FC873851
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873851 vs. ExPASy Swiss-Prot
Match: CLPL_STAAM (ATP-dependent Clp protease ATP-binding subunit clpL OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=clpL PE=1 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 2.136e-54 Identity = 118/273 (43.22%), Postives = 171/273 (62.64%), Query Frame = 2 Query: 2 RYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAR-ELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQ-LTEAVRRRPYTVVLFDEIER 814 ++E HH+++ D+ L + LS QYI R LPDKAID++D + + AQ P + E EK + ++ +K +AV ++++KA D++ +I +L DK E G+ V T DI + TGIPV ++ ++ +RL + L ++IGQD+AV+ +SRAIRR R G + NRPI SF+F GPTGVGK+ELAK LA FG+++A+IRLDMSE+ + VSK+IG+ GYVGY + LTE VRR PY+V+LFDEIE+ Sbjct: 278 KFEEHHQVKLPDDVLKACVDLSIQYIPQRLLPDKAIDVLDITAAHLS---AQSPAVDKVETEKRISELENDKRKAVSAEEYKKAD-------DIQNEIKSLQDK------LENSNGEHTAVATVHDISDTIQRLTGIPVSQMDDNDIERLKNISNRLRSKIIGQDQAVEMVSRAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLAIDLFGNKDALIRLDMSEYSDTTAVSKMIGTTAGYVGYDDNSNTLTEKVRRNPYSVILFDEIEK 534
BLAST of FC873851 vs. ExPASy Swiss-Prot
Match: CLPL_STAAC (ATP-dependent Clp protease ATP-binding subunit clpL OS=Staphylococcus aureus (strain COL) GN=clpL PE=3 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 2.136e-54 Identity = 118/273 (43.22%), Postives = 171/273 (62.64%), Query Frame = 2 Query: 2 RYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAR-ELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQ-LTEAVRRRPYTVVLFDEIER 814 ++E HH+++ D+ L + LS QYI R LPDKAID++D + + AQ P + E EK + ++ +K +AV ++++KA D++ +I +L DK E G+ V T DI + TGIPV ++ ++ +RL + L ++IGQD+AV+ +SRAIRR R G + NRPI SF+F GPTGVGK+ELAK LA FG+++A+IRLDMSE+ + VSK+IG+ GYVGY + LTE VRR PY+V+LFDEIE+ Sbjct: 278 KFEEHHQVKLPDDVLKACVDLSIQYIPQRLLPDKAIDVLDITAAHLS---AQSPAVDKVETEKRISELENDKRKAVSAEEYKKAD-------DIQNEIKSLQDK------LENSNGEHTAVATVHDISDTIQRLTGIPVSQMDDNDIERLKNISNRLRSKIIGQDQAVEMVSRAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLAIDLFGNKDALIRLDMSEYSDTTAVSKMIGTTAGYVGYDDNSNTLTEKVRRNPYSVILFDEIEK 534
BLAST of FC873851 vs. ExPASy Swiss-Prot
Match: CLPL_STAA8 (ATP-dependent Clp protease ATP-binding subunit clpL OS=Staphylococcus aureus (strain NCTC 8325) GN=clpL PE=2 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 2.136e-54 Identity = 118/273 (43.22%), Postives = 171/273 (62.64%), Query Frame = 2 Query: 2 RYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAR-ELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQ-LTEAVRRRPYTVVLFDEIER 814 ++E HH+++ D+ L + LS QYI R LPDKAID++D + + AQ P + E EK + ++ +K +AV ++++KA D++ +I +L DK E G+ V T DI + TGIPV ++ ++ +RL + L ++IGQD+AV+ +SRAIRR R G + NRPI SF+F GPTGVGK+ELAK LA FG+++A+IRLDMSE+ + VSK+IG+ GYVGY + LTE VRR PY+V+LFDEIE+ Sbjct: 278 KFEEHHQVKLPDDVLKACVDLSIQYIPQRLLPDKAIDVLDITAAHLS---AQSPAVDKVETEKRISELENDKRKAVSAEEYKKAD-------DIQNEIKSLQDK------LENSNGEHTAVATVHDISDTIQRLTGIPVSQMDDNDIERLKNISNRLRSKIIGQDQAVEMVSRAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLAIDLFGNKDALIRLDMSEYSDTTAVSKMIGTTAGYVGYDDNSNTLTEKVRRNPYSVILFDEIEK 534
BLAST of FC873851 vs. ExPASy Swiss-Prot
Match: CLPL_STAA3 (ATP-dependent Clp protease ATP-binding subunit clpL OS=Staphylococcus aureus (strain USA300) GN=clpL PE=3 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 2.136e-54 Identity = 118/273 (43.22%), Postives = 171/273 (62.64%), Query Frame = 2 Query: 2 RYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAR-ELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQ-LTEAVRRRPYTVVLFDEIER 814 ++E HH+++ D+ L + LS QYI R LPDKAID++D + + AQ P + E EK + ++ +K +AV ++++KA D++ +I +L DK E G+ V T DI + TGIPV ++ ++ +RL + L ++IGQD+AV+ +SRAIRR R G + NRPI SF+F GPTGVGK+ELAK LA FG+++A+IRLDMSE+ + VSK+IG+ GYVGY + LTE VRR PY+V+LFDEIE+ Sbjct: 278 KFEEHHQVKLPDDVLKACVDLSIQYIPQRLLPDKAIDVLDITAAHLS---AQSPAVDKVETEKRISELENDKRKAVSAEEYKKAD-------DIQNEIKSLQDK------LENSNGEHTAVATVHDISDTIQRLTGIPVSQMDDNDIERLKNISNRLRSKIIGQDQAVEMVSRAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLAIDLFGNKDALIRLDMSEYSDTTAVSKMIGTTAGYVGYDDNSNTLTEKVRRNPYSVILFDEIEK 534
BLAST of FC873851 vs. ExPASy Swiss-Prot
Match: CLPL_STAAR (ATP-dependent Clp protease ATP-binding subunit clpL OS=Staphylococcus aureus (strain MRSA252) GN=clpL PE=3 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 2.790e-54 Identity = 115/272 (42.28%), Postives = 169/272 (62.13%), Query Frame = 2 Query: 2 RYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQ-LTEAVRRRPYTVVLFDEIER 814 ++E HH+++ D+ L + LS QYI R LPDKAID++D + + + + + E K + ++ +K +AV ++++KA D++ +I +L DK E G+ V T DI + TGIPV ++ ++ +RL + L ++IGQD+AV+ +SRAIRR R G + NRPI SF+F GPTGVGK+ELAK LA FG++EA+IRLDMSE+ + VSK+IG+ GYVGY + LTE VRR PY+V+LFDEIE+ Sbjct: 278 KFETHHQVKLPDDVLKACVDLSIQYIPQRLLPDKAIDVLDITAAHLSAQSPAIDKVTTE--KRISELEHDKRKAVSAEEYKKAD-------DIQKEIKSLQDK------LENSNGEHTAVATVHDISDTIQRLTGIPVSQMDANDIERLKNISSRLRSKIIGQDKAVEMVSRAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLAIDLFGNKEALIRLDMSEYSDTTAVSKMIGTTAGYVGYDDNSNTLTEKVRRNPYSVILFDEIEK 534
BLAST of FC873851 vs. ExPASy Swiss-Prot
Match: CLPC_STRP6 (Probable ATP-dependent Clp protease ATP-binding subunit OS=Streptococcus pyogenes serotype M6 GN=clpC PE=1 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 6.871e-53 Identity = 123/271 (45.39%), Postives = 158/271 (58.30%), Query Frame = 2 Query: 5 YEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQ-LTEAVRRRPYTVVLFDEIER 814 YE HH + D L +A S QYI R LPDKAIDL+D + + +H + + LE E+ + + + +AV +DFEKA + R L+ QI E T DI V TGIPV + T++ +RL + L VIGQDEAV A++RAIRR R G + NRPI SF+F GPTGVGK+ELAK LA FGS++A+IRLDMSE+ +R VSKLIG+ GYVGY + LTE VRR PY +VL DEIE+ Sbjct: 274 YEQHHHITLPDNVLKAAVDYSIQYIPQRSLPDKAIDLLDMTAAHLAAQHPVT--DLKTLETEIAKQKESQEKAVAKEDFEKALAAKTRIETLQKQI-------------EQHNQSQNVTATVNDIAESVERLTGIPVSNMRTNDLERLKGISSRLKSHVIGQDEAVAAVARAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLALDLFGSKDAIIRLDMSEYNDRTAVSKLIGTTAGYVGYDDNNNTLTERVRRNPYAIVLLDEIEK 529
BLAST of FC873851 vs. ExPASy Swiss-Prot
Match: CLPV1_PSEAE (Protein clpV1 OS=Pseudomonas aeruginosa GN=clpV1 PE=1 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.751e-48 Identity = 117/329 (35.56%), Postives = 177/329 (53.80%), Query Frame = 2 Query: 8 EIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARE-------LEKELRQITKEKN------------EAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVG-----------------------------------------PVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIER 814 E HH+++ DEAL +A +LS++YI R LPDK++ L+D A +R + +P E + LE EL I +E E + ++ E+ L R + K + L++ + +A EA D G P V + +V+ WTGIPV +++ +E + +L ++ L KR+IGQD A++ I++ I+ +R GL NP++PI F+ +G +GVGK+E A ALA +G E+ +I ++MSEF E HTVS L G+PPGY+GY EGG LTEAVRR+PY+VVL DE+E+ Sbjct: 389 EKHHQVQILDEALEAAVRLSHRYIPARQLPDKSVSLLDTACARTAISLHAVPAEVDDSRRRIEALETELAIIRRESAIGVATAERQRNAETLLAEERERLAALEQRWAEEKRLVDELLETRARL-RAAAEAVDAGGVPLGEGEVRLDEEQRQALHARLAELQAQLSALQGEEPLILPTVDYQAVASVVADWTGIPVGRMARNEIETVLNLDRHLKKRIIGQDHALEMIAKRIQTSRAGLDNPSKPIGVFMLAGTSGVGKTETALALAEAMYGGEQNVITINMSEFQEAHTVSTLKGAPPGYIGYGEGGVLTEAVRRKPYSVVLLDEVEK 716
BLAST of FC873851 vs. ExPASy Swiss-Prot
Match: CLPL_LACLA (ATP-dependent Clp protease ATP-binding subunit clpL OS=Lactococcus lactis subsp. lactis GN=clpL PE=3 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 9.610e-47 Identity = 106/271 (39.11%), Postives = 156/271 (57.56%), Query Frame = 2 Query: 5 YEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQ-LTEAVRRRPYTVVLFDEIER 814 YE HH + D+ +A S +YI +R LPDKAIDLID+ GS + L++ L+ + + A++ +DF KA +++ + K +I K K + + D+ V TGIPV + ++ + L +++ L VIG+DEAVK +++AIRR R G ++P SF+F GPTGVGK+EL++ALA FG+E A+ +DMSE+ +R VSKLIG+ GYVGY + LTE VRR PY+V+L DEIE+ Sbjct: 334 YEKHHHVVLPDDEKKAAVDYSIKYIHNRHLPDKAIDLIDDCGS---FSGKNSQTDVETLDQRLKNKRQLRRPAIKSEDFAKAADIKRVDRGTKQKIKKTHQKEKITATID-------------DVAQSVERLTGIPVSDMGANDIEHLKNLDKRLKVMVIGEDEAVKMVAKAIRRNRAGFSEGDQPKGSFLFVGPTGVGKTELSQALALDMFGNENALFGIDMSEYADRTAVSKLIGTSAGYVGYEDNANTLTERVRRNPYSVILLDEIEK 588
BLAST of FC873851 vs. ExPASy Swiss-Prot
Match: CLPB_YEREN (Chaperone protein clpB OS=Yersinia enterocolitica GN=clpB PE=3 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.388e-45 Identity = 118/316 (37.34%), Postives = 170/316 (53.80%), Query Frame = 2 Query: 8 EIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLK-AQISALVDKGKEMSKAETEA------------------------------------------GDVGPVV-TEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIER 814 E HH + DEAL +A +LS++YI R LPDKAI L+D A +RV + P E ++L + E + + Q F K + R ++ AQ SA +K ++ +AE E P+V EV+ I +IV+ WTGI V ++ D+ ++++ + L +RVIGQ A+ +S I AR G+ +P +P+ F+ GP+GVGK+E A A+A +G E+ +I ++MSE+ E HTVS L GSPPGYVGY EGG LTEAVRR+PY+VVL DEIE+ Sbjct: 387 EKHHGVWIMDEALQAAVRLSHRYIPARQLPDKAISLLDTACARVAVAQFSQPAELQQLTFQSETAQTELSSLEKAQHFGKGQDERTALLEATIAQHSAAANKLEQRWQAERELVTAITATRTVLYELVSQPTPDEEKRQQYQQQLAQLEEQLLLIRSAQPLVQAEVNATVIANIVADWTGIQVGQMLKDDIRAVMELPQRLEERVIGQPHALVQLSENIMTARAGMADPRKPLGVFMLVGPSGVGKTETALAIAESMYGGEQNLITINMSEYQESHTVSSLKGSPPGYVGYGEGGVLTEAVRRKPYSVVLLDEIEK 702
BLAST of FC873851 vs. ExPASy Swiss-Prot
Match: HS104_YEAST (Heat shock protein 104 OS=Saccharomyces cerevisiae GN=HSP104 PE=1 SV=2) HSP 1 Score: 181.03 bits (458), Expect = 6.887e-45 Identity = 116/334 (34.73%), Postives = 173/334 (51.80%), Query Frame = 2 Query: 2 RYEIHHKLRYTDEALVSAAQLSYQYISDRFLPD--------------------------------------KAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG-----QDFEKAGELRDREMD--------------------LKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIER 814 +YEIHH +R D ALV+AAQL+ +Y+ R LPD KA++ ++A S + R ++ L++EL + + NE G Q +K EL ++ +D +K QI L D+ E + + VV I + TGIPV+K+S E+++L+ ME L V+GQ +A+KA+S A+R +R GL NP +P ASF+F G +G GK+ELAK +A + F E+ MIR+D SE E++ VSKL+G+ GYVGY EGG LT ++ +PY+V+LFDE+E+ Sbjct: 358 KYEIHHGVRILDSALVTAAQLAKRYLPYRRLPDSALDLVDISCAGVAVARDSKPEELDSKERQLQLIQVEIKALERDEDADSTTKDRLKLARQKEASLQEELEPLRQRYNEEKHGHEELTQAKKKLDELENKALDAERRYDTATAADLRYFAIPDIKKQIEKLEDQVAEEERRAGANSMIQNVVDSDTISETAARLTGIPVKKLSESENEKLIHMERDLSSEVVGQMDAIKAVSNAVRLSRSGLANPRQP-ASFLFLGLSGSGKTELAKKVAGFLFNDEDMMIRVDCSELSEKYAVSKLLGTTAGYVGYDEGGFLTNQLQYKPYSVLLFDEVEK 690 The following BLAST results are available for this feature:
BLAST of FC873851 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 201
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873851 ID=FC873851; Name=FC873851; organism=Citrus clementina; type=EST; length=825bpback to top |