FC873870
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873870 vs. ExPASy Swiss-Prot
Match: BH069_ARATH (Transcription factor bHLH69 OS=Arabidopsis thaliana GN=BHLH69 PE=2 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 2.056e-16 Identity = 49/79 (62.03%), Postives = 59/79 (74.68%), Query Frame = 1 Query: 466 SQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 702 +QP PK VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ QV+ LSM Sbjct: 122 AQPQTKPK-----VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKT-DKASMLDEIIDYVKFLQLQVKVLSM 194
BLAST of FC873870 vs. ExPASy Swiss-Prot
Match: UNE12_ARATH (Transcription factor UNE12 OS=Arabidopsis thaliana GN=UNE12 PE=2 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 2.273e-15 Identity = 51/122 (41.80%), Postives = 72/122 (59.02%), Query Frame = 1 Query: 337 GNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 702 G+G+G R +D D + S + H + P S P P VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A ++DEI++Y++ L+ QV+ LSM Sbjct: 100 GHGSGKRFSD-DVVDNRCSSMKPVFHGQPMQQPPPSA---------PHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKT-DRAAMIDEIVDYVKFLRLQVKVLSM 210
BLAST of FC873870 vs. ExPASy Swiss-Prot
Match: PIF1_ARATH (Transcription factor PIF1 OS=Arabidopsis thaliana GN=PIF1 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.282e-14 Identity = 65/210 (30.95%), Postives = 102/210 (48.57%), Query Frame = 1 Query: 175 KGAHFGQHLSQFGTNREVSGDDPVNLEHKMAHGNGVRKRRDVEDESAKHVSTSSGNGNGNRVNDS---DGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRA-------------RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNTRMNPGIEVFSP 756 +G G LS+ RE + P A +G+ +R D D SA +G G NR + I+ +G+ + SK+E EP ++ + E D R+ +R +A + H+L+ER RR++I+ERMK LQ+L+P CNK KA +LDE I Y++SLQ Q++ +SM + M PG++ + P Sbjct: 159 RGGESGPLLSK-AVVRESTQVSPSATPSAAASESGLTRRTDGTDSSAV-----AGGGAYNRKGKAVAMTAPAIEITGT-SSSVVSKSEIEPEKTNVDDRKRKEREATTTDETESRSEETKQARVSTTSTKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQMMSMGC-GMMPMMYPGMQQYMP 359
BLAST of FC873870 vs. ExPASy Swiss-Prot
Match: PIF3_ARATH (Transcription factor PIF3 OS=Arabidopsis thaliana GN=PIF3 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.247e-13 Identity = 49/138 (35.51%), Postives = 78/138 (56.52%), Query Frame = 1 Query: 289 RRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 702 R+D E E A V +S G+GN DG S S H + + + S E++ + + ++R ++ + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y++SLQ QV+ +SM Sbjct: 271 RKDQESEKAV-VCSSVGSGNS-----LDGPSESPSLSLKRKHSNIQDIDCHSEDVEEESGDGRKEAGPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKSLQLQVQIMSM 401
BLAST of FC873870 vs. ExPASy Swiss-Prot
Match: BH119_ARATH (Transcription factor bHLH119 OS=Arabidopsis thaliana GN=BHLH119 PE=2 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.801e-12 Identity = 41/129 (31.78%), Postives = 74/129 (57.36%), Query Frame = 1 Query: 316 KHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 702 K V+T + + + VN ++ +R++ R E + + K E+ + ++ + +R +A D H+L+ER RRE+I+ERMK LQ+L+P C K K +L+++I Y++SLQ Q++ +SM Sbjct: 296 KEVATETAGTSYSGVNKAETERVQIQPER--------ETKITEDKKREETIAEIQGTEEAHGSTSRKRSRAADMHNLSERRRRERINERMKTLQELLPRCRKT-DKVSMLEDVIEYVKSLQLQIQMMSM 415
BLAST of FC873870 vs. ExPASy Swiss-Prot
Match: SPT_ARATH (Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.012e-12 Identity = 45/130 (34.62%), Postives = 73/130 (56.15%), Query Frame = 1 Query: 334 SGNGNGNRVN-DSDGKRIKTS-----GSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 705 SG GN N V +S G R+ +S G+ D + ++E +V +S+ + ++R +A + H+L+E+ RR +I+E+MK LQ L+P NK KA +LDE I Y++ LQ QV+ L+M+ Sbjct: 133 SGGGNNNNVQGNSSGTRVSSSSVGASGNETDEYDCESEEGGEAVVDEAPSSKSGPSSRSS-----SKRCRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLTMR 256
BLAST of FC873870 vs. ExPASy Swiss-Prot
Match: PIF4_ARATH (Transcription factor PIF4 OS=Arabidopsis thaliana GN=PIF4 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.240e-12 Identity = 48/157 (30.57%), Postives = 83/157 (52.87%), Query Frame = 1 Query: 247 NLEHKMAHGNGVRKRRDVEDESAKHVSTSSGNGNGNRVND-----SDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 702 +L+ M+H + +++E++ + S+SSG +G + G+ I T R +H+ S + N + RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K KA +LDE I+Y++SLQ Q++ + M Sbjct: 174 DLDVSMSHD----RSKNIEEKLNPNASSSSGGSSGCSFGKDIKEMASGRCITTDRKRKRINHTDESVSLSDAIGNKSNQRSGSN----------RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKT-DKASILDEAIDYLKSLQLQLQVMWM 315
BLAST of FC873870 vs. ExPASy Swiss-Prot
Match: PIF5_ARATH (Transcription factor PIF5 OS=Arabidopsis thaliana GN=PIF5 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.397e-11 Identity = 47/155 (30.32%), Postives = 81/155 (52.26%), Query Frame = 1 Query: 316 KHVSTSSGNGNGNRVNDSDGKRIK-TSGSRDDNHHSKAEAEPSSVKPAEQNSQPPEPP----KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM-------KLEAVNTRMNPGIE 744 + + TSSG +G ++ + + TS + D +A+ SV ++ + K RR +A + H+L+ER RR++I+ERMK LQ+L+P C++ KA +LDE I+Y++SLQ Q++ + M A + M PG++ Sbjct: 182 ERLDTSSGGSSGCSYGRNNKETVSGTSVTIDRKRKHVMDADQESVSQSDIGLTSTDDQTMGNKSSQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRT-DKASILDEAIDYLKSLQMQLQVMWMGSGMAAAAAAAASPMMFPGVQ 335 The following BLAST results are available for this feature:
BLAST of FC873870 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873870 ID=FC873870; Name=FC873870; organism=Citrus clementina; type=EST; length=766bpback to top |