FC875283

Overview
NameFC875283
Unique NameFC875283
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length689
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875283 vs. ExPASy Swiss-Prot
Match: TDH_KLEP3 (L-threonine 3-dehydrogenase OS=Klebsiella pneumoniae (strain 342) GN=tdh PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.853e-30
Identity = 69/190 (36.32%), Postives = 111/190 (58.42%), Query Frame = 1
Query:  106 PSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLG-SPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKNL 672
            P +G  D+L++++   +CG+DVH       +   +  PMV+GHE  G +  +G EV+    GDRV+ E  I+C  C  C+ GR +LC  + G+G + P  GC A  +V PA   FK+PDN+S +  ++ +P    VH     ++  E +VL+ G+GPIG++    A+  GA  +VI DV++YRL +A+ +
Sbjct:   21 PEVGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVRGFKIGDRVSGEGHITCGHCRNCRAGRTHLCRNTIGVGVNRP--GCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGVMAAAVAKHVGARNVVITDVNEYRLELARKM 207          
BLAST of FC875283 vs. ExPASy Swiss-Prot
Match: TDH_IDILO (L-threonine 3-dehydrogenase OS=Idiomarina loihiensis GN=tdh PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.853e-30
Identity = 73/193 (37.82%), Postives = 111/193 (57.51%), Query Frame = 1
Query:   97 LELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLG-SPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKNL 672
            +E P  G  D+L+++K   +CG+DVH  K    +   +  PMV+GHE  G +  +G  V+    GDRV+ E  I+C  C  C+ GR +LC  + G+G + P  G  A  +  PA+  FKLPD+V+ E  A+ +P    VH     ++  E +VLI G+GPIG++    AR  GA  +VI DV++YRL +A+ +
Sbjct:   18 VEKPECGYNDLLIKIKKTAICGTDVHIYKWDDWSQKTIPVPMVVGHEYVGEVAAMGDGVRGFEIGDRVSGEGHITCGHCRNCRAGRRHLCRNTYGVGVNRP--GAFAEYLALPAENAFKLPDDVTDEMAAVFDPFGNAVHTALAFDLVGE-DVLITGAGPIGIMAAAVARHVGARHVVITDVNEYRLDLARKM 207          
BLAST of FC875283 vs. ExPASy Swiss-Prot
Match: TDH_FRATW (L-threonine 3-dehydrogenase OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=tdh PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.853e-30
Identity = 71/194 (36.60%), Postives = 113/194 (58.25%), Query Frame = 1
Query:   88 IQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKN 669
            I    +P  G  DVL+++K   +CG+D+H     + +   +  PM+ GHE AG +   G  V ++  GDRV+ E  + C QC  C+ G+ +LC ++ G+G   V G  A  +V PA   FK+PD++S +  +  +P+   +H     N+  E +VLI G+GPIGL+ +  AR  GA RIVI D+++YRL +A++
Sbjct:   16 INDAPIPEYGYNDVLIKIKKTAICGTDLHIYNWDKWSQNTIPVPMITGHEFAGEVVAKGDGVTSVDIGDRVSGEGHLVCGQCRNCRAGKRHLCRKTIGIG-VNVQGAFAEYLVMPAVNVFKIPDSISDDIASTFDPMGNAIHTALSFNLTGE-DVLITGAGPIGLMAVKIARFCGARRIVITDINEYRLQMARD 207          
BLAST of FC875283 vs. ExPASy Swiss-Prot
Match: TDH_FRATT (L-threonine 3-dehydrogenase OS=Francisella tularensis subsp. tularensis GN=tdh PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.853e-30
Identity = 71/194 (36.60%), Postives = 113/194 (58.25%), Query Frame = 1
Query:   88 IQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKN 669
            I    +P  G  DVL+++K   +CG+D+H     + +   +  PM+ GHE AG +   G  V ++  GDRV+ E  + C QC  C+ G+ +LC ++ G+G   V G  A  +V PA   FK+PD++S +  +  +P+   +H     N+  E +VLI G+GPIGL+ +  AR  GA RIVI D+++YRL +A++
Sbjct:   16 INDAPIPEYGYNDVLIKIKKTAICGTDLHIYNWDKWSQNTIPVPMITGHEFAGEVVAKGDGVTSVDIGDRVSGEGHLVCGQCRNCRAGKRHLCRKTIGIG-VNVQGAFAEYLVMPAVNVFKIPDSISDDIASTFDPMGNAIHTALSFNLTGE-DVLITGAGPIGLMAVKIARFCGARRIVITDINEYRLQMARD 207          
BLAST of FC875283 vs. ExPASy Swiss-Prot
Match: TDH_FRATO (L-threonine 3-dehydrogenase OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=tdh PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.853e-30
Identity = 71/194 (36.60%), Postives = 113/194 (58.25%), Query Frame = 1
Query:   88 IQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKN 669
            I    +P  G  DVL+++K   +CG+D+H     + +   +  PM+ GHE AG +   G  V ++  GDRV+ E  + C QC  C+ G+ +LC ++ G+G   V G  A  +V PA   FK+PD++S +  +  +P+   +H     N+  E +VLI G+GPIGL+ +  AR  GA RIVI D+++YRL +A++
Sbjct:   16 INDAPIPEYGYNDVLIKIKKTAICGTDLHIYNWDKWSQNTIPVPMITGHEFAGEVVAKGDGVTSVDIGDRVSGEGHLVCGQCRNCRAGKRHLCRKTIGIG-VNVQGAFAEYLVMPAVNVFKIPDSISDDIASTFDPMGNAIHTALSFNLTGE-DVLITGAGPIGLMAVKIARFCGARRIVITDINEYRLQMARD 207          
BLAST of FC875283 vs. ExPASy Swiss-Prot
Match: TDH_FRATN (L-threonine 3-dehydrogenase OS=Francisella tularensis subsp. novicida (strain U112) GN=tdh PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.853e-30
Identity = 71/194 (36.60%), Postives = 113/194 (58.25%), Query Frame = 1
Query:   88 IQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKN 669
            I    +P  G  DVL+++K   +CG+D+H     + +   +  PM+ GHE AG +   G  V ++  GDRV+ E  + C QC  C+ G+ +LC ++ G+G   V G  A  +V PA   FK+PD++S +  +  +P+   +H     N+  E +VLI G+GPIGL+ +  AR  GA RIVI D+++YRL +A++
Sbjct:   16 IDDAPIPEYGYNDVLIKIKKTAICGTDLHIYNWDKWSQNTIPVPMITGHEFAGEVVAKGDGVTSVDIGDRVSGEGHLVCGQCRNCRAGKRHLCRKTIGIG-VNVQGAFAEYLVMPAVNVFKIPDSISDDIASTFDPMGNAIHTALSFNLTGE-DVLITGAGPIGLMAVKIARFCGARRIVITDINEYRLQMARD 207          
BLAST of FC875283 vs. ExPASy Swiss-Prot
Match: TDH_FRATM (L-threonine 3-dehydrogenase OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=tdh PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.853e-30
Identity = 71/194 (36.60%), Postives = 113/194 (58.25%), Query Frame = 1
Query:   88 IQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKN 669
            I    +P  G  DVL+++K   +CG+D+H     + +   +  PM+ GHE AG +   G  V ++  GDRV+ E  + C QC  C+ G+ +LC ++ G+G   V G  A  +V PA   FK+PD++S +  +  +P+   +H     N+  E +VLI G+GPIGL+ +  AR  GA RIVI D+++YRL +A++
Sbjct:   16 INDAPIPEYGYNDVLIKIKKTAICGTDLHIYNWDKWSQNTIPVPMITGHEFAGEVVAKGDGVTSVDIGDRVSGEGHLVCGQCRNCRAGKRHLCRKTIGIG-VNVQGAFAEYLVMPAVNVFKIPDSISDDIASTFDPMGNAIHTALSFNLTGE-DVLITGAGPIGLMVVKIARFCGARRIVITDINEYRLQMARD 207          
BLAST of FC875283 vs. ExPASy Swiss-Prot
Match: TDH_FRATH (L-threonine 3-dehydrogenase OS=Francisella tularensis subsp. holarctica (strain LVS) GN=tdh PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.853e-30
Identity = 71/194 (36.60%), Postives = 113/194 (58.25%), Query Frame = 1
Query:   88 IQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKN 669
            I    +P  G  DVL+++K   +CG+D+H     + +   +  PM+ GHE AG +   G  V ++  GDRV+ E  + C QC  C+ G+ +LC ++ G+G   V G  A  +V PA   FK+PD++S +  +  +P+   +H     N+  E +VLI G+GPIGL+ +  AR  GA RIVI D+++YRL +A++
Sbjct:   16 INDAPIPEYGYNDVLIKIKKTAICGTDLHIYNWDKWSQNTIPVPMITGHEFAGEVVAKGDGVTSVDIGDRVSGEGHLVCGQCRNCRAGKRHLCRKTIGIG-VNVQGAFAEYLVMPAVNVFKIPDSISDDIASTFDPMGNAIHTALSFNLTGE-DVLITGAGPIGLMAVKIARFCGARRIVITDINEYRLQMARD 207          
BLAST of FC875283 vs. ExPASy Swiss-Prot
Match: TDH_FRATF (L-threonine 3-dehydrogenase OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=tdh PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.853e-30
Identity = 71/194 (36.60%), Postives = 113/194 (58.25%), Query Frame = 1
Query:   88 IQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKN 669
            I    +P  G  DVL+++K   +CG+D+H     + +   +  PM+ GHE AG +   G  V ++  GDRV+ E  + C QC  C+ G+ +LC ++ G+G   V G  A  +V PA   FK+PD++S +  +  +P+   +H     N+  E +VLI G+GPIGL+ +  AR  GA RIVI D+++YRL +A++
Sbjct:   16 INDAPIPEYGYNDVLIKIKKTAICGTDLHIYNWDKWSQNTIPVPMITGHEFAGEVVAKGDGVTSVDIGDRVSGEGHLVCGQCRNCRAGKRHLCRKTIGIG-VNVQGAFAEYLVMPAVNVFKIPDSISDDIASTFDPMGNAIHTALSFNLTGE-DVLITGAGPIGLMAVKIARFCGARRIVITDINEYRLQMARD 207          
BLAST of FC875283 vs. ExPASy Swiss-Prot
Match: TDH_FRAT1 (L-threonine 3-dehydrogenase OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=tdh PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.853e-30
Identity = 71/194 (36.60%), Postives = 113/194 (58.25%), Query Frame = 1
Query:   88 IQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKN 669
            I    +P  G  DVL+++K   +CG+D+H     + +   +  PM+ GHE AG +   G  V ++  GDRV+ E  + C QC  C+ G+ +LC ++ G+G   V G  A  +V PA   FK+PD++S +  +  +P+   +H     N+  E +VLI G+GPIGL+ +  AR  GA RIVI D+++YRL +A++
Sbjct:   16 INDAPIPEYGYNDVLIKIKKTAICGTDLHIYNWDKWSQNTIPVPMITGHEFAGEVVAKGDGVTSVDIGDRVSGEGHLVCGQCRNCRAGKRHLCRKTIGIG-VNVQGAFAEYLVMPAVNVFKIPDSISDDIASTFDPMGNAIHTALSFNLTGE-DVLITGAGPIGLMAVKIARFCGARRIVITDINEYRLQMARD 207          
The following BLAST results are available for this feature:
BLAST of FC875283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 323
Match NameE-valueIdentityDescription
TDH_KLEP37.853e-3036.32L-threonine 3-dehydrogenase OS=Klebsiella pneumoni... [more]
TDH_IDILO7.853e-3037.82L-threonine 3-dehydrogenase OS=Idiomarina loihiens... [more]
TDH_FRATW7.853e-3036.60L-threonine 3-dehydrogenase OS=Francisella tularen... [more]
TDH_FRATT7.853e-3036.60L-threonine 3-dehydrogenase OS=Francisella tularen... [more]
TDH_FRATO7.853e-3036.60L-threonine 3-dehydrogenase OS=Francisella tularen... [more]
TDH_FRATN7.853e-3036.60L-threonine 3-dehydrogenase OS=Francisella tularen... [more]
TDH_FRATM7.853e-3036.60L-threonine 3-dehydrogenase OS=Francisella tularen... [more]
TDH_FRATH7.853e-3036.60L-threonine 3-dehydrogenase OS=Francisella tularen... [more]
TDH_FRATF7.853e-3036.60L-threonine 3-dehydrogenase OS=Francisella tularen... [more]
TDH_FRAT17.853e-3036.60L-threonine 3-dehydrogenase OS=Francisella tularen... [more]

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Properties
Property NameValue
Genbank descriptionC31402C03EF CTVClemen1 Citrus clementina cDNA clone C31402C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875283 ID=FC875283; Name=FC875283; organism=Citrus clementina; type=EST; length=689bp
GGCAAGGGAGGGATGTCACAAGGAGAAAAGGAAGATGGAGAAGAAGTTAA
CATGGCAGCTTGGCTTATGGGTGTCAACACCCTCAAGATTCAGCCTTTGG
AGCTTCCTTCTCTGGGACCTTATGATGTTTTAGTCAGGATGAAAGCCGTT
GGTGTTTGTGGAAGTGATGTGCATTTTCTCAAGACCTTGAGGCTTGCCGA
TTTTGTAGTGAAAGAGCCTATGGTGATCGGGCATGAGTGTGCTGGGGTCA
TAGAGAAGGTGGGAAGCGAGGTGAAGACTTTGGTGCCCGGTGACCGTGTG
GCCCTGGAACCAGGGATCAGCTGCTGGCAATGTGATTACTGCAAAGGAGG
TCGATACAATTTGTGTCCAGAGTCGAAAGGTCTTGGAAGTCCGCCAGTTC
ATGGTTGTCTGGCTAATCAGGTGGTGCATCCTGCAGACCTATGTTTTAAG
CTGCCCGACAATGTCAGCCTGGAGGAAGGGGCTATGTGTGAGCCCTTGAG
TGTTGGTGTTCATGCCTGCCGCCGTGCCAATATCGGTCCTGAGACAAATG
TGCTTATCATGGGATCAGGGCCCATAGGACTTGTCACAATGCTAGGAGCT
CGTGCTTTTGGAGCTCCTAGAATTGTCATTGTGGATGTGGATGACTATCG
TTTATCTGTTGCAAAGAACTTGGTGCAGATAATATTGTT
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