FC875296
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875296 vs. ExPASy Swiss-Prot
Match: WDR5_XENTR (WD repeat-containing protein 5 OS=Xenopus tropicalis GN=wdr5 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.852e-13 Identity = 62/219 (28.31%), Postives = 103/219 (47.03%), Query Frame = 2 Query: 26 LKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLGRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIASGSMDGTISVFDVTRAKFLHHL-EGHFMPVRSLVYSPVDPRVLFSASDDT 679 LK H ++V +V + P E L + S D+ +K+ D + E+T +GH LG+ VA + SAS D ++++DV + + TL+ + V+ F+P+ + L V+G SV++WD T + TL P P V +V ++ DG I S S DG ++D + L L + PV + +SP +L + D+T Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEW----LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVKTGKCLKTL----PAHSDP---------VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT 237
BLAST of FC875296 vs. ExPASy Swiss-Prot
Match: WDR5_RAT (WD repeat-containing protein 5 OS=Rattus norvegicus GN=Wdr5 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.852e-13 Identity = 62/219 (28.31%), Postives = 103/219 (47.03%), Query Frame = 2 Query: 26 LKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLGRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIASGSMDGTISVFDVTRAKFLHHL-EGHFMPVRSLVYSPVDPRVLFSASDDT 679 LK H ++V +V + P E L + S D+ +K+ D + E+T +GH LG+ VA + SAS D ++++DV + + TL+ + V+ F+P+ + L V+G SV++WD T + TL P P V +V ++ DG I S S DG ++D + L L + PV + +SP +L + D+T Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEW----LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVKTGKCLKTL----PAHSDP---------VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT 237
BLAST of FC875296 vs. ExPASy Swiss-Prot
Match: WDR5_MOUSE (WD repeat-containing protein 5 OS=Mus musculus GN=Wdr5 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.852e-13 Identity = 62/219 (28.31%), Postives = 103/219 (47.03%), Query Frame = 2 Query: 26 LKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLGRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIASGSMDGTISVFDVTRAKFLHHL-EGHFMPVRSLVYSPVDPRVLFSASDDT 679 LK H ++V +V + P E L + S D+ +K+ D + E+T +GH LG+ VA + SAS D ++++DV + + TL+ + V+ F+P+ + L V+G SV++WD T + TL P P V +V ++ DG I S S DG ++D + L L + PV + +SP +L + D+T Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEW----LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVKTGKCLKTL----PAHSDP---------VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT 237
BLAST of FC875296 vs. ExPASy Swiss-Prot
Match: WDR5_HUMAN (WD repeat-containing protein 5 OS=Homo sapiens GN=WDR5 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.852e-13 Identity = 62/219 (28.31%), Postives = 103/219 (47.03%), Query Frame = 2 Query: 26 LKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLGRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIASGSMDGTISVFDVTRAKFLHHL-EGHFMPVRSLVYSPVDPRVLFSASDDT 679 LK H ++V +V + P E L + S D+ +K+ D + E+T +GH LG+ VA + SAS D ++++DV + + TL+ + V+ F+P+ + L V+G SV++WD T + TL P P V +V ++ DG I S S DG ++D + L L + PV + +SP +L + D+T Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEW----LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVKTGKCLKTL----PAHSDP---------VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT 237
BLAST of FC875296 vs. ExPASy Swiss-Prot
Match: WDR5_BOVIN (WD repeat-containing protein 5 OS=Bos taurus GN=WDR5 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.852e-13 Identity = 62/219 (28.31%), Postives = 103/219 (47.03%), Query Frame = 2 Query: 26 LKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLGRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIASGSMDGTISVFDVTRAKFLHHL-EGHFMPVRSLVYSPVDPRVLFSASDDT 679 LK H ++V +V + P E L + S D+ +K+ D + E+T +GH LG+ VA + SAS D ++++DV + + TL+ + V+ F+P+ + L V+G SV++WD T + TL P P V +V ++ DG I S S DG ++D + L L + PV + +SP +L + D+T Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEW----LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVKTGKCLKTL----PAHSDP---------VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT 237
BLAST of FC875296 vs. ExPASy Swiss-Prot
Match: PF20_CHLRE (Flagellar WD repeat-containing protein Pf20 OS=Chlamydomonas reinhardtii GN=PF20 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.949e-13 Identity = 51/174 (29.31%), Postives = 81/174 (46.55%), Query Frame = 2 Query: 158 MQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIASGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDT 679 + L +T GH L V ++A HP+ I +AS D +++ + I E V + F P GT LA +GGG ++VK+WD + T + K+ + SV + G +ASGS+D T+ ++D+ K L GH V L + P + ++SD T Sbjct: 316 LSLNKTFKGHLLSVANLALHPTKPILVTASDDKTWKMWHMPGGDLIMCGEGHKDWVAGVDFHPAGTCLA-SGGGDSAVKIWDFEKQRCVTTF-------------TDHKQAIWSVRFHHLGEVVASGSLDHTVRLWDLPAGKCRMALRGHVDSVNDLAWQPFSSSLATASSDKT 475
BLAST of FC875296 vs. ExPASy Swiss-Prot
Match: KTNB1_XENLA (Katanin p80 WD40-containing subunit B1 OS=Xenopus laevis GN=katnb1 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.169e-12 Identity = 53/198 (26.77%), Postives = 93/198 (46.97%), Query Frame = 2 Query: 104 LLLTGSLDETVKLGRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIASGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 697 L++ GS ++++ + ++ RT GH V S+ HP G AS SLD+ ++++DV + + V ++F P G LA A SVKLWD ++A L S K V + + P+ +ASGS D T+ +D+ + + + EG +PVR++++S + D V+ ++ Sbjct: 77 LIVAGSQSGSLRIWDLEAAKILRTLMGHKANVSSLDFHPYGEFVASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASA-SDDHSVKLWDLTAGKMMAEL-------------SEHKGPVNIIEFHPNEYLLASGSADRTVRFWDLEKFQLVGCTEGETIPVRAILFSNDGGCIFCGGKDSLRVYGWE 260
BLAST of FC875296 vs. ExPASy Swiss-Prot
Match: KTNB1_XENTR (Katanin p80 WD40-containing subunit B1 OS=Xenopus tropicalis GN=katnb1 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.526e-12 Identity = 51/178 (28.65%), Postives = 87/178 (48.88%), Query Frame = 2 Query: 104 LLLTGSLDETVKLGRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIASGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYS 637 L++ GS ++++ + ++ RT GH V S+ HP G AS SLD+ ++++DV + + V ++F P G LA A SVKLWD ++A L S K V + + P+ +ASGS D T+ +D+ + + + EG +PVR++++S Sbjct: 77 LIVAGSQSGSLRVWDLEAAKILRTLMGHKANVCSLDFHPYGDFVASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASA-SDDHSVKLWDLTAGKMMAEL-------------SEHKGPVNIIEFHPNEYLLASGSADRTVRFWDLEKFQLIGCTEGETIPVRAILFS 240
BLAST of FC875296 vs. ExPASy Swiss-Prot
Match: GBLP_LEIIN (Guanine nucleotide-binding protein subunit beta-like protein OS=Leishmania infantum PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.526e-12 Identity = 53/183 (28.96%), Postives = 92/183 (50.27%), Query Frame = 2 Query: 35 VENAHEESVWAVTWVPATETRPALLLTGSLDETVKLGRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIASGSMDGTISVFDVTRAK 583 + + HE+ V ++ + P+ E ++++GS D T+K+ + + ERT GH V +V P G + AS D ++D+ T + + S + Q+ F P + VA S SV +D + +IA L+ P+G KP++ +S+AWS DG + SG D I V+ ++ A+ Sbjct: 145 LRDGHEDWVSSICFSPSLEH--PIVVSGSWDNTIKVWNVNGGKCERTLKGHSNYVSTVTVSPDGSLCASGGKDGAALLWDLSTGEQLFKINV-ESPINQIAFSPNRFWMCVATERSLSV--YDLESKAVIAELT---PDGAKPSE-------CISIAWSADGNTLYSGHKDNLIRVWSISDAE 312
BLAST of FC875296 vs. ExPASy Swiss-Prot
Match: GBLP_LEICH (Guanine nucleotide-binding protein subunit beta-like protein OS=Leishmania chagasi PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.526e-12 Identity = 53/183 (28.96%), Postives = 92/183 (50.27%), Query Frame = 2 Query: 35 VENAHEESVWAVTWVPATETRPALLLTGSLDETVKLGRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIASGSMDGTISVFDVTRAK 583 + + HE+ V ++ + P+ E ++++GS D T+K+ + + ERT GH V +V P G + AS D ++D+ T + + S + Q+ F P + VA S SV +D + +IA L+ P+G KP++ +S+AWS DG + SG D I V+ ++ A+ Sbjct: 145 LRDGHEDWVSSICFSPSLEH--PIVVSGSWDNTIKVWNVNGGKCERTLKGHSNYVSTVTVSPDGSLCASGGKDGAALLWDLSTGEQLFKINV-ESPINQIAFSPNRFWMCVATERSLSV--YDLESKAVIAELT---PDGAKPSE-------CISIAWSADGNTLYSGHKDNLIRVWSISDAE 312 The following BLAST results are available for this feature:
BLAST of FC875296 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875296 ID=FC875296; Name=FC875296; organism=Citrus clementina; type=EST; length=699bpback to top |