FC875296
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875296 vs. ExPASy Swiss-Prot
Match: REC14_SCHPO (Meiotic recombination protein rec14 OS=Schizosaccharomyces pombe GN=rec14 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.197e-14 Identity = 60/225 (26.67%), Postives = 95/225 (42.22%), Query Frame = 2 Query: 38 ENAHEESVWAVTWVPATETRPALLLTGSLDETVK---LGRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNA--SIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIASGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 697 ENAH+ ++++ V L + S D +K +G + +E +T H LGV +A + S V V++ +TN + PSE W P G T+A + +WD P K ++ + KF L + +SP+GR I SG G + + + H L GH PVRS+ +SP +L +A D + +YD Sbjct: 12 ENAHQADIYSLNVVAGN------LWSASGDSKIKKWSIGDAEHSLVEEIDTPHKLGVHHLATSLDENVVVSCGFGQDVYVWNPETNEFRDLGNNAQHPSECWSSCISPDGQTIAFTSV-DGRIAVWDN-------------PSDCKISELDTKGKFGLCIDYSPNGRFIVSGHQTGQLFLISTETGRLFHVLSGHTSPVRSVAFSP-GSTLLAAAGDSKMITIYD 215
BLAST of FC875296 vs. ExPASy Swiss-Prot
Match: WDR69_XENTR (WD repeat-containing protein 69 OS=Xenopus tropicalis GN=wdr69 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.057e-13 Identity = 56/199 (28.14%), Postives = 92/199 (46.23%), Query Frame = 2 Query: 83 ATETRPALLLTGSLDETVKLGRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIASGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDT 679 A + L+ TGS+D T KL + T +GH ++S++ + +G + S D V V+++ + I TL E+ QF+ + +A A S KLWD+ +ATL+ E VL V + G+ +A+ S DGT V+ + K L LEGH + + ++ R+L ++SD T Sbjct: 184 AFNPQSTLIATGSMDTTAKLWDIQSGEEALTLSGHAAEIISLSFNTTGDRLITGSFDHTVSVWEIPSGRRIHTLIGHRGEISSAQFNWDCSLIATASMDK-SCKLWDSLNGKCVATLTGHEDE-------------VLDVTFDSTGQLVATASADGTARVYSASSRKCLAKLEGHEGEISKICFNAQGNRILTASSDKT 368
BLAST of FC875296 vs. ExPASy Swiss-Prot
Match: WDR69_RAT (WD repeat-containing protein 69 OS=Rattus norvegicus GN=Wdr69 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.381e-13 Identity = 55/220 (25.00%), Postives = 98/220 (44.55%), Query Frame = 2 Query: 107 LLTGSLDETVKLGRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATL----------------SIPRPEGLKPT----DKSSSKKF---------VLSVAWSPDGRRIASGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDT 679 + TGS D+T KL + + T GH +V ++ +P + A+ S+D+ +++D+ + + TL +E+ + FD G + + G +V +WD +T + TL S+ + T D +S K +L + G+ IA+ S DGT V++ T K + LEGH + + ++P R+L +SD T Sbjct: 150 IATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRI-ITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKT 368
BLAST of FC875296 vs. ExPASy Swiss-Prot
Match: TUP11_SCHPO (Transcriptional repressor tup11 OS=Schizosaccharomyces pombe GN=tup11 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.381e-13 Identity = 62/230 (26.96%), Postives = 107/230 (46.52%), Query Frame = 2 Query: 26 LKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLGRPDDMQLERTNTGHCL-------GVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIASGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMY 694 ++ V + HE+ ++++ + +++GS D T +L + TG C+ GV ++A P+ A SLD +RV+ V + + LE V+ + F P + L ++G ++K+W+ + LS +PEG+ + FVLSVA SPD R SGS D ++ +D+ + +GH V S+ +SP D R S S D ++ Sbjct: 394 VRYVFSGHEQDIYSLDF----SHNGRFIVSGSGDRTARLWDVE--------TGQCILKLEIENGVTAIAISPNDQFIAVGSLDQIIRVWSV-SGTLVERLEGHKESVYSIAFSPDSSIL-LSGSLDKTIKVWELQATRSVG-LSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSP-DGRQFASGSGDLRARIW 607
BLAST of FC875296 vs. ExPASy Swiss-Prot
Match: KTNB1_DANRE (Katanin p80 WD40-containing subunit B1 OS=Danio rerio GN=katnb1 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.381e-13 Identity = 56/191 (29.32%), Postives = 94/191 (49.21%), Query Frame = 2 Query: 107 LLTGSLDETVKLGRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIASGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDT 679 ++ GSL +++L + ++ RT GH + S+ HP G AS S+DS ++++DV + + V + F P G LA A S +VKLWD +I T+ +S V V + P+ +ASGS D T+ ++D+ + + EG VRS++++P D L+S S++T Sbjct: 78 VVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDS-TVKLWDLIAGKMI-------------TEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNP-DGSCLYSGSENT 253 HSP 2 Score: 68.1662 bits (165), Expect = 4.910e-11 Identity = 52/164 (31.71%), Postives = 78/164 (47.56%), Query Frame = 2 Query: 206 VAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIASGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 697 V SG + A+ D V ++ V I +L S V +QF+ + VAG S S++LWD ++ TL K + S+ + P G +ASGS+D I ++DV R + +GH VR L +SP D + L SASDD+ V ++D Sbjct: 27 VLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERV-VAGSLSGSLRLWDLEAAKILRTLM-------------GHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSP-DGKWLASASDDSTVKLWD 175
BLAST of FC875296 vs. ExPASy Swiss-Prot
Match: WDR5_DICDI (WD repeat-containing protein 5 homolog OS=Dictyostelium discoideum GN=wdr5 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.355e-13 Identity = 59/219 (26.94%), Postives = 102/219 (46.58%), Query Frame = 2 Query: 26 LKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLGRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIASGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLV-YSPVDPRVLFSASDDT 679 LK H +S+ +V + P + L + S D+T+K+ D + ERT GH G+ +A + SAS D ++++DV++ + TL+ V+ + F+P+ + L V+G +V++WD T + S+ V V ++ DG + SGS DGT+ ++D T + L+ + S V +SP VL D+T Sbjct: 38 LKYTLKGHLKSISSVKFSPDGKW----LASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQ-SNLIVSGSFDENVRIWDVNTGECTKMI-------------SAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNT 238
BLAST of FC875296 vs. ExPASy Swiss-Prot
Match: YZLL_CAEEL (Uncharacterized WD repeat-containing protein K04G11.4 OS=Caenorhabditis elegans GN=K04G11.4 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.017e-13 Identity = 61/216 (28.24%), Postives = 104/216 (48.15%), Query Frame = 2 Query: 35 VENAHEESVWAVTWVPATETRPALLLTGSLDETVKLGRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIASGSMDGTISVFDVTRAKFLHHL-EGHFMPVRSLVYSPVDPRVLFSASDDT 679 + NAH++S+ + + P + +GS D ++K+ R D + E+T GH LG+ + + S S D V+VFDV + + TL+ + V+ F+P GT +A +G ++++W N I SIP E V SV ++ DG +ASGS DG + ++D T + L + P+ + +SP +L S ++T Sbjct: 102 IPNAHKKSISGIKFSPDGR----YMGSGSADCSIKIWRMDFVY-EKTLMGHRLGINEFSWSSDSKLIVSCSDDKLVKVFDVSSGRCVKTLKGHTNYVFCCCFNPSGTLIA-SGSFDETIRIWCARNGNTI--FSIPGHEDP-----------VSSVCFNRDGAYLASGSYDGIVRIWDSTTGTCVKTLIDEEHPPITHVKFSPNGKYILASNLNNT 298
BLAST of FC875296 vs. ExPASy Swiss-Prot
Match: WDS_DROME (Protein will die slowly OS=Drosophila melanogaster GN=wds PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.017e-13 Identity = 63/219 (28.77%), Postives = 103/219 (47.03%), Query Frame = 2 Query: 26 LKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLGRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIASGSMDGTISVFDVTRAKFLHHL-EGHFMPVRSLVYSPVDPRVLFSASDDT 679 LK H ++V AV + P E L + S D+ +K+ D + E+T +GH LG+ VA + S S D ++V+++ T S+ TL+ + V+ F+P+ + L V+G SV++WD T + TL P P V +V ++ DG I S S DG ++D + L L + PV + +SP +L + D+T Sbjct: 64 LKFTLAGHTKAVSAVKFSPNGEW----LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVRTGKCLKTL----PAHSDP---------VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT 264
BLAST of FC875296 vs. ExPASy Swiss-Prot
Match: WDR69_XENLA (WD repeat-containing protein 69 OS=Xenopus laevis GN=wdr69 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.246e-13 Identity = 54/192 (28.12%), Postives = 90/192 (46.88%), Query Frame = 2 Query: 104 LLLTGSLDETVKLGRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIASGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDT 679 L+ TGS+D T KL + T +GH ++S++ + +G + S D V V+++ + I TL E+ QF+ + +A A S KLWD+ +ATL+ E VL V + G+ +A+ S DGT V+ + K L LEGH + + ++ R++ ++SD T Sbjct: 191 LIATGSMDTTAKLWDIQSGEEALTLSGHAAEIISLSFNTTGDRLITGSFDHTVSVWEIPSGRRIHTLIGHRGEISSAQFNWDCSLIATASMDK-SCKLWDSLNGKCVATLTGHDDE-------------VLDVTFDSTGQLVATASADGTARVYSASSRKCLAKLEGHEGEISKICFNAQGNRIVTASSDKT 368
BLAST of FC875296 vs. ExPASy Swiss-Prot
Match: TUP1_CANAL (Transcriptional repressor TUP1 OS=Candida albicans GN=TUP1 PE=4 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.246e-13 Identity = 53/178 (29.78%), Postives = 83/178 (46.63%), Query Frame = 2 Query: 167 ERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIASGSMDGTISVFDVTRAKFLHHLE-------GHFMPVRSLVYSPVDPRVLFSASDDT 679 + T L + SV P G + A+ + D +R++D+ T I L +++ + F P G L V+G G SV++WD T TLSI + V +VA SPDG+ IA+GS+D T+ V+D T + L+ GH V S+ +S ++ + D T Sbjct: 250 DNTTASGDLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRL-VSGSGDRSVRIWDLRTSQCSLTLSI--------------EDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRT 412 The following BLAST results are available for this feature:
BLAST of FC875296 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875296 ID=FC875296; Name=FC875296; organism=Citrus clementina; type=EST; length=699bpback to top |