + E +RLL ME+ L + VIGQDEA+K++S A+RR+R G+++ NRP+ SF+F GPTGVGK+EL KALA + F A++R+DMSE+ME+H +S+LIG+PPGYVGY +GG LTEAVRRRPY V+LFDE+E+ Sbjct: 357 KYELHHAVRISDSAIVAAATLSNRYITDRFLPDKAIDLIDEACSRMKIELSSKPEELDELDRRIIQIKIELAALKKESDEHSKKKIEHLTAELEKLESNSYDMSSKWQAEKSKIQGQQKLKE-ELDRARIDLERAERDANLAKASELKYGIIPEIMKKIQETENADSKGLLKEIVSESDIASIISRITGIPIDTMLSSERERLLVMEQKLRESVIGQDEAIKSVSDAVRRSRAGIQDINRPLGSFLFLGPTGVGKTELTKALAGFLFDDRNAILRIDMSEYMEKHAISRLIGAPPGYVGYDQGGVLTEAVRRRPYQVILFDEVEK 680
BLAST of FC873851 vs. ExPASy Swiss-Prot
Match: CLPB_BIFLO (Chaperone protein clpB OS=Bifidobacterium longum GN=clpB PE=3 SV=1) HSP 1 Score: 253.832 bits (647), Expect = 8.360e-67 Identity = 148/336 (44.05%), Postives = 204/336 (60.71%), Query Frame = 2 Query: 2 RYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD----------------------------------FEKAGELRDREMDLKAQISALVDKG-----------------KEMSKAET---EAGDVG-------PVVTE-VD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIER 814 RYE HHK+ D+ALV+AA LS +YIS R LPDKAIDL+DEA + +R+ PEE EL++++ ++ E+ + + +D K G+LR + DL+ Q +G KE++ AE+ E+ D P+V + VD + IVS WTGIPV ++ E+++LL ME+ L KRVIGQ EA+ A+S A+RR+R G+ +PNRP SF+F GPTGVGK+ELAKALA + F E+AM+R+DMSE+ME+ +VS+LIG+ PGYVGY +GGQLTEAVRRRPY+VVLFDE+E+ Sbjct: 357 RYEAHHKVTIGDDALVAAATLSNRYISGRQLPDKAIDLVDEAAAHLRMELDSSPEEIDELQRKVTRLEMEEMQLKKAEDPASKERLGKLQAELADTREKLSGLKARWDAEQAGHNKVGDLRAKLDDLRVQADKYTREGNLAEASKILYGEIPSIQKELAAAESADAESADASAANPADEPMVPDRVDADSVAEIVSDWTGIPVGRLMQGENEKLLHMEDYLGKRVIGQKEAIAAVSDAVRRSRAGISDPNRPTGSFLFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLIGAAPGYVGYEQGGQLTEAVRRRPYSVVLFDEVEK 692
BLAST of FC873851 vs. ExPASy Swiss-Prot
Match: CLPB_RICFE (Chaperone protein clpB OS=Rickettsia felis GN=clpB PE=3 SV=2) HSP 1 Score: 253.062 bits (645), Expect = 1.426e-66 Identity = 137/324 (42.28%), Postives = 198/324 (61.11%), Query Frame = 2 Query: 2 RYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD----------FEKAGELRDREMDLKAQISALVDKGKEMSKAETEA-------------------------------------------GDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIER 814 +YE+HH +R +D A+V+AA LS +YI+DR+LPDKAIDLIDEA SR+++ + PEE EL++ + QI E + D E+ +L + D+KA+ A K ++ K + E G + +V+E DI I+S TGIP++ + + E +RLL ME+ L + VIGQDEA+K +S A+RR+R G+++ NRP+ SF+F GPTGVGK+EL KALA++ F A++R+DMSE+ME+H +S+LIG+PPGY+GY +GG LTEAVRRRPY V+LFDE+E+ Sbjct: 357 KYELHHAVRISDSAIVAAATLSNRYITDRYLPDKAIDLIDEACSRMKIELSSKPEELDELDRRIIQIKIELAALKKENDEHSKKKITHLTEELEKLESKSYDMKAKWQAEKSKLQQAQKLKEELERARIDLERAERDANLAKASELKYGIIPEIMKKIQEAESMDNKGLLKEIVSESDIASIISRITGIPIDTMLSSERERLLVMEQKLRESVIGQDEAIKGVSDAVRRSRAGIQDINRPLGSFLFLGPTGVGKTELTKALASFLFDDRNAILRIDMSEYMEKHAISRLIGAPPGYIGYDQGGVLTEAVRRRPYQVILFDEVEK 680
BLAST of FC873851 vs. ExPASy Swiss-Prot
Match: CLPB_DICNO (Chaperone protein clpB OS=Dichelobacter nodosus GN=clpB PE=3 SV=2) HSP 1 Score: 252.677 bits (644), Expect = 1.863e-66 Identity = 142/327 (43.43%), Postives = 191/327 (58.41%), Query Frame = 2 Query: 2 RYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQ-----------------------ISALVDKGKEMSKAETEAGDVGPV---------------------------------VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIER 814 RYE+HH + TD ALV+AAQLS++YIS R LPDKAIDL+DEA +++R+ PE ++++ L Q+ E+ + D L D E ++ AQ I +DK + +A GD VT +I IVS WTGIPV K+ E +RLL +E L++RV+GQ AV+A++ AIRR R GL +P RPI SF+F GPTGVGK+EL + LA + F SEE M+R+DMSEFME+H+V++LIG+PPGYVGY +GG LTEAVRR+PY+VVLFDE+E+ Sbjct: 360 RYEVHHGINITDPALVAAAQLSHRYISGRKLPDKAIDLMDEAAAQIRMELDSKPEVMDKIDRRLIQLQIERMALEKETDAASKRRLSDLEAEIAAQEKEYADLEEIWLAEKAGNAGAAEIKEQLDKLRVELEAAKRRGDFARASEIQYGLIPAKEKQLLENEQQTEQRPHRLMRNKVTAEEIAEIVSRWTGIPVAKMMEGEKERLLHLETVLNERVVGQKTAVEAVANAIRRNRAGLSDPKRPIGSFLFLGPTGVGKTELCRTLAQFLFDSEENMVRIDMSEFMEKHSVARLIGAPPGYVGYDQGGYLTEAVRRKPYSVVLFDEVEK 686 The following BLAST results are available for this feature:
BLAST of FC873851 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 201
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873851 ID=FC873851; Name=FC873851; organism=Citrus clementina; type=EST; length=825bpback to top |