FC875307

Overview
NameFC875307
Unique NameFC875307
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP4C1_CAEBR (Serine/threonine-protein phosphatase 4 catalytic subunit 1 OS=Caenorhabditis briggsae GN=pph-4.1 PE=3 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 1.900e-63
Identity = 107/161 (66.46%), Postives = 136/161 (84.47%), Query Frame = 3
Query:  201 ISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFI 683
            I +LM+C+ ++E  VK LC KA+EIL EE NVQ + SPVTICGDIHGQF+DL ELF++GG  P+TNYLF+GD+VDRG+YSVET  LL+ALK RYP R+ ++RGNHESRQITQVYGFYDEC+RKYGNA++WK  T++FDY  L A+++ ++FC+HGGLSP I
Sbjct:   36 IEKLMRCELIAEQDVKTLCAKAREILAEEGNVQVIDSPVTICGDIHGQFYDLMELFRVGGPVPNTNYLFLGDFVDRGFYSVETFLLLLALKARYPDRMMLIRGNHESRQITQVYGFYDECMRKYGNASVWKHCTEVFDYLALAAVIDGKVFCVHGGLSPSI 196          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: YD44_SCHPO (Putative serine/threonine-protein phosphatase C22H10.04 OS=Schizosaccharomyces pombe GN=SPAC22H10.04 PE=2 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.231e-62
Identity = 105/164 (64.02%), Postives = 135/164 (82.32%), Query Frame = 3
Query:  201 ISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            I +L + + ++E  +  LC  AKE+LM+ESNV  + +P+T+ GDIHGQF DL E+F+IGG CP TNYLF+GDYVDRGYYS+ET+TLL+ LK+RYP+RIT+LRGNHESR ITQ YGFY ECLRKYGNAN+WK FTD+FD+  L+A ++  IFC+HGGLSP I+H+
Sbjct:    8 IERLYEKQLIAESVIAYLCSLAKEVLMQESNVVRLSTPITVVGDIHGQFDDLLEIFRIGGPCPYTNYLFLGDYVDRGYYSIETITLLICLKLRYPKRITLLRGNHESRGITQTYGFYSECLRKYGNANVWKYFTDIFDFLTLSATIDDTIFCVHGGLSPSIQHI 171          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PPE1_SCHPO (Serine/threonine-protein phosphatase ppe1 OS=Schizosaccharomyces pombe GN=ppe1 PE=1 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.608e-62
Identity = 106/166 (63.86%), Postives = 135/166 (81.33%), Query Frame = 3
Query:  195 EQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            E I+ + +CK L E Q+K LCE  K ILMEESN+QPV++PVT+CGDIHGQF+DL ELF++GG+ P TNY+FMGD+VDRGY+S+ET TL + LK RYP +IT+LRGNHESRQITQVYGFYDEC  KYGNAN+WK    +FD+  L A+++++I C+HGGLSP +  L
Sbjct:    6 EWIATVRKCKYLPEHQLKRLCEMVKVILMEESNIQPVRTPVTVCGDIHGQFYDLLELFRVGGELPSTNYIFMGDFVDRGYFSLETFTLFMLLKARYPDKITLLRGNHESRQITQVYGFYDECQTKYGNANVWKYCCQVFDFLTLAAVIDNKILCVHGGLSPEVRTL 171          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP4C2_CAEEL (Serine/threonine-protein phosphatase 4 catalytic subunit 2 OS=Caenorhabditis elegans GN=pph-4.2 PE=2 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 2.101e-62
Identity = 107/165 (64.85%), Postives = 135/165 (81.82%), Query Frame = 3
Query:  198 QISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            QI   M+C+ + E QVK++C K +EIL+EE+NVQ + +PVTICGDIHGQFHDL ELF++GG  P+TNYLF+GDYVDRGY SVET  LL+ LK RYP RIT++RGNHESRQITQVYGFYDEC+RKYG+  +WK  T++FDY  L A+++ ++FC+HGGLSP I  L
Sbjct:   20 QIEIAMRCELICETQVKSICAKVREILIEEANVQVIDTPVTICGDIHGQFHDLMELFRVGGSPPNTNYLFLGDYVDRGYNSVETFILLMLLKCRYPDRITLIRGNHESRQITQVYGFYDECVRKYGSGQVWKHCTEIFDYLSLAAVIDGKLFCVHGGLSPSIATL 184          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP2AB_DICDI (Probable serine/threonine-protein phosphatase 2A catalytic subunit B OS=Dictyostelium discoideum GN=DDB_G0283187 PE=3 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 2.101e-62
Identity = 101/159 (63.52%), Postives = 134/159 (84.28%), Query Frame = 3
Query:  201 ISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSP 677
            I +L +C+ L E  +K + +K KE+L+ ESNVQ ++SPVT+ GD+HGQF+D+ E+F+IGG+CPDTNYLF+GDYVDRGY+SVET++LL  LK+RYP RIT+LRGNHESRQITQVYGFY EC+RKYGN  +WK FT++FDY  + A+++  I+C+HGGLSP
Sbjct:   12 IEKLQKCEILPESTIKEITDKMKELLISESNVQEIRSPVTVVGDVHGQFYDVLEIFKIGGQCPDTNYLFLGDYVDRGYHSVETISLLTCLKLRYPSRITLLRGNHESRQITQVYGFYGECMRKYGNPTVWKYFTEMFDYLSVAAIIDEAIYCVHGGLSP 170          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP2A1_PARTE (Serine/threonine-protein phosphatase PP2A catalytic subunit 1 OS=Paramecium tetraurelia GN=Ppn1 PE=3 SV=2)

HSP 1 Score: 236.498 bits (602), Expect = 1.043e-61
Identity = 108/163 (66.26%), Postives = 135/163 (82.82%), Query Frame = 3
Query:  198 QISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIE 686
            QI++L Q + LSE +VK+LC KAKEIL +E N+  V++P+TICGDIHGQFHDL ELFQIGG  PDTNYLF+GDYVDRG  SVET +L+++LKVRY  RI +LRGNHE+R+I ++YGFYDEC RKYGN  +WK FT++F Y PL+A+VE +IFC HGGLSP +E
Sbjct:   18 QIAKLKQGQILSEQEVKSLCIKAKEILQDEPNIIQVRAPLTICGDIHGQFHDLIELFQIGGNLPDTNYLFLGDYVDRGSQSVETFSLMLSLKVRYKDRIVLLRGNHENREINKIYGFYDECFRKYGNEIVWKQFTEVFGYLPLSAIVEQQIFCAHGGLSPAME 180          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: FYPP3_ARATH (Phytochrome-associated serine/threonine protein phosphatase 3 OS=Arabidopsis thaliana GN=FYPP3 PE=1 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 1.043e-61
Identity = 106/159 (66.67%), Postives = 130/159 (81.76%), Query Frame = 3
Query:  201 ISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSP 677
            IS++   + LSE +++ LCE  KEIL+EESNVQPV SPVT+CGDIHGQFHDL +LFQ GG  PDTNY+FMGD+VDRGY S+E  T+L+ LK RYP  IT+LRGNHESRQ+TQVYGFYDEC RKYGNAN W+  TD+FDY  L+A+++  + C+HGGLSP
Sbjct:    7 ISKVKDGQHLSEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPDTNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSP 165          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP2A2_PARTE (Serine/threonine-protein phosphatase PP2A catalytic subunit 2 OS=Paramecium tetraurelia GN=Ppn2 PE=3 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 2.322e-61
Identity = 107/163 (65.64%), Postives = 135/163 (82.82%), Query Frame = 3
Query:  198 QISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIE 686
            QI++L Q + L+E +VK+LC KAKEIL +E N+  V++P+TICGDIHGQFHDL ELFQIGG  PDTNYLF+GDYVDRG  SVET +L+++LKVRY  RI +LRGNHE+R+I ++YGFYDEC RKYGN  +WK FT++F Y PL+A+VE +IFC HGGLSP +E
Sbjct:   18 QIAKLRQGQILTEQEVKSLCIKAKEILQDEPNIIQVRAPLTICGDIHGQFHDLIELFQIGGNLPDTNYLFLGDYVDRGSQSVETFSLMLSLKVRYKDRIVLLRGNHENREINKIYGFYDECFRKYGNEIVWKQFTEVFGYLPLSAIVEQQIFCAHGGLSPAME 180          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP2A3_PARTE (Serine/threonine-protein phosphatase PP2A catalytic subunit 3 OS=Paramecium tetraurelia GN=Ppn3 PE=3 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 3.033e-61
Identity = 107/163 (65.64%), Postives = 135/163 (82.82%), Query Frame = 3
Query:  198 QISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIE 686
            QI++L Q + L+E ++K+LC KAKEIL +E N+  V++P+TICGDIHGQFHDL ELFQIGG  PDTNYLF+GDYVDRG  SVET +L+++LKVRY  RI +LRGNHE+R+I +VYGFYDEC RKYGN  +WK FT++F Y PL+A+VE +IFC HGGLSP +E
Sbjct:   18 QIAKLKQGQILTESEIKSLCIKAKEILSDEPNIIQVRAPLTICGDIHGQFHDLIELFQIGGNLPDTNYLFLGDYVDRGSQSVETFSLMLSLKVRYKDRIVLLRGNHENREINKVYGFYDECFRKYGNEIVWKQFTEVFGYLPLSAIVEQQIFCAHGGLSPAME 180          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: FYPP_PEA (Phytochrome-associated serine/threonine protein phosphatase OS=Pisum sativum GN=FYPP PE=1 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.153e-60
Identity = 105/161 (65.22%), Postives = 130/161 (80.75%), Query Frame = 3
Query:  201 ISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFI 683
            IS++   + L E +++ LCE  KEIL+EESNVQPV SPVT+CGDIHGQFHDL +LFQ GG  P+TNY+FMGD+VDRGY S+E  T+L+ LK RYP  IT+LRGNHESRQ+TQVYGFYDEC RKYGNAN W+  TD+FDY  L+A+++  + C+HGGLSP I
Sbjct:    7 ISKVKDGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDI 167          
The following BLAST results are available for this feature:
BLAST of FC875307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 197
Match NameE-valueIdentityDescription
PP4C1_CAEBR1.900e-6366.46Serine/threonine-protein phosphatase 4 catalytic s... [more]
YD44_SCHPO1.231e-6264.02Putative serine/threonine-protein phosphatase C22H... [more]
PPE1_SCHPO1.608e-6263.86Serine/threonine-protein phosphatase ppe1 OS=Schiz... [more]
PP4C2_CAEEL2.101e-6264.85Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP2AB_DICDI2.101e-6263.52Probable serine/threonine-protein phosphatase 2A c... [more]
PP2A1_PARTE1.043e-6166.26Serine/threonine-protein phosphatase PP2A catalyti... [more]
FYPP3_ARATH1.043e-6166.67Phytochrome-associated serine/threonine protein ph... [more]
PP2A2_PARTE2.322e-6165.64Serine/threonine-protein phosphatase PP2A catalyti... [more]
PP2A3_PARTE3.033e-6165.64Serine/threonine-protein phosphatase PP2A catalyti... [more]
FYPP_PEA1.153e-6065.22Phytochrome-associated serine/threonine protein ph... [more]

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Properties
Property NameValue
Genbank descriptionC31402E05EF CTVClemen1 Citrus clementina cDNA clone C31402E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875307 ID=FC875307; Name=FC875307; organism=Citrus clementina; type=EST; length=698bp
GACGCGCGCTCTCATTTCGACTTCGTCGGCTCCGCTACACAAGACTGAAG
AATCACACAAACGAAACTCTCTGATCTCACTCTAGGGTTAGGGATATCCC
TAATCCGGACACCGTTATCCCGATTCGGTTTAGGATTCGAGAATCAAAGA
TGGGCGCAAATTCGTTATCCACTGACACGACCACCGACCTCGACGAGCAG
ATCTCGCAGCTCATGCAGTGCAAGCCTCTCTCCGAACCACAGGTTAAAGC
ATTATGCGAGAAGGCTAAGGAGATATTGATGGAAGAAAGCAATGTACAGC
CTGTGAAAAGTCCAGTGACAATTTGTGGCGATATTCATGGGCAGTTTCAT
GATCTTGCAGAACTTTTTCAAATTGGCGGGAAGTGTCCAGATACCAATTA
CTTGTTTATGGGAGATTATGTGGACCGTGGGTATTATTCTGTTGAAACAG
TTACGCTCTTAGTGGCCTTGAAGGTGCGGTATCCTCAGCGGATCACTATT
CTTAGAGGAAACCATGAGAGTCGTCAGATTACTCAAGTTTATGGATTCTA
TGATGAATGTCTACGGAAGTATGGCAATGCTAACATTTGGAAGATTTTTA
CTGACCTTTTTGACTACTTTCCGTTGACTGCCTTGGTAGAGTCAGAAATA
TTCTGTCTGCATGGTGGGCTGTCCCCCTTCATTGAACACTTGATATAT
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