FC875307

Overview
NameFC875307
Unique NameFC875307
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP4C_RAT (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Rattus norvegicus GN=Ppp4c PE=1 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 6.310e-67
Identity = 114/165 (69.09%), Postives = 142/165 (86.06%), Query Frame = 3 
Query:  198 QISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            QI QL +C+ + E +VKALC KA+EIL+EESNVQ V SPVT+CGDIHGQF+DL ELF++GG  P+TNYLFMGD+VDRG+YSVET  LL+ALKVRYP RIT++RGNHESRQITQVYGFYDECLRKYG+  +W+  T++FDY  L+A+++ +IFC+HGGLSP I+ L
Sbjct:   10 QIEQLRRCELIKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVTVWRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQTL 174
[Close]
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP4C_PONAB (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Pongo abelii GN=PPP4C PE=2 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 6.310e-67
Identity = 114/165 (69.09%), Postives = 142/165 (86.06%), Query Frame = 3 
Query:  198 QISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            QI QL +C+ + E +VKALC KA+EIL+EESNVQ V SPVT+CGDIHGQF+DL ELF++GG  P+TNYLFMGD+VDRG+YSVET  LL+ALKVRYP RIT++RGNHESRQITQVYGFYDECLRKYG+  +W+  T++FDY  L+A+++ +IFC+HGGLSP I+ L
Sbjct:   10 QIEQLRRCELIKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVTVWRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQTL 174
[Close]
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP4C_MOUSE (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Mus musculus GN=Ppp4c PE=1 SV=2)

HSP 1 Score: 253.832 bits (647), Expect = 6.310e-67
Identity = 114/165 (69.09%), Postives = 142/165 (86.06%), Query Frame = 3 
Query:  198 QISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            QI QL +C+ + E +VKALC KA+EIL+EESNVQ V SPVT+CGDIHGQF+DL ELF++GG  P+TNYLFMGD+VDRG+YSVET  LL+ALKVRYP RIT++RGNHESRQITQVYGFYDECLRKYG+  +W+  T++FDY  L+A+++ +IFC+HGGLSP I+ L
Sbjct:   10 QIEQLRRCELIKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVTVWRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQTL 174
[Close]
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP4C_HUMAN (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Homo sapiens GN=PPP4C PE=1 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 6.310e-67
Identity = 114/165 (69.09%), Postives = 142/165 (86.06%), Query Frame = 3 
Query:  198 QISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            QI QL +C+ + E +VKALC KA+EIL+EESNVQ V SPVT+CGDIHGQF+DL ELF++GG  P+TNYLFMGD+VDRG+YSVET  LL+ALKVRYP RIT++RGNHESRQITQVYGFYDECLRKYG+  +W+  T++FDY  L+A+++ +IFC+HGGLSP I+ L
Sbjct:   10 QIEQLRRCELIKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVTVWRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQTL 174
[Close]
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP4C_BOVIN (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Bos taurus GN=PPP4C PE=2 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 6.310e-67
Identity = 114/165 (69.09%), Postives = 142/165 (86.06%), Query Frame = 3 
Query:  198 QISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            QI QL +C+ + E +VKALC KA+EIL+EESNVQ V SPVT+CGDIHGQF+DL ELF++GG  P+TNYLFMGD+VDRG+YSVET  LL+ALKVRYP RIT++RGNHESRQITQVYGFYDECLRKYG+  +W+  T++FDY  L+A+++ +IFC+HGGLSP I+ L
Sbjct:   10 QIEQLRRCELIKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVTVWRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQTL 174
[Close]
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP4CB_DANRE (Serine/threonine-protein phosphatase 4 catalytic subunit B OS=Danio rerio GN=ppp4cb PE=2 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 8.241e-67
Identity = 114/165 (69.09%), Postives = 142/165 (86.06%), Query Frame = 3 
Query:  198 QISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            QI QL +C+ + E +VKALC KA+EIL+EESNVQ V SPVT+CGDIHGQF+DL ELF++GG  P+TNYLFMGD+VDRG+YSVET  LL+ALKVRYP RIT++RGNHESRQITQVYGFYDECLRKYG+  +W+  T++FDY  L+A+++ +IFC+HGGLSP I+ L
Sbjct:   10 QIDQLRRCELIKENEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVTVWRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQTL 174
[Close]
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP4CA_DANRE (Serine/threonine-protein phosphatase 4 catalytic subunit A OS=Danio rerio GN=ppp4ca PE=2 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 1.836e-66
Identity = 114/165 (69.09%), Postives = 143/165 (86.67%), Query Frame = 3 
Query:  198 QISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            QI QL +C+ + E +VKALC KA+EIL+EESNVQ V SPVT+CGDIHGQF+DL ELF++GG+ P+TNYLFMGD+VDRG+YSVET  LL+ALKVRYP RIT++RGNHESRQITQVYGF+DEC RKYG+A +W+  T++FDY  L+A+V+ +IFC+HGGLSP I+ L
Sbjct:   14 QIEQLRRCELIKENEVKALCAKAREILVEESNVQSVDSPVTVCGDIHGQFYDLKELFRVGGEVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFFDECHRKYGSATVWRYCTEIFDYLSLSAIVDGKIFCVHGGLSPSIQTL 178
[Close]
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP4C_DROME (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Drosophila melanogaster GN=Pp4-19C PE=2 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 2.398e-66
Identity = 113/165 (68.48%), Postives = 141/165 (85.45%), Query Frame = 3 
Query:  198 QISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            QI QL +C+ + E +VKALC KA+EIL+EE NVQ V SPVT+CGDIHGQF+DL ELF++GG  P+ NYLFMGD+VDRGYYSVET  LL+ALKVRYP RIT++RGNHESRQITQVYGFYDECLRKYG+  +W+  T++FDY  L+A+++ +IFC+HGGLSP I++L
Sbjct:   10 QIEQLKRCEIIKENEVKALCAKAREILVEEGNVQRVDSPVTVCGDIHGQFYDLKELFKVGGDVPEKNYLFMGDFVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSTAVWRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQYL 174
[Close]
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PPP6_DICDI (Serine/threonine-protein phosphatase 6 catalytic subunit OS=Dictyostelium discoideum GN=ppp6c PE=2 SV=2)

HSP 1 Score: 244.202 bits (622), Expect = 5.000e-64
Identity = 109/166 (65.66%), Postives = 134/166 (80.72%), Query Frame = 3 
Query:  195 EQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            E +    QCK L E  +K LCE+ KE+L+EESNVQPV+SPVTICGDIHGQF+DL ELF+ GG+ PDTNY+FMGD+VDRGYYS+ET T L+ALK RYP +IT+LRGNHESRQITQVYGFYDEC +KYGN N WK  T +FD+  L A+++ ++ C+HGGLSP +  L
Sbjct:    9 EWVETARQCKYLPENDLKKLCERVKELLLEESNVQPVRSPVTICGDIHGQFYDLLELFKTGGEVPDTNYVFMGDFVDRGYYSLETFTYLLALKARYPDKITLLRGNHESRQITQVYGFYDECQQKYGNVNAWKYCTSVFDFLTLAAIIDGKVLCVHGGLSPKVRTL 174
[Close]
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP4C1_CAEEL (Serine/threonine-protein phosphatase 4 catalytic subunit 1 OS=Caenorhabditis elegans GN=pph-4.1 PE=1 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.114e-63
Identity = 108/161 (67.08%), Postives = 136/161 (84.47%), Query Frame = 3 
Query:  201 ISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFI 683
            I +LM+C+ ++E  VK LC KA+EIL EE NVQ + SPVTICGDIHGQF+DL ELF++GG  P+TNYLF+GD+VDRG+YSVET  LL+ALK RYP R+ ++RGNHESRQITQVYGFYDECLRKYGNA++WK  T++FDY  L A+++ ++FC+HGGLSP I
Sbjct:   36 IEKLMRCELIAEQDVKTLCAKAREILAEEGNVQVIDSPVTICGDIHGQFYDLMELFKVGGPVPNTNYLFLGDFVDRGFYSVETFLLLLALKARYPDRMMLIRGNHESRQITQVYGFYDECLRKYGNASVWKHCTEVFDYLSLAAVIDGKVFCVHGGLSPSI 196
The following BLAST results are available for this feature:
BLAST of FC875307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 197
Match NameE-valueIdentityDescription
PP4C_RAT6.310e-6769.09Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_PONAB6.310e-6769.09Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_MOUSE6.310e-6769.09Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_HUMAN6.310e-6769.09Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_BOVIN6.310e-6769.09Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4CB_DANRE8.241e-6769.09Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4CA_DANRE1.836e-6669.09Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_DROME2.398e-6668.48Serine/threonine-protein phosphatase 4 catalytic s... [more]
PPP6_DICDI5.000e-6465.66Serine/threonine-protein phosphatase 6 catalytic s... [more]
PP4C1_CAEEL1.114e-6367.08Serine/threonine-protein phosphatase 4 catalytic s... [more]

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Properties
Property NameValue
Genbank descriptionC31402E05EF CTVClemen1 Citrus clementina cDNA clone C31402E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875307 ID=FC875307; Name=FC875307; organism=Citrus clementina; type=EST; length=698bp
GACGCGCGCTCTCATTTCGACTTCGTCGGCTCCGCTACACAAGACTGAAG
AATCACACAAACGAAACTCTCTGATCTCACTCTAGGGTTAGGGATATCCC
TAATCCGGACACCGTTATCCCGATTCGGTTTAGGATTCGAGAATCAAAGA
TGGGCGCAAATTCGTTATCCACTGACACGACCACCGACCTCGACGAGCAG
ATCTCGCAGCTCATGCAGTGCAAGCCTCTCTCCGAACCACAGGTTAAAGC
ATTATGCGAGAAGGCTAAGGAGATATTGATGGAAGAAAGCAATGTACAGC
CTGTGAAAAGTCCAGTGACAATTTGTGGCGATATTCATGGGCAGTTTCAT
GATCTTGCAGAACTTTTTCAAATTGGCGGGAAGTGTCCAGATACCAATTA
CTTGTTTATGGGAGATTATGTGGACCGTGGGTATTATTCTGTTGAAACAG
TTACGCTCTTAGTGGCCTTGAAGGTGCGGTATCCTCAGCGGATCACTATT
CTTAGAGGAAACCATGAGAGTCGTCAGATTACTCAAGTTTATGGATTCTA
TGATGAATGTCTACGGAAGTATGGCAATGCTAACATTTGGAAGATTTTTA
CTGACCTTTTTGACTACTTTCCGTTGACTGCCTTGGTAGAGTCAGAAATA
TTCTGTCTGCATGGTGGGCTGTCCCCCTTCATTGAACACTTGATATAT
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