FC875311
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875311 vs. ExPASy Swiss-Prot
Match: RL83_ARATH (60S ribosomal protein L8-3 OS=Arabidopsis thaliana GN=RPL8C PE=2 SV=2) HSP 1 Score: 423.32 bits (1087), Expect = 5.862e-118 Identity = 194/215 (90.23%), Postives = 210/215 (97.67%), Query Frame = 3 Query: 21 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGSN 665 MGRVIRAQRKGAGSVFKSHTHHRKGPA+FRSLDFGERNGYLKGVV EIIHDPGRGAPLARV FRHPFR+ KQKELF+AAEGMYTGQF+YCGKKATL+VGNVLP+RSIPEGAV+CNVEHHVGDRGV ARASGDYA++I+HNPDNDT+R+KLPSG+KKI+PSGCRAMIGQVAGGGRTEKP+LKAGNAYHK+RVKRNCWPKVRGVAMNPVEHPHGG N Sbjct: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVAFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVICNVEHHVGDRGVFARASGDYAIVIAHNPDNDTSRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGN 215
BLAST of FC875311 vs. ExPASy Swiss-Prot
Match: RL81_ARATH (60S ribosomal protein L8-1 OS=Arabidopsis thaliana GN=RPL8A PE=2 SV=2) HSP 1 Score: 422.935 bits (1086), Expect = 7.656e-118 Identity = 196/215 (91.16%), Postives = 211/215 (98.14%), Query Frame = 3 Query: 21 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGSN 665 MGRVIRAQRKGAGSVFKSHTHHRKGPA+FRSLDFGERNGYLKGVV EIIHDPGRGAPLARVTFRHPFR+ KQKELF+AAEGMYTGQF+YCGKKATL+VGNVLP+RSIPEGAVVCNVEHHVGDRGVLARASGDYA++I+HNPD+DTTR+KLPSG+KKI+PSGCRAMIGQVAGGGRTEKP+LKAGNAYHK+RVKRN WPKVRGVAMNPVEHPHGG N Sbjct: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVTFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVLARASGDYAIVIAHNPDSDTTRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKYRVKRNSWPKVRGVAMNPVEHPHGGGN 215
BLAST of FC875311 vs. ExPASy Swiss-Prot
Match: RL8_SOLLC (60S ribosomal protein L8 OS=Solanum lycopersicum GN=RPL8 PE=2 SV=1) HSP 1 Score: 422.165 bits (1084), Expect = 1.306e-117 Identity = 196/215 (91.16%), Postives = 207/215 (96.28%), Query Frame = 3 Query: 21 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGSN 665 MGRVIRAQRKGAGSVFKSHTHHRKGPA+FR+LDFGERNGYLKGV+ E+IHDPGRGAPLARVTFRHPFRY QKELF+AAEGMYTGQFVYCGKKATLMVGNVLP+RSIPEGAVVCNVEH VGDRGV AR SGDYA++ISHNPDN TTRVKLPSGAKKI+PSGCRAMIGQVAGGGRTEKP+LKAGNAYHK+RVKRNCWPKVRGVAMNPVEHPHGG N Sbjct: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRTLDFGERNGYLKGVITEVIHDPGRGAPLARVTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKATLMVGNVLPLRSIPEGAVVCNVEHKVGDRGVFARCSGDYAIVISHNPDNGTTRVKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGN 215
BLAST of FC875311 vs. ExPASy Swiss-Prot
Match: RL8_TOBAC (60S ribosomal protein L8 OS=Nicotiana tabacum GN=RPL8 PE=2 SV=1) HSP 1 Score: 412.92 bits (1060), Expect = 7.922e-115 Identity = 191/215 (88.84%), Postives = 205/215 (95.35%), Query Frame = 3 Query: 21 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGSN 665 MGR+IRAQRKGAGSVFKSHTHHRKGPA+FRSLDFGERNGYLKGV+ E+IHDPGRGAPLARVTFR+PFRY QKELF+AAEGMYTGQFVYCGKKATLMVGNVLP+RSIPEGAVVCNVEH VGDRGV AR SG YA++ISHNPDN TTR+KLPSG+KKI+PSGCR MIGQVAGGGRTEKP+LKAGNAYHK+RVKRNCWPKVRGVAMNPVEHPHGG N Sbjct: 1 MGRLIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEVIHDPGRGAPLARVTFRYPFRYNHQKELFVAAEGMYTGQFVYCGKKATLMVGNVLPLRSIPEGAVVCNVEHKVGDRGVFARCSGAYAIVISHNPDNGTTRIKLPSGSKKIVPSGCRRMIGQVAGGGRTEKPMLKAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGN 215
BLAST of FC875311 vs. ExPASy Swiss-Prot
Match: RL82_ARATH (60S ribosomal protein L8-2 OS=Arabidopsis thaliana GN=RPL8B PE=2 SV=2) HSP 1 Score: 399.438 bits (1025), Expect = 9.064e-111 Identity = 186/216 (86.11%), Postives = 204/216 (94.44%), Query Frame = 3 Query: 21 MGRVIRAQRKGA-GSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGSN 665 MGRVIRAQRKGA GSVFKSHTHHRKGPA+FRSLD+GERNGYLKG+V EIIHDPGRGAPLARV FRHPFRYMKQKELF+AAEGMYTGQ++YCGKKA LMVGNVLP+ SIPEGAV+CNVE HVGDRG LARASGDYA++I+HNP+++TTRVKLPSG+KKI+PS CRAMIGQVAGGGRTEKP LKAGNAYHK++ KRNCWP VRGVAMNPVEHPHGG N Sbjct: 1 MGRVIRAQRKGAAGSVFKSHTHHRKGPAKFRSLDYGERNGYLKGLVTEIIHDPGRGAPLARVAFRHPFRYMKQKELFVAAEGMYTGQYLYCGKKANLMVGNVLPLGSIPEGAVICNVELHVGDRGALARASGDYAIVIAHNPESNTTRVKLPSGSKKILPSACRAMIGQVAGGGRTEKPFLKAGNAYHKYKAKRNCWPVVRGVAMNPVEHPHGGGN 216
BLAST of FC875311 vs. ExPASy Swiss-Prot
Match: RL8_ANOGA (60S ribosomal protein L8 OS=Anopheles gambiae GN=RpL8 PE=2 SV=2) HSP 1 Score: 336.265 bits (861), Expect = 9.424e-92 Identity = 156/215 (72.56%), Postives = 181/215 (84.19%), Query Frame = 3 Query: 21 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGSN 665 MGRVIRAQRKGAGSVF++HT RKG + R LD+ ER+GYLKGVV +IIHDPGRGAPLA V FR P+R+ K+LFIAAEGMYTGQFVYCG++A L +GNVLP+ +PEG +VCN+E GDRG LAR SG+YA +I+HNPD TRVKLPSGAKK++PS RAMIG VAGGGR +KP+LKAG AYHK++VKRNCWPKVRGVAMNPVEHPHGG N Sbjct: 1 MGRVIRAQRKGAGSVFRAHTKKRKGEPKLRHLDYAERHGYLKGVVKQIIHDPGRGAPLAVVNFRDPYRFRLSKQLFIAAEGMYTGQFVYCGRRAQLQIGNVLPIGLMPEGTIVCNLEEKTGDRGKLARTSGNYASVIAHNPDTKRTRVKLPSGAKKVLPSANRAMIGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPKVRGVAMNPVEHPHGGGN 215
BLAST of FC875311 vs. ExPASy Swiss-Prot
Match: RL8_SPOFR (60S ribosomal protein L8 OS=Spodoptera frugiperda GN=RpL8 PE=2 SV=1) HSP 1 Score: 333.954 bits (855), Expect = 4.677e-91 Identity = 156/215 (72.56%), Postives = 182/215 (84.65%), Query Frame = 3 Query: 21 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGSN 665 MGRVIRAQRKGAGSVF SHT RKG + RSLD+ ER+GY+KGVV +IIHDPGRGAPLA V FR P+++ +KELFIA EG+YTGQFVYCGKKATL VGNV+PV ++PEG +VCN+E +GDRG LARASG++A +I HNPD TRVKLPSGAKK++PS R M+G VAGGGR +KP+LKAG AYHK++VKRNCWP VRGVAMNPVEHPHGG N Sbjct: 1 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGN 215
BLAST of FC875311 vs. ExPASy Swiss-Prot
Match: RL8_MAMBR (60S ribosomal protein L8 OS=Mamestra brassicae GN=RpL8 PE=2 SV=1) HSP 1 Score: 333.954 bits (855), Expect = 4.677e-91 Identity = 156/215 (72.56%), Postives = 182/215 (84.65%), Query Frame = 3 Query: 21 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGSN 665 MGRVIRAQRKGAGSVF SHT RKG + RSLD+ ER+GY+KGVV +IIHDPGRGAPLA V FR P+++ +KELFIA EG+YTGQFVYCGKKATL VGNV+PV ++PEG +VCN+E +GDRG LARASG++A +I HNPD TRVKLPSGAKK++PS R M+G VAGGGR +KP+LKAG AYHK++VKRNCWP VRGVAMNPVEHPHGG N Sbjct: 1 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGN 215
BLAST of FC875311 vs. ExPASy Swiss-Prot
Match: RL8_DROME (60S ribosomal protein L8 OS=Drosophila melanogaster GN=RpL8 PE=2 SV=1) HSP 1 Score: 332.798 bits (852), Expect = 1.042e-90 Identity = 154/215 (71.63%), Postives = 181/215 (84.19%), Query Frame = 3 Query: 21 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGSN 665 MGRVIRAQRKGAGSVFK+H RKG A+ RSLDF ER+GY++GVV +IIHDPGRGAPLA V FR P+RY +KELFIA EGM+TGQFVYCG+KATL +GNV+P+ +PEG ++CN+E GDRG LAR SG+YA +I+HN D TRVKLPSGAKK++PS RAM+G VAGGGR +KP+LKAG AYHK++VKRN WPKVRGVAMNPVEHPHGG N Sbjct: 1 MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAVVHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRLARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNSWPKVRGVAMNPVEHPHGGGN 215
BLAST of FC875311 vs. ExPASy Swiss-Prot
Match: RL8_XENLA (60S ribosomal protein L8 OS=Xenopus laevis GN=rpl8 PE=2 SV=3) HSP 1 Score: 332.028 bits (850), Expect = 1.777e-90 Identity = 152/215 (70.70%), Postives = 182/215 (84.65%), Query Frame = 3 Query: 21 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGSN 665 MGRVIR QRKGAGSVFK+H HRKG A+ R++DF ERNGY+KG+V +IIHDPGRGAPLA+V FR P+R+ K+ ELF+AAEG++TGQFVYCGKKA L +GNVLPV ++PEG +VC VE GDRG LARASG+YA +ISHNP+ TRVKLPSG+KK+I S RA++G VAGGGR +KP+LKAG AYHK++ KRNCWP+VRGVAMNPVEHP GG N Sbjct: 1 MGRVIRGQRKGAGSVFKAHVKHRKGAAKLRAIDFAERNGYIKGIVKDIIHDPGRGAPLAKVAFRDPYRFKKRTELFVAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCVEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAIVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGN 215 The following BLAST results are available for this feature:
BLAST of FC875311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875311 ID=FC875311; Name=FC875311; organism=Citrus clementina; type=EST; length=690bpback to top |