FC875314
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_PROVI (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=ispF PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.840e-24 Identity = 51/125 (40.80%), Postives = 80/125 (64.00%), Query Frame = 1 Query: 316 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELLGADPPL 690 R+G G D+H + G LI+GG+++P +G + HSD DVLLH V DA+LGA L DIG FPD+ P++K S + +K +L+++ G+ N+DA L+L PK++P+ +R N++ L + L Sbjct: 2 RIGIGIDVHSFKEGRKLIVGGVDIPSPKGLDGHSDADVLLHAVSDALLGAAALGDIGLHFPDTSPEFKDIDSMILLKHVGKLLEKNGWRTVNVDAMLLLEAPKIAPFVVDMRKNIARCLQIETDL 126
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPDF_WOLSU (Bifunctional enzyme ispD/ispF OS=Wolinella succinogenes GN=ispDF PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.840e-24 Identity = 51/117 (43.59%), Postives = 76/117 (64.96%), Query Frame = 1 Query: 322 GHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELL 672 G GFD+H G L + G+N+P +AHSDGDV +H ++DA+LGA G DIG+ FPDSD +KG S++ ++E ++ + G+E+ N D T++ PKLSPYKE + L E++ Sbjct: 216 GSGFDVHAFMEGEGLRLAGVNIPAPVTFKAHSDGDVAIHALIDALLGAAGAGDIGEWFPDSDLAYKGVDSTLLLQEVIKFIRGIGFELINADLTIMAQAPKLSPYKEAMERRLGEVM 332
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPDF_WOLPM (Bifunctional enzyme ispD/ispF OS=Wolbachia pipientis wMel GN=ispDF PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.840e-24 Identity = 57/128 (44.53%), Postives = 78/128 (60.94%), Query Frame = 1 Query: 313 FRVGHGFDLHR---LEPGYPLIIG--GINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELLGAD 681 FRVG G+D+H+ ++ G I G+ + H EAHSDGDV +H +VDAILGALG DIG+ FP S +WK SS F+ A + E GY + NLD T++ PK+SPYK ++ +S+ L D Sbjct: 232 FRVGAGYDIHKFIKVQNGAESFIKICGVKIEHNMAIEAHSDGDVAIHAIVDAILGALGCGDIGEHFPPSSSEWKDCNSSHFLDFAAKKAKEKGYSVSNLDITIVCEEPKISPYKVEMKKFISKALEID 359
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPDF_HELPG (Bifunctional enzyme ispD/ispF OS=Helicobacter pylori (strain G27) GN=ispDF PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.840e-24 Identity = 53/121 (43.80%), Postives = 77/121 (63.64%), Query Frame = 1 Query: 319 VGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELLGAD 681 +G GFD H P+++GG+ + E G +AHSDGD LLH V+DA+LGA+ DIG+ FPD+DPK+K A S +K + G+E+ + AT+ PK++PYK I +LS+LLG + Sbjct: 249 IGMGFDTHAFIKDKPMVLGGVVLDCEFGLKAHSDGDALLHAVIDAVLGAIKGGDIGEWFPDNDPKYKNASSKELLKVVLDFSQSIGFELLEMGATIFSEIPKITPYKPAILESLSQLLGLE 369
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPDF_CAMC5 (Bifunctional enzyme ispD/ispF OS=Campylobacter curvus (strain 525.92) GN=ispDF PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.840e-24 Identity = 53/121 (43.80%), Postives = 77/121 (63.64%), Query Frame = 1 Query: 322 GHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELLGADP 684 G GFD H E G L + G + +E G +AHSDGDV LH + DAILGA GL DIG++FPD+D ++KG S + ++EA + + G+E+ N D T++ RPK+S +K + N++ L P Sbjct: 214 GIGFDAHEFERGRELWLCGEKIEYEFGLKAHSDGDVALHALTDAILGAAGLGDIGELFPDTDAEFKGISSLLLLQEAYKKVQSVGFELVNADITIMAERPKISKFKRKMEANIAGALNLAP 334
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_GLOVI (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Gloeobacter violaceus GN=ispF PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.016e-24 Identity = 50/120 (41.67%), Postives = 76/120 (63.33%), Query Frame = 1 Query: 316 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELLG 675 R+G+G+D HRL G LI+GG+ +P+ G HSD D+L H + DA+LGA L DIG+ FP DP+W+ S + + + + L+ G + N+DA ++ RPKL+P+ IR +L+ LG Sbjct: 9 RIGNGYDFHRLVEGRRLILGGVEIPYRLGLLGHSDADLLTHAITDALLGAACLGDIGRHFPPGDPQWQDVSSLLLLSKVLELVRGRGLRLSNVDAVVVAERPKLAPHIPAIRQSLAGALG 128
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPDF_CAMHC (Bifunctional enzyme ispD/ispF OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=ispDF PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.016e-24 Identity = 51/117 (43.59%), Postives = 76/117 (64.96%), Query Frame = 1 Query: 322 GHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELL 672 G+GFD+H G + +GG+ +P E HSD D +H ++DAILGA GL DIG++FPD+D +KG S + +++ V + G++I N D T+I +PK+SPYKE + LSE+L Sbjct: 215 GNGFDVHAFAKGEFITLGGVKIPCEYSLVGHSDADAAIHALMDAILGACGLGDIGELFPDTDDSFKGIDSKILLQKVVNFVHLLGFKIINADITIIAQKPKISPYKEKMCEILSEIL 331
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPDF_CAMFF (Bifunctional enzyme ispD/ispF OS=Campylobacter fetus subsp. fetus (strain 82-40) GN=ispDF PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.016e-24 Identity = 48/118 (40.68%), Postives = 79/118 (66.95%), Query Frame = 1 Query: 322 GHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELLG 675 G+GFD+H + G + + G+ +P+ + AHSDGDV LH + DA+LGA PDIG+++PD+D K+K S + ++ +V L+ G++I N D T+I PK+SPYK+ + ++++LG Sbjct: 213 GNGFDVHAFKEGDFITLCGVKIPYSKAFIAHSDGDVALHALCDALLGAASAPDIGELYPDNDSKFKDIDSKILLQNSVNLIRSIGFDIINADITIIAQSPKISPYKDAMAKIVADILG 330
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPDF_BARHE (Bifunctional enzyme ispD/ispF OS=Bartonella henselae GN=ispDF PE=3 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 6.550e-24 Identity = 50/119 (42.02%), Postives = 72/119 (60.50%), Query Frame = 1 Query: 316 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELL 672 R G+G+D+H E G LI+ GI +P + HSD DV LH + DA+L G DIG FP SDP+W+ S +F++ A+ ++ +AG I N+D TLI PK+ PY+ + NL +L Sbjct: 237 RTGNGYDVHSFEEGNSLILCGIKIPFHKKLNGHSDADVALHALTDALLATRGAGDIGTHFPPSDPQWQNVSSEIFLRHALDIVKQAGGRIANVDITLIAEEPKIGPYRHAMVGNLMNML 355
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPDF_WOLTR (Bifunctional enzyme ispD/ispF OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=ispDF PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.555e-24 Identity = 57/128 (44.53%), Postives = 77/128 (60.16%), Query Frame = 1 Query: 313 FRVGHGFDLHRLEPGYP-----LIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELLGAD 681 +RVG G+D+HR + I G+ + ++ EAHSDGDV +H VVDAILGALG DIG FP S P+WK SS F+ A + E GY + NLD T++ PK+SPYK ++ +S+ L D Sbjct: 239 YRVGTGYDIHRFIKAQGKAKSFIKICGVEIEYDMKIEAHSDGDVAIHAVVDAILGALGCGDIGAHFPPSFPEWKDRNSSHFLDFAAKKAKEKGYSVSNLDITIVCEEPKISPYKVAMKKFISKTLEID 366 The following BLAST results are available for this feature:
BLAST of FC875314 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875314 ID=FC875314; Name=FC875314; organism=Citrus clementina; type=EST; length=694bpback to top |