FC875283
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875283 vs. ExPASy Swiss-Prot
Match: TDH_PARUW (L-threonine 3-dehydrogenase OS=Protochlamydia amoebophila (strain UWE25) GN=tdh PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.898e-29 Identity = 79/198 (39.90%), Postives = 112/198 (56.57%), Query Frame = 1 Query: 82 LKIQPLELPS-LGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKNL 672 L ++ L +PS + +VL++ +CG+DVH K A V P+VIGHE G I + G VK G+RV E I C QC C+ GR ++C +KGLG + GC A V PA+ F LP ++S + GA+ +P VH N+ E +VLI G+GPIG++ A+ GA IVI DV+DYRL +A+ + Sbjct: 13 LWMENLPIPSHVKDDEVLIKTIKTSICGTDVHIYKWDAWAQKNVPVPLVIGHEFIGEIAEFGKNVKGFKIGERVCGEGHIVCNQCPNCRMGRKHVCMHTKGLGY-HISGCFAEYFVLPAENVFSLPPSISDDLGAIFDPYGNAVHTTLAFNLIGE-DVLITGAGPIGIMAAAIAKQAGARHIVITDVNDYRLDLARTM 208
BLAST of FC875283 vs. ExPASy Swiss-Prot
Match: TDH_CHRVO (L-threonine 3-dehydrogenase OS=Chromobacterium violaceum GN=tdh PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.898e-29 Identity = 70/197 (35.53%), Postives = 112/197 (56.85%), Query Frame = 1 Query: 82 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKNL 672 L++ + LP +G D+L+++ +CG+D+H + + PM +GHE GV+ +GSEV+ G RV+ E I+C C C+ GR +LC + G+G G A +V PA F +PD++S + ++ +P VH N+ E +VLI G+GPIG++ + A+ GA +VI DV+DYRL +AK + Sbjct: 13 LEMTDVPLPEVGHNDLLIKIVKTAICGTDIHIWNWDEWSQKTIPVPMHVGHEYVGVVAGMGSEVQGFKIGQRVSGEGHITCGYCRNCRAGRRHLCRNTTGVGVNR-EGAFAEYLVIPAFNAFPIPDDISDDLASIFDPFGNAVHTALSFNLVGE-DVLITGAGPIGIMAVAIAKHVGARHVVITDVNDYRLELAKKM 207
BLAST of FC875283 vs. ExPASy Swiss-Prot
Match: TDH_SHEAM (L-threonine 3-dehydrogenase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=tdh PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.090e-29 Identity = 68/189 (35.98%), Postives = 107/189 (56.61%), Query Frame = 1 Query: 106 PSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKNL 672 P +G D+L++++ +CG+DVH + + PMV+GHE G + +G EV+ GDRV+ E I+C C C+ GR +LC + G+G G A +V PA FK+PD++S + A+ +P VH ++ E +VLI G+GPIG++ R GA +VI DV++YRL +A+ + Sbjct: 21 PEMGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVRGFKIGDRVSGEGHITCGHCRNCRAGRTHLCRNTTGVGVNR-EGSFAEYLVIPAFNAFKIPDDISDDLAAIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVCRHVGARHVVITDVNEYRLELARKM 207
BLAST of FC875283 vs. ExPASy Swiss-Prot
Match: TDH_BURXL (L-threonine 3-dehydrogenase OS=Burkholderia xenovorans (strain LB400) GN=tdh PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.090e-29 Identity = 71/197 (36.04%), Postives = 110/197 (55.84%), Query Frame = 1 Query: 82 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKNL 672 L + ++ P +G DV++R+ +CG+D+H K A + PM +GHE G I ++G EV+ GDRV+ E I+C C C+ GR +LC + G+G G A +V PA FK+P +S + A+ +P H N+ E +VLI G+GPIG++ + A+ GA +VI DV+DYRL +A+ + Sbjct: 13 LTLTDVKKPEVGHNDVMIRITRTAICGTDIHIWKWDDWAQKTIPVPMHVGHEYVGEIVEMGQEVRGFAIGDRVSGEGHITCGFCRNCRAGRRHLCRNTVGVGVNR-EGAFAEYLVIPAFNAFKIPPEISDDLAAIFDPFGNATHTALSFNLVGE-DVLITGAGPIGIMAVAIAKHVGARNVVITDVNDYRLELARKM 207
BLAST of FC875283 vs. ExPASy Swiss-Prot
Match: TDH_BURPP (L-threonine 3-dehydrogenase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=tdh PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.090e-29 Identity = 71/197 (36.04%), Postives = 110/197 (55.84%), Query Frame = 1 Query: 82 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKNL 672 L + ++ P +G DV++R+ +CG+D+H K A + PM +GHE G I ++G EV+ GDRV+ E I+C C C+ GR +LC + G+G G A +V PA FK+P +S + A+ +P H N+ E +VLI G+GPIG++ + A+ GA +VI DV+DYRL +A+ + Sbjct: 13 LTLTDVKKPEVGHNDVMIRITRTAICGTDIHIWKWDDWAQKTIPVPMHVGHEYVGEIVEMGQEVRGFAIGDRVSGEGHITCGFCRNCRAGRRHLCRNTVGVGVNR-EGAFAEYLVIPAFNAFKIPPEISDDLAAIFDPFGNATHTALSFNLVGE-DVLITGAGPIGIMAVAIAKHVGARNVVITDVNDYRLELARKM 207
BLAST of FC875283 vs. ExPASy Swiss-Prot
Match: TDH_ALTMD (L-threonine 3-dehydrogenase OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=tdh PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.090e-29 Identity = 68/196 (34.69%), Postives = 112/196 (57.14%), Query Frame = 1 Query: 88 IQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLG-SPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKNL 672 +Q P +G D+L++++ +CG+D+H + + P+V+GHE G + +G EVK GDRV+ E I+C C C+ GR +LC ++G+G + P G A +V PA FK+PDN+S + ++ +P VH ++ E +VLI G+GPIG++ A+ GA +V+ D++ YRL +AK + Sbjct: 15 LQDTPKPEVGHNDLLIKIRKTAICGTDMHIYNWDEWSQNTIPVPVVVGHEYVGEVVGMGQEVKGFEVGDRVSGEGHITCGHCRNCRAGRVHLCRNTEGVGVNRP--GAFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVAKHVGARHVVVTDINPYRLELAKKM 207
BLAST of FC875283 vs. ExPASy Swiss-Prot
Match: TDH_SHESR (L-threonine 3-dehydrogenase OS=Shewanella sp. (strain MR-7) GN=tdh PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.648e-29 Identity = 67/189 (35.45%), Postives = 107/189 (56.61%), Query Frame = 1 Query: 106 PSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKNL 672 P +G D+L+++K +CG+D+H + + PMV+GHE G + +G EV+ GDRV+ E I+C C C+ GR +LC + G+G G A +V PA FK+PD++S + ++ +P VH ++ E +VLI G+GPIG++ R GA +VI DV++YRL +A+ + Sbjct: 21 PEMGHNDLLIKIKKTAICGTDMHIYNWDEWSQKTIPVPMVVGHEYVGEVVDIGQEVRGFKIGDRVSGEGHITCGHCRNCRAGRTHLCRNTSGVGVNR-EGSFAEYLVIPAFNAFKIPDDISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVCRHVGARHVVITDVNEYRLELARKM 207
BLAST of FC875283 vs. ExPASy Swiss-Prot
Match: TDH_SHESM (L-threonine 3-dehydrogenase OS=Shewanella sp. (strain MR-4) GN=tdh PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.648e-29 Identity = 67/189 (35.45%), Postives = 107/189 (56.61%), Query Frame = 1 Query: 106 PSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKNL 672 P +G D+L+++K +CG+D+H + + PMV+GHE G + +G EV+ GDRV+ E I+C C C+ GR +LC + G+G G A +V PA FK+PD++S + ++ +P VH ++ E +VLI G+GPIG++ R GA +VI DV++YRL +A+ + Sbjct: 21 PEMGHNDLLIKIKKTAICGTDMHIYNWDEWSQKTIPVPMVVGHEYVGEVVDIGQEVRGFKIGDRVSGEGHITCGHCRNCRAGRTHLCRNTSGVGVNR-EGSFAEYLVIPAFNAFKIPDDISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVCRHVGARHVVITDVNEYRLELARKM 207
BLAST of FC875283 vs. ExPASy Swiss-Prot
Match: TDH_SHESA (L-threonine 3-dehydrogenase OS=Shewanella sp. (strain ANA-3) GN=tdh PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.648e-29 Identity = 67/189 (35.45%), Postives = 107/189 (56.61%), Query Frame = 1 Query: 106 PSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKNL 672 P +G D+L+++K +CG+D+H + + PMV+GHE G + +G EV+ GDRV+ E I+C C C+ GR +LC + G+G G A +V PA FK+PD++S + ++ +P VH ++ E +VLI G+GPIG++ R GA +VI DV++YRL +A+ + Sbjct: 21 PEMGHNDLLIKIKKTAICGTDMHIYNWDEWSQKTIPVPMVVGHEYVGEVVDIGQEVRGFKIGDRVSGEGHITCGHCRNCRAGRTHLCRNTSGVGVNR-EGSFAEYLVIPAFNAFKIPDDISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVCRHVGARHVVITDVNEYRLELARKM 207
BLAST of FC875283 vs. ExPASy Swiss-Prot
Match: TDH_SHEPC (L-threonine 3-dehydrogenase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=tdh PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.648e-29 Identity = 67/189 (35.45%), Postives = 107/189 (56.61%), Query Frame = 1 Query: 106 PSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKNL 672 P +G D+L+++K +CG+D+H + + PMV+GHE G + +G EV+ GDRV+ E I+C C C+ GR +LC + G+G G A +V PA FK+PD++S + ++ +P VH ++ E +VLI G+GPIG++ R GA +VI DV++YRL +A+ + Sbjct: 21 PEMGHNDLLIKIKKTAICGTDMHIYNWDEWSQKTIPVPMVVGHEYVGEVVDIGQEVRGFKIGDRVSGEGHITCGHCRNCRAGRTHLCRNTSGVGVNR-EGSFAEYLVIPAFNAFKIPDDISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVCRHVGARHVVITDVNEYRLELARKM 207 The following BLAST results are available for this feature:
BLAST of FC875283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 323
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875283 ID=FC875283; Name=FC875283; organism=Citrus clementina; type=EST; length=689bpback to top |